RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 RRP7AQ9Y3A4 280 aaKnown RBP11.27□□□□□ -0.6
TRIM49D1-201ENST00000420869 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 CT47B1P0C2W7 299 aaPredicted RBP11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.61
TRIM49D1-201ENST00000420869 TECPR2O15040 1411 aa11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 IL16Q14005 1332 aa11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
TRIM49D1-201ENST00000420869 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 FYB1O15117 783 aa11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 TERF2IPQ9NYB0 399 aa11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
TRIM49D1-201ENST00000420869 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 USP19O94966 1318 aa11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 U2AF1L5P0DN76 240 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 RLBP1P12271 317 aa11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 U2AF1Q01081 240 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
TRIM49D1-201ENST00000420869 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 RGS3P49796 1198 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 STK26Q9P289 416 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 TUBGCP6Q96RT7 1819 aa11.23□□□□□ -0.61
TRIM49D1-201ENST00000420869 TNNQ9UQP3 1299 aa11.22□□□□□ -0.61
TRIM49D1-201ENST00000420869 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.61
TRIM49D1-201ENST00000420869 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
TRIM49D1-201ENST00000420869 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 CDK19Q9BWU1 502 aa11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 POGKQ9P215 609 aa11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 LAS1LQ9Y4W2 734 aaKnown RBP11.2□□□□□ -0.62
TRIM49D1-201ENST00000420869 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
TRIM49D1-201ENST00000420869 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
TRIM49D1-201ENST00000420869 FAM69CQ0P6D2 419 aa11.18□□□□□ -0.62
TRIM49D1-201ENST00000420869 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
TRIM49D1-201ENST00000420869 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 NEFMP07197 916 aa11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 EXOSC9Q06265 439 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 TSR2Q969E8 191 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 PNNQ9H307 717 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 PDZRN3Q9UPQ7 1066 aa11.17□□□□□ -0.62
TRIM49D1-201ENST00000420869 METP08581 1390 aa11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 PIK3R4Q99570 1358 aa11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 FCHSD2O94868 740 aa11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
TRIM49D1-201ENST00000420869 PIK3C2AO00443 1686 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 TRIM27P14373 513 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 SSH1Q8WYL5 1049 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
TRIM49D1-201ENST00000420869 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 LTN1O94822 1766 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 AK9Q5TCS8 1911 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 SEC24BO95487 1268 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 RIPK4P57078 832 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
TRIM49D1-201ENST00000420869 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
TRIM49D1-201ENST00000420869 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms