RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
ECHDC3-202ENST00000420401 EVC2Q86UK5 1308 aa25.74■■□□□ 1.71
ECHDC3-202ENST00000420401 SEPT12Q8IYM1 358 aa25.74■■□□□ 1.71
ECHDC3-202ENST00000420401 CCDC9Q9Y3X0 531 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-202ENST00000420401 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
ECHDC3-202ENST00000420401 PLEKHG5O94827 1062 aa25.73■■□□□ 1.71
ECHDC3-202ENST00000420401 CCDC61Q9Y6R9 512 aa25.73■■□□□ 1.71
ECHDC3-202ENST00000420401 NGDNQ8NEJ9 315 aaKnown RBP25.72■■□□□ 1.71
ECHDC3-202ENST00000420401 ATP7BP35670 1465 aa25.72■■□□□ 1.71
ECHDC3-202ENST00000420401 CABP2Q9NPB3 220 aa25.71■■□□□ 1.71
ECHDC3-202ENST00000420401 VPS72Q15906 364 aa25.7■■□□□ 1.7
ECHDC3-202ENST00000420401 PLCH1Q4KWH8 1693 aa25.7■■□□□ 1.7
ECHDC3-202ENST00000420401 NWD2Q9ULI1 1742 aa25.69■■□□□ 1.7
ECHDC3-202ENST00000420401 LMOD2Q6P5Q4 547 aa25.69■■□□□ 1.7
ECHDC3-202ENST00000420401 CABLES1Q8TDN4 633 aa25.68■■□□□ 1.7
ECHDC3-202ENST00000420401 TNS3Q68CZ2 1445 aa25.67■■□□□ 1.7
ECHDC3-202ENST00000420401 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
ECHDC3-202ENST00000420401 SBNO1A3KN83 1393 aa25.67■■□□□ 1.7
ECHDC3-202ENST00000420401 SBNO2Q9Y2G9 1366 aa25.67■■□□□ 1.7
ECHDC3-202ENST00000420401 A0A0G2JS52 829 aa25.66■■□□□ 1.7
ECHDC3-202ENST00000420401 PLEKHG3A1L390 1219 aa25.66■■□□□ 1.7
ECHDC3-202ENST00000420401 MYT1Q01538 1121 aa25.66■■□□□ 1.7
ECHDC3-202ENST00000420401 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
ECHDC3-202ENST00000420401 SLC24A1O60721 1099 aa25.64■■□□□ 1.7
ECHDC3-202ENST00000420401 LRP5O75197 1615 aa25.63■■□□□ 1.69
ECHDC3-202ENST00000420401 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
ECHDC3-202ENST00000420401 PPIP5K1Q6PFW1 1433 aa25.63■■□□□ 1.69
ECHDC3-202ENST00000420401 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
ECHDC3-202ENST00000420401 BAG6P46379 1132 aa25.62■■□□□ 1.69
ECHDC3-202ENST00000420401 ABCA3Q99758 1704 aa25.62■■□□□ 1.69
ECHDC3-202ENST00000420401 ACEP12821 1306 aa25.62■■□□□ 1.69
ECHDC3-202ENST00000420401 POLR3AO14802 1390 aaPredicted RBP25.61■■□□□ 1.69
ECHDC3-202ENST00000420401 ARHGEF10O15013 1369 aa25.61■■□□□ 1.69
ECHDC3-202ENST00000420401 USP47Q96K76 1375 aa25.6■■□□□ 1.69
ECHDC3-202ENST00000420401 CABP1Q9NZU7 370 aa25.6■■□□□ 1.69
ECHDC3-202ENST00000420401 TOPAZ1Q8N9V7 1692 aa25.59■■□□□ 1.69
ECHDC3-202ENST00000420401 PSDA5PKW4 1024 aaPredicted RBP25.58■■□□□ 1.69
ECHDC3-202ENST00000420401 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.69
ECHDC3-202ENST00000420401 FAM83GA6ND36 823 aa25.57■■□□□ 1.68
ECHDC3-202ENST00000420401 TESK2Q96S53 571 aa25.56■■□□□ 1.68
ECHDC3-202ENST00000420401 FAM98CQ17RN3 349 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-202ENST00000420401 PUS7Q96PZ0 661 aaKnown RBP25.54■■□□□ 1.68
ECHDC3-202ENST00000420401 BTG4Q9NY30 223 aa25.53■■□□□ 1.68
ECHDC3-202ENST00000420401 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.68
ECHDC3-202ENST00000420401 NRAPQ86VF7 1730 aa25.51■■□□□ 1.68
ECHDC3-202ENST00000420401 TRPM3Q9HCF6 1732 aaPredicted RBP25.51■■□□□ 1.68
ECHDC3-202ENST00000420401 ZNF692Q9BU19 519 aaPredicted RBP25.51■■□□□ 1.67
ECHDC3-202ENST00000420401 BRD4O60885 1362 aaPredicted RBP25.5■■□□□ 1.67
ECHDC3-202ENST00000420401 TMF1P82094 1093 aa25.5■■□□□ 1.67
ECHDC3-202ENST00000420401 COL14A1Q05707 1796 aaKnown RBP25.49■■□□□ 1.67
ECHDC3-202ENST00000420401 EN1Q05925 392 aaPredicted RBP25.48■■□□□ 1.67
ECHDC3-202ENST00000420401 TMC1Q8TDI8 760 aa25.48■■□□□ 1.67
ECHDC3-202ENST00000420401 CDCA8Q53HL2 280 aa25.46■■□□□ 1.67
ECHDC3-202ENST00000420401 ABTB2Q8N961 1025 aa25.46■■□□□ 1.67
ECHDC3-202ENST00000420401 ALS2Q96Q42 1657 aa25.45■■□□□ 1.67
ECHDC3-202ENST00000420401 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
ECHDC3-202ENST00000420401 FAM182BQ5T319 152 aa25.45■■□□□ 1.66
ECHDC3-202ENST00000420401 USP6P35125 1406 aa25.45■■□□□ 1.66
ECHDC3-202ENST00000420401 R3HDM1Q15032 1099 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-202ENST00000420401 NUTM2GQ5VZR2 741 aa25.42■■□□□ 1.66
ECHDC3-202ENST00000420401 HDGFL2Q7Z4V5 671 aaPredicted RBP25.42■■□□□ 1.66
ECHDC3-202ENST00000420401 SLC12A5Q9H2X9 1139 aa25.42■■□□□ 1.66
ECHDC3-202ENST00000420401 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-202ENST00000420401 TERF2IPQ9NYB0 399 aa25.41■■□□□ 1.66
ECHDC3-202ENST00000420401 KTN1Q86UP2 1357 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-202ENST00000420401 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
ECHDC3-202ENST00000420401 SPATA31A5Q5VU36 1347 aa25.4■■□□□ 1.66
ECHDC3-202ENST00000420401 SPATA31A7Q8IWB4 1347 aa25.4■■□□□ 1.66
ECHDC3-202ENST00000420401 NLRP13Q86W25 1043 aa25.4■■□□□ 1.66
ECHDC3-202ENST00000420401 PRDM11Q9NQV5 511 aa25.39■■□□□ 1.66
ECHDC3-202ENST00000420401 SSH2Q76I76 1423 aa25.38■■□□□ 1.65
ECHDC3-202ENST00000420401 TNS1Q9HBL0 1735 aaKnown RBP25.38■■□□□ 1.65
ECHDC3-202ENST00000420401 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
ECHDC3-202ENST00000420401 HSPA5P11021 654 aaKnown RBP25.37■■□□□ 1.65
ECHDC3-202ENST00000420401 TTC21AQ8NDW8 1320 aa25.37■■□□□ 1.65
ECHDC3-202ENST00000420401 NLRP6P59044 892 aa25.36■■□□□ 1.65
ECHDC3-202ENST00000420401 THSD7AQ9UPZ6 1657 aa25.36■■□□□ 1.65
ECHDC3-202ENST00000420401 EZH2Q15910 746 aaKnown RBP25.35■■□□□ 1.65
ECHDC3-202ENST00000420401 CRYBG1Q9Y4K1 1723 aa25.34■■□□□ 1.65
ECHDC3-202ENST00000420401 AKAP12Q02952 1782 aa25.34■■□□□ 1.65
ECHDC3-202ENST00000420401 DISP2A7MBM2 1401 aa25.34■■□□□ 1.65
ECHDC3-202ENST00000420401 CD163L1Q9NR16 1453 aa25.34■■□□□ 1.65
ECHDC3-202ENST00000420401 USP19O94966 1318 aa25.33■■□□□ 1.64
ECHDC3-202ENST00000420401 FAM196AQ6ZSG2 479 aa25.32■■□□□ 1.64
ECHDC3-202ENST00000420401 A0A1W2PP64 1363 aa25.31■■□□□ 1.64
ECHDC3-202ENST00000420401 TRIM37O94972 964 aa25.31■■□□□ 1.64
ECHDC3-202ENST00000420401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.31■■□□□ 1.64
ECHDC3-202ENST00000420401 STRN4Q9NRL3 753 aa25.31■■□□□ 1.64
ECHDC3-202ENST00000420401 GCP02774 474 aa25.3■■□□□ 1.64
ECHDC3-202ENST00000420401 ZC3H6P61129 1189 aaKnown RBP25.29■■□□□ 1.64
ECHDC3-202ENST00000420401 SPATA31A1Q5TZJ5 1347 aa25.29■■□□□ 1.64
ECHDC3-202ENST00000420401 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
ECHDC3-202ENST00000420401 APBA3O96018 575 aa25.28■■□□□ 1.64
ECHDC3-202ENST00000420401 CAMKK2Q96RR4 588 aa25.28■■□□□ 1.64
ECHDC3-202ENST00000420401 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
ECHDC3-202ENST00000420401 ANKRD36BQ8N2N9 1353 aa25.28■■□□□ 1.64
ECHDC3-202ENST00000420401 KIAA0232Q92628 1395 aa25.28■■□□□ 1.64
ECHDC3-202ENST00000420401 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
ECHDC3-202ENST00000420401 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
ECHDC3-202ENST00000420401 NRKQ7Z2Y5 1582 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms