RNA–Protein interactions for RNA: ENST00000420296.1

NDUFA3-207, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-207ENST00000420296 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
NDUFA3-207ENST00000420296 NGDNQ8NEJ9 315 aaKnown RBP13.23□□□□□ -0.29
NDUFA3-207ENST00000420296 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
NDUFA3-207ENST00000420296 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
NDUFA3-207ENST00000420296 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
NDUFA3-207ENST00000420296 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
NDUFA3-207ENST00000420296 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
NDUFA3-207ENST00000420296 NRKQ7Z2Y5 1582 aa13.22□□□□□ -0.29
NDUFA3-207ENST00000420296 VPS72Q15906 364 aa13.21□□□□□ -0.29
NDUFA3-207ENST00000420296 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
NDUFA3-207ENST00000420296 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.3
NDUFA3-207ENST00000420296 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
NDUFA3-207ENST00000420296 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
NDUFA3-207ENST00000420296 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
NDUFA3-207ENST00000420296 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
NDUFA3-207ENST00000420296 ACEP12821 1306 aa13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 KIAA0232Q92628 1395 aa13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
NDUFA3-207ENST00000420296 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 RGPD1P0DJD0 1748 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 A0A0G2JS52 829 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 MYT1Q01538 1121 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 FAM182BQ5T319 152 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
NDUFA3-207ENST00000420296 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
NDUFA3-207ENST00000420296 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
NDUFA3-207ENST00000420296 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
NDUFA3-207ENST00000420296 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
NDUFA3-207ENST00000420296 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
NDUFA3-207ENST00000420296 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
NDUFA3-207ENST00000420296 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 SRPK2P78362 688 aaKnown RBP13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
NDUFA3-207ENST00000420296 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
NDUFA3-207ENST00000420296 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
NDUFA3-207ENST00000420296 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
NDUFA3-207ENST00000420296 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
NDUFA3-207ENST00000420296 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
NDUFA3-207ENST00000420296 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
NDUFA3-207ENST00000420296 COL18A1P39060 1754 aa13.11□□□□□ -0.31
NDUFA3-207ENST00000420296 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 USP19O94966 1318 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
NDUFA3-207ENST00000420296 USP6P35125 1406 aa13.09□□□□□ -0.31
NDUFA3-207ENST00000420296 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
NDUFA3-207ENST00000420296 PARP4Q9UKK3 1724 aaKnown RBP13.09□□□□□ -0.31
NDUFA3-207ENST00000420296 SLIT3O75094 1523 aa13.08□□□□□ -0.31
NDUFA3-207ENST00000420296 ROCK2O75116 1388 aaKnown RBP13.08□□□□□ -0.31
NDUFA3-207ENST00000420296 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
NDUFA3-207ENST00000420296 LRRC37A3O60309 1634 aa13.07□□□□□ -0.32
NDUFA3-207ENST00000420296 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
NDUFA3-207ENST00000420296 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
NDUFA3-207ENST00000420296 LARP1Q6PKG0 1096 aaKnown RBP13.07□□□□□ -0.32
NDUFA3-207ENST00000420296 RREB1Q92766 1687 aa13.07□□□□□ -0.32
NDUFA3-207ENST00000420296 COL5A2P05997 1499 aaPredicted RBP13.06□□□□□ -0.32
NDUFA3-207ENST00000420296 NUP188Q5SRE5 1749 aa13.06□□□□□ -0.32
NDUFA3-207ENST00000420296 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
NDUFA3-207ENST00000420296 CPDO75976 1380 aa13.06□□□□□ -0.32
NDUFA3-207ENST00000420296 LTN1O94822 1766 aa13.05□□□□□ -0.32
NDUFA3-207ENST00000420296 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
NDUFA3-207ENST00000420296 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
NDUFA3-207ENST00000420296 LRP5O75197 1615 aa13.05□□□□□ -0.32
NDUFA3-207ENST00000420296 PEAK1Q9H792 1746 aa13.05□□□□□ -0.32
NDUFA3-207ENST00000420296 GCP02774 474 aa13.04□□□□□ -0.32
NDUFA3-207ENST00000420296 EVA1CP58658 441 aa13.03□□□□□ -0.32
NDUFA3-207ENST00000420296 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
NDUFA3-207ENST00000420296 EVC2Q86UK5 1308 aa13.03□□□□□ -0.32
NDUFA3-207ENST00000420296 NFAT5O94916 1531 aa13.03□□□□□ -0.32
NDUFA3-207ENST00000420296 SOX12O15370 315 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 TRIM37O94972 964 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 BAG6P46379 1132 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 NLRP6P59044 892 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 NLRP13Q86W25 1043 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
NDUFA3-207ENST00000420296 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
NDUFA3-207ENST00000420296 DISP2A7MBM2 1401 aa13□□□□□ -0.33
NDUFA3-207ENST00000420296 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
NDUFA3-207ENST00000420296 TTC21BQ7Z4L5 1316 aa13□□□□□ -0.33
NDUFA3-207ENST00000420296 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
NDUFA3-207ENST00000420296 CRB1P82279 1406 aa12.99□□□□□ -0.33
NDUFA3-207ENST00000420296 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
NDUFA3-207ENST00000420296 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
NDUFA3-207ENST00000420296 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
NDUFA3-207ENST00000420296 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
NDUFA3-207ENST00000420296 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
NDUFA3-207ENST00000420296 AATKQ6ZMQ8 1374 aa12.98□□□□□ -0.33
NDUFA3-207ENST00000420296 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms