RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 USP6P35125 1406 aa16.8■□□□□ 0.28
FAAP20-208ENST00000420964 RALBP1Q15311 655 aa16.8■□□□□ 0.28
FAAP20-208ENST00000420964 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
FAAP20-208ENST00000420964 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
FAAP20-208ENST00000420964 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
FAAP20-208ENST00000420964 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
FAAP20-208ENST00000420964 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
FAAP20-208ENST00000420964 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
FAAP20-208ENST00000420964 ROBO1Q9Y6N7 1651 aa16.76■□□□□ 0.27
FAAP20-208ENST00000420964 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
FAAP20-208ENST00000420964 PHF23Q9BUL5 403 aaPredicted RBP16.76■□□□□ 0.27
FAAP20-208ENST00000420964 SSH2Q76I76 1423 aa16.76■□□□□ 0.27
FAAP20-208ENST00000420964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
FAAP20-208ENST00000420964 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
FAAP20-208ENST00000420964 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
FAAP20-208ENST00000420964 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
FAAP20-208ENST00000420964 FYB1O15117 783 aa16.73■□□□□ 0.27
FAAP20-208ENST00000420964 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
FAAP20-208ENST00000420964 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
FAAP20-208ENST00000420964 TTC21AQ8NDW8 1320 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 NME9Q86XW9 330 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 USP54Q70EL1 1684 aa16.72■□□□□ 0.27
FAAP20-208ENST00000420964 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
FAAP20-208ENST00000420964 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
FAAP20-208ENST00000420964 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
FAAP20-208ENST00000420964 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
FAAP20-208ENST00000420964 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
FAAP20-208ENST00000420964 PSME1Q06323 249 aa16.69■□□□□ 0.26
FAAP20-208ENST00000420964 MARF1Q9Y4F3 1742 aaKnown RBP16.69■□□□□ 0.26
FAAP20-208ENST00000420964 FOXO3O43524 673 aa16.68■□□□□ 0.26
FAAP20-208ENST00000420964 BRINP3Q76B58 766 aa16.68■□□□□ 0.26
FAAP20-208ENST00000420964 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
FAAP20-208ENST00000420964 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
FAAP20-208ENST00000420964 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
FAAP20-208ENST00000420964 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
FAAP20-208ENST00000420964 PXDNQ92626 1479 aa16.67■□□□□ 0.26
FAAP20-208ENST00000420964 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
FAAP20-208ENST00000420964 ALS2Q96Q42 1657 aa16.66■□□□□ 0.26
FAAP20-208ENST00000420964 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
FAAP20-208ENST00000420964 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
FAAP20-208ENST00000420964 COG3Q96JB2 828 aa16.66■□□□□ 0.26
FAAP20-208ENST00000420964 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
FAAP20-208ENST00000420964 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
FAAP20-208ENST00000420964 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
FAAP20-208ENST00000420964 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
FAAP20-208ENST00000420964 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
FAAP20-208ENST00000420964 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
FAAP20-208ENST00000420964 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
FAAP20-208ENST00000420964 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
FAAP20-208ENST00000420964 AATKQ6ZMQ8 1374 aa16.62■□□□□ 0.25
FAAP20-208ENST00000420964 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
FAAP20-208ENST00000420964 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
FAAP20-208ENST00000420964 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
FAAP20-208ENST00000420964 AHDC1Q5TGY3 1603 aaPredicted RBP16.6■□□□□ 0.25
FAAP20-208ENST00000420964 NLRP6P59044 892 aa16.6■□□□□ 0.25
FAAP20-208ENST00000420964 NUTM2GQ5VZR2 741 aa16.6■□□□□ 0.25
FAAP20-208ENST00000420964 SLIT3O75094 1523 aa16.59■□□□□ 0.25
FAAP20-208ENST00000420964 MTHFSP49914 203 aa16.58■□□□□ 0.24
FAAP20-208ENST00000420964 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
FAAP20-208ENST00000420964 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
FAAP20-208ENST00000420964 NFAT5O94916 1531 aa16.58■□□□□ 0.24
FAAP20-208ENST00000420964 LRP6O75581 1613 aa16.58■□□□□ 0.24
FAAP20-208ENST00000420964 SHPRHQ149N8 1683 aa16.58■□□□□ 0.24
FAAP20-208ENST00000420964 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
FAAP20-208ENST00000420964 ARHGEF10O15013 1369 aa16.57■□□□□ 0.24
FAAP20-208ENST00000420964 JCADQ9P266 1359 aa16.57■□□□□ 0.24
FAAP20-208ENST00000420964 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
FAAP20-208ENST00000420964 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
FAAP20-208ENST00000420964 USP19O94966 1318 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 LTN1O94822 1766 aa16.56■□□□□ 0.24
FAAP20-208ENST00000420964 SOX12O15370 315 aa16.55■□□□□ 0.24
FAAP20-208ENST00000420964 FBLN1P23142 703 aa16.55■□□□□ 0.24
FAAP20-208ENST00000420964 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
FAAP20-208ENST00000420964 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
FAAP20-208ENST00000420964 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
FAAP20-208ENST00000420964 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
FAAP20-208ENST00000420964 EMILIN1Q9Y6C2 1016 aa16.54■□□□□ 0.24
FAAP20-208ENST00000420964 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
FAAP20-208ENST00000420964 INSRP06213 1382 aa16.52■□□□□ 0.24
FAAP20-208ENST00000420964 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.24
FAAP20-208ENST00000420964 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
FAAP20-208ENST00000420964 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.24
FAAP20-208ENST00000420964 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
FAAP20-208ENST00000420964 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
FAAP20-208ENST00000420964 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
FAAP20-208ENST00000420964 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
FAAP20-208ENST00000420964 FLT4P35916 1363 aa16.5■□□□□ 0.23
FAAP20-208ENST00000420964 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
FAAP20-208ENST00000420964 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
FAAP20-208ENST00000420964 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
FAAP20-208ENST00000420964 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
FAAP20-208ENST00000420964 GCP02774 474 aa16.48■□□□□ 0.23
FAAP20-208ENST00000420964 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms