RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 GGNBP2Q9H3C7 697 aa24.12■■□□□ 1.45
PPFIA3-202ENST00000421230 TNNT2P45379 298 aaPredicted RBP24.12■■□□□ 1.45
PPFIA3-202ENST00000421230 BRD4O60885 1362 aaPredicted RBP24.12■■□□□ 1.45
PPFIA3-202ENST00000421230 TMEM94Q12767 1356 aa24.11■■□□□ 1.45
PPFIA3-202ENST00000421230 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
PPFIA3-202ENST00000421230 ZNF335Q9H4Z2 1342 aaPredicted RBP24.11■■□□□ 1.45
PPFIA3-202ENST00000421230 FYB1O15117 783 aa24.11■■□□□ 1.45
PPFIA3-202ENST00000421230 ANKARQ7Z5J8 1434 aa24.1■■□□□ 1.45
PPFIA3-202ENST00000421230 NUDCQ9Y266 331 aa24.1■■□□□ 1.45
PPFIA3-202ENST00000421230 MON2Q7Z3U7 1717 aa24.09■■□□□ 1.45
PPFIA3-202ENST00000421230 ZNF692Q9BU19 519 aaPredicted RBP24.08■■□□□ 1.45
PPFIA3-202ENST00000421230 EDC4Q6P2E9 1401 aaKnown RBP24.08■■□□□ 1.44
PPFIA3-202ENST00000421230 NSD2O96028 1365 aa24.08■■□□□ 1.44
PPFIA3-202ENST00000421230 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-202ENST00000421230 C19orf44Q9H6X5 657 aa24.07■■□□□ 1.44
PPFIA3-202ENST00000421230 KIF20BQ96Q89 1820 aa24.06■■□□□ 1.44
PPFIA3-202ENST00000421230 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
PPFIA3-202ENST00000421230 PNISRQ8TF01 805 aaKnown RBP24.06■■□□□ 1.44
PPFIA3-202ENST00000421230 NME9Q86XW9 330 aa24.04■■□□□ 1.44
PPFIA3-202ENST00000421230 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
PPFIA3-202ENST00000421230 ESCO1Q5FWF5 840 aa24.03■■□□□ 1.44
PPFIA3-202ENST00000421230 ZRANB1Q9UGI0 708 aa24.03■■□□□ 1.44
PPFIA3-202ENST00000421230 POLR3AO14802 1390 aaPredicted RBP24.03■■□□□ 1.44
PPFIA3-202ENST00000421230 USP6P35125 1406 aa24.03■■□□□ 1.44
PPFIA3-202ENST00000421230 PHF8Q9UPP1 1060 aa24.02■■□□□ 1.44
PPFIA3-202ENST00000421230 ANKRD26Q9UPS8 1709 aa24.02■■□□□ 1.44
PPFIA3-202ENST00000421230 XIRP1Q702N8 1843 aaKnown RBP24.01■■□□□ 1.43
PPFIA3-202ENST00000421230 TTC21BQ7Z4L5 1316 aa24.01■■□□□ 1.43
PPFIA3-202ENST00000421230 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
PPFIA3-202ENST00000421230 NRKQ7Z2Y5 1582 aa24■■□□□ 1.43
PPFIA3-202ENST00000421230 ATF3P18847 181 aa24■■□□□ 1.43
PPFIA3-202ENST00000421230 ORAI2Q96SN7 254 aa24■■□□□ 1.43
PPFIA3-202ENST00000421230 NCOA3Q9Y6Q9 1424 aa24■■□□□ 1.43
PPFIA3-202ENST00000421230 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
PPFIA3-202ENST00000421230 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
PPFIA3-202ENST00000421230 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
PPFIA3-202ENST00000421230 FBLN1P23142 703 aa23.96■■□□□ 1.43
PPFIA3-202ENST00000421230 MTHFSP49914 203 aa23.96■■□□□ 1.43
PPFIA3-202ENST00000421230 MSH6P52701 1360 aa23.95■■□□□ 1.43
PPFIA3-202ENST00000421230 C1orf167Q5SNV9 1468 aa23.95■■□□□ 1.42
PPFIA3-202ENST00000421230 ANP32AP39687 249 aaKnown RBP23.95■■□□□ 1.42
PPFIA3-202ENST00000421230 COG3Q96JB2 828 aa23.94■■□□□ 1.42
PPFIA3-202ENST00000421230 NBR1Q14596 966 aa23.93■■□□□ 1.42
PPFIA3-202ENST00000421230 DCCP43146 1447 aa23.93■■□□□ 1.42
PPFIA3-202ENST00000421230 MST1RQ04912 1400 aa23.93■■□□□ 1.42
PPFIA3-202ENST00000421230 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
PPFIA3-202ENST00000421230 FOXO3O43524 673 aa23.92■■□□□ 1.42
PPFIA3-202ENST00000421230 SENP3-EIF4A1A0A087X0R7 540 aa23.91■■□□□ 1.42
PPFIA3-202ENST00000421230 PSME1Q06323 249 aa23.91■■□□□ 1.42
PPFIA3-202ENST00000421230 TTC21AQ8NDW8 1320 aa23.9■■□□□ 1.42
PPFIA3-202ENST00000421230 XPCQ01831 940 aaPredicted RBP23.9■■□□□ 1.42
PPFIA3-202ENST00000421230 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
PPFIA3-202ENST00000421230 ADAMTS8Q9UP79 889 aa23.88■■□□□ 1.41
PPFIA3-202ENST00000421230 WDR43Q15061 677 aaKnown RBP eCLIP23.87■■□□□ 1.41
PPFIA3-202ENST00000421230 PIK3C2AO00443 1686 aa23.87■■□□□ 1.41
PPFIA3-202ENST00000421230 OVOS2A0A0J9YW53 1432 aa23.87■■□□□ 1.41
PPFIA3-202ENST00000421230 OVOS2Q6IE36 1432 aa23.87■■□□□ 1.41
PPFIA3-202ENST00000421230 ZBTB47Q9UFB7 747 aaPredicted RBP23.87■■□□□ 1.41
PPFIA3-202ENST00000421230 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
PPFIA3-202ENST00000421230 PPM1GO15355 546 aaPredicted RBP23.86■■□□□ 1.41
PPFIA3-202ENST00000421230 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
PPFIA3-202ENST00000421230 ABTB2Q8N961 1025 aa23.85■■□□□ 1.41
PPFIA3-202ENST00000421230 SOX12O15370 315 aa23.84■■□□□ 1.41
PPFIA3-202ENST00000421230 CFAP53Q96M91 514 aa23.84■■□□□ 1.41
PPFIA3-202ENST00000421230 NLRP6P59044 892 aa23.84■■□□□ 1.41
PPFIA3-202ENST00000421230 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
PPFIA3-202ENST00000421230 KIF1AQ12756 1690 aa23.83■■□□□ 1.41
PPFIA3-202ENST00000421230 RRS1Q15050 365 aaKnown RBP23.83■■□□□ 1.41
PPFIA3-202ENST00000421230 EMILIN1Q9Y6C2 1016 aa23.83■■□□□ 1.41
PPFIA3-202ENST00000421230 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
PPFIA3-202ENST00000421230 SHPRHQ149N8 1683 aa23.82■■□□□ 1.4
PPFIA3-202ENST00000421230 KRT28Q7Z3Y7 464 aa23.81■■□□□ 1.4
PPFIA3-202ENST00000421230 AATKQ6ZMQ8 1374 aa23.8■■□□□ 1.4
PPFIA3-202ENST00000421230 USP31Q70CQ4 1352 aa23.8■■□□□ 1.4
PPFIA3-202ENST00000421230 SLAIN2Q9P270 581 aa23.8■■□□□ 1.4
PPFIA3-202ENST00000421230 MARF1Q9Y4F3 1742 aaKnown RBP23.78■■□□□ 1.4
PPFIA3-202ENST00000421230 COL3A1P02461 1466 aaPredicted RBP23.78■■□□□ 1.4
PPFIA3-202ENST00000421230 LTBP4Q8N2S1 1624 aa23.78■■□□□ 1.4
PPFIA3-202ENST00000421230 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-202ENST00000421230 RRP1P56182 461 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-202ENST00000421230 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
PPFIA3-202ENST00000421230 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
PPFIA3-202ENST00000421230 RTL5Q5HYW3 569 aaPredicted RBP23.76■■□□□ 1.39
PPFIA3-202ENST00000421230 CCDC146Q8IYE0 955 aa23.76■■□□□ 1.39
PPFIA3-202ENST00000421230 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
PPFIA3-202ENST00000421230 TRPM3Q9HCF6 1732 aaPredicted RBP23.76■■□□□ 1.39
PPFIA3-202ENST00000421230 TCERG1O14776 1098 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-202ENST00000421230 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
PPFIA3-202ENST00000421230 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
PPFIA3-202ENST00000421230 U2SURPO15042 1029 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-202ENST00000421230 DIAPH1O60610 1272 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-202ENST00000421230 NPHP3Q7Z494 1330 aa23.73■■□□□ 1.39
PPFIA3-202ENST00000421230 INSRP06213 1382 aa23.73■■□□□ 1.39
PPFIA3-202ENST00000421230 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
PPFIA3-202ENST00000421230 U2AF1L5P0DN76 240 aaPredicted RBP23.72■■□□□ 1.39
PPFIA3-202ENST00000421230 U2AF1Q01081 240 aaKnown RBP eCLIP23.72■■□□□ 1.39
PPFIA3-202ENST00000421230 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
PPFIA3-202ENST00000421230 CDK12Q9NYV4 1490 aaPredicted RBP23.71■■□□□ 1.39
PPFIA3-202ENST00000421230 MAP3K19Q56UN5 1328 aa23.71■■□□□ 1.39
PPFIA3-202ENST00000421230 PEAK1Q9H792 1746 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms