RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 FOXK1P85037 733 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 MICALL2Q8IY33 904 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 MYH16Q9H6N6 1097 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 MAPK8IP3Q9UPT6 1336 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 RTEL1-TNFRSF6BF6WH68 1400 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 PIK3C2GO75747 1445 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 MYO5CQ9NQX4 1742 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 CCDC141Q6ZP82 1450 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 C9orf84Q5VXU9 1444 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 PDS5BQ9NTI5 1447 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 DISP3Q9P2K9 1392 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 NPC1L1Q9UHC9 1359 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 TIE1P35590 1138 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 C1orf115Q9H7X2 142 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 ADAMTS8Q9UP79 889 aa7.74□□□□□ -1.17
CHD2-202ENST00000420239 UNC13BO14795 1591 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 A2MP01023 1474 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 NKTRP30414 1462 aaKnown RBP7.73□□□□□ -1.17
CHD2-202ENST00000420239 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 CC2D1BQ5T0F9 858 aaKnown RBP7.73□□□□□ -1.17
CHD2-202ENST00000420239 GAS2L3Q86XJ1 694 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 WDR7Q9Y4E6 1490 aa7.73□□□□□ -1.17
CHD2-202ENST00000420239 MAP2K5Q13163 448 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 PARP9Q8IXQ6 854 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 PANK3Q9H999 370 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 BMP2KQ9NSY1 1161 aaPredicted RBP7.72□□□□□ -1.17
CHD2-202ENST00000420239 SYNMO15061 1565 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 ATP10AO60312 1499 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 MINK1Q8N4C8 1332 aaPredicted RBP7.72□□□□□ -1.17
CHD2-202ENST00000420239 NUTM2FA1L443 756 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 TMC2Q8TDI7 906 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 ISY1Q9ULR0 285 aaKnown RBP7.72□□□□□ -1.17
CHD2-202ENST00000420239 TRIM35Q9UPQ4 493 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 IQGAP1P46940 1657 aa7.72□□□□□ -1.17
CHD2-202ENST00000420239 PPP2R1AP30153 589 aa7.71□□□□□ -1.17
CHD2-202ENST00000420239 PLPP6Q8IY26 295 aa7.71□□□□□ -1.17
CHD2-202ENST00000420239 CHMP5Q9NZZ3 219 aa7.71□□□□□ -1.17
CHD2-202ENST00000420239 PLA2R1Q13018 1463 aa7.71□□□□□ -1.17
CHD2-202ENST00000420239 MAGI2Q86UL8 1455 aa7.71□□□□□ -1.17
CHD2-202ENST00000420239 BCAR3O75815 825 aa7.71□□□□□ -1.18
CHD2-202ENST00000420239 TMF1P82094 1093 aa7.71□□□□□ -1.18
CHD2-202ENST00000420239 FGD1P98174 961 aa7.71□□□□□ -1.18
CHD2-202ENST00000420239 AMHR2Q16671 573 aa7.71□□□□□ -1.18
CHD2-202ENST00000420239 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.18
CHD2-202ENST00000420239 IRF6O14896 467 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 OFD1O75665 1012 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 PDCD7Q8N8D1 485 aaKnown RBP7.7□□□□□ -1.18
CHD2-202ENST00000420239 TRIM44Q96DX7 344 aaPredicted RBP7.7□□□□□ -1.18
CHD2-202ENST00000420239 ASXL1Q8IXJ9 1541 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 IQGAP3Q86VI3 1631 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 FECHP22830 423 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 ARID3AQ99856 593 aa7.7□□□□□ -1.18
CHD2-202ENST00000420239 SCAPERQ9BY12 1400 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 NCOA3Q9Y6Q9 1424 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 C2orf72A6NCS6 295 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 DDX11L8A8MPP1 907 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 E9PSI1 815 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 ABCA8O94911 1581 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 MYOM1P52179 1685 aa7.69□□□□□ -1.18
CHD2-202ENST00000420239 GNPATO15228 680 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 OSBPP22059 807 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 DDIT3P35638 169 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 WDR43Q15061 677 aaKnown RBP eCLIP7.68□□□□□ -1.181e-6■■□□□ 11.8
CHD2-202ENST00000420239 SMAP1Q8IYB5 467 aaPredicted RBP7.68□□□□□ -1.18
CHD2-202ENST00000420239 KIF3CO14782 793 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 PPP1R9BQ96SB3 815 aa7.68□□□□□ -1.18
CHD2-202ENST00000420239 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 TERF1P54274 439 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.67□□□□□ -1.18
CHD2-202ENST00000420239 ZSCAN30Q86W11 494 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 UPF2Q9HAU5 1272 aaKnown RBP7.67□□□□□ -1.18
CHD2-202ENST00000420239 PMFBP1Q8TBY8 1022 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 PANK1Q8TE04 598 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 FAM13BQ9NYF5 915 aa7.67□□□□□ -1.18
CHD2-202ENST00000420239 GRIN2AQ12879 1464 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 PLB1Q6P1J6 1458 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 MAP3K9P80192 1104 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 CCDC173Q0VFZ6 552 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
CHD2-202ENST00000420239 MAP7D2Q96T17 732 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 PDZRN3Q9UPQ7 1066 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 COG6Q9Y2V7 657 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 SHROOM2Q13796 1616 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 MAGI1Q96QZ7 1491 aaPredicted RBP7.66□□□□□ -1.18
CHD2-202ENST00000420239 MADDQ8WXG6 1647 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 TSPY4P0CV99 314 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 TSPY10P0CW01 314 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 HIC1Q14526 733 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 PRDM10Q9NQV6 1147 aa7.66□□□□□ -1.18
CHD2-202ENST00000420239 ZHX1Q9UKY1 873 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms