RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ZNF692Q9BU19 519 aaPredicted RBP28.79■■■□□ 2.2
HMGXB4-203ENST00000420166 MYOM1P52179 1685 aa28.78■■■□□ 2.2
HMGXB4-203ENST00000420166 NUTM2BA6NNL0 878 aaPredicted RBP28.78■■■□□ 2.2
HMGXB4-203ENST00000420166 NUTM2EB1AL46 878 aaPredicted RBP28.78■■■□□ 2.2
HMGXB4-203ENST00000420166 NUTM2AQ8IVF1 878 aaPredicted RBP28.78■■■□□ 2.2
HMGXB4-203ENST00000420166 NRKQ7Z2Y5 1582 aa28.78■■■□□ 2.2
HMGXB4-203ENST00000420166 ABCA3Q99758 1704 aa28.77■■■□□ 2.2
HMGXB4-203ENST00000420166 SSH2Q76I76 1423 aa28.77■■■□□ 2.2
HMGXB4-203ENST00000420166 KTN1Q86UP2 1357 aaKnown RBP28.76■■■□□ 2.2
HMGXB4-203ENST00000420166 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
HMGXB4-203ENST00000420166 TERF2IPQ9NYB0 399 aa28.75■■■□□ 2.19
HMGXB4-203ENST00000420166 A0A1W2PP64 1363 aa28.74■■■□□ 2.19
HMGXB4-203ENST00000420166 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
HMGXB4-203ENST00000420166 CRYBG1Q9Y4K1 1723 aa28.73■■■□□ 2.19
HMGXB4-203ENST00000420166 ANKRD36BQ8N2N9 1353 aa28.71■■■□□ 2.19
HMGXB4-203ENST00000420166 MARF1Q9Y4F3 1742 aaKnown RBP28.71■■■□□ 2.19
HMGXB4-203ENST00000420166 PIK3C2AO00443 1686 aa28.7■■■□□ 2.19
HMGXB4-203ENST00000420166 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.18
HMGXB4-203ENST00000420166 TTC21BQ7Z4L5 1316 aa28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 C11orf95C9JLR9 678 aaPredicted RBP28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 ABTB2Q8N961 1025 aa28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 CABLES1Q8TDN4 633 aa28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 EDC4Q6P2E9 1401 aaKnown RBP28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 TTC21AQ8NDW8 1320 aa28.69■■■□□ 2.18
HMGXB4-203ENST00000420166 PLEKHG5O94827 1062 aa28.68■■■□□ 2.18
HMGXB4-203ENST00000420166 POLR3GLQ9BT43 218 aa28.68■■■□□ 2.18
HMGXB4-203ENST00000420166 NUTM2GQ5VZR2 741 aa28.67■■■□□ 2.18
HMGXB4-203ENST00000420166 PHRF1Q9P1Y6 1649 aaKnown RBP28.66■■■□□ 2.18
HMGXB4-203ENST00000420166 ADAMTS2O95450 1211 aa28.66■■■□□ 2.18
HMGXB4-203ENST00000420166 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
HMGXB4-203ENST00000420166 PHF23Q9BUL5 403 aaPredicted RBP28.64■■■□□ 2.18
HMGXB4-203ENST00000420166 NLRP13Q86W25 1043 aa28.63■■■□□ 2.17
HMGXB4-203ENST00000420166 USP19O94966 1318 aa28.63■■■□□ 2.17
HMGXB4-203ENST00000420166 KIF7Q2M1P5 1343 aa28.63■■■□□ 2.17
HMGXB4-203ENST00000420166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.62■■■□□ 2.17
HMGXB4-203ENST00000420166 NLRP6P59044 892 aa28.61■■■□□ 2.17
HMGXB4-203ENST00000420166 USP54Q70EL1 1684 aa28.61■■■□□ 2.17
HMGXB4-203ENST00000420166 C8orf37Q96NL8 207 aa28.6■■■□□ 2.17
HMGXB4-203ENST00000420166 SLIT3O75094 1523 aa28.58■■■□□ 2.17
HMGXB4-203ENST00000420166 NME9Q86XW9 330 aa28.57■■■□□ 2.16
HMGXB4-203ENST00000420166 USP31Q70CQ4 1352 aa28.57■■■□□ 2.16
HMGXB4-203ENST00000420166 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
HMGXB4-203ENST00000420166 CCDC7Q96M83 1385 aa28.55■■■□□ 2.16
HMGXB4-203ENST00000420166 AFF2P51816 1311 aa28.55■■■□□ 2.16
HMGXB4-203ENST00000420166 RGS17Q9UGC6 210 aaPredicted RBP28.55■■■□□ 2.16
HMGXB4-203ENST00000420166 CARD14Q9BXL6 1004 aa28.54■■■□□ 2.16
HMGXB4-203ENST00000420166 ZRANB1Q9UGI0 708 aa28.54■■■□□ 2.16
HMGXB4-203ENST00000420166 NSD3Q9BZ95 1437 aa28.53■■■□□ 2.16
HMGXB4-203ENST00000420166 KIF20BQ96Q89 1820 aa28.53■■■□□ 2.16
HMGXB4-203ENST00000420166 PLCH1Q4KWH8 1693 aa28.52■■■□□ 2.16
HMGXB4-203ENST00000420166 WASHC2AQ641Q2 1341 aa28.52■■■□□ 2.16
HMGXB4-203ENST00000420166 GCP02774 474 aa28.52■■■□□ 2.16
HMGXB4-203ENST00000420166 COL14A1Q05707 1796 aaKnown RBP28.52■■■□□ 2.16
HMGXB4-203ENST00000420166 OVOS2A0A0J9YW53 1432 aa28.51■■■□□ 2.15
HMGXB4-203ENST00000420166 OVOS2Q6IE36 1432 aa28.51■■■□□ 2.15
HMGXB4-203ENST00000420166 FNBP4Q8N3X1 1017 aaPredicted RBP28.5■■■□□ 2.15
HMGXB4-203ENST00000420166 KIAA0232Q92628 1395 aa28.5■■■□□ 2.15
HMGXB4-203ENST00000420166 NWD2Q9ULI1 1742 aa28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 SLIT2O94813 1529 aa28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 FAM83GA6ND36 823 aa28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 ZNF772Q68DY9 489 aaPredicted RBP28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 PANK3Q9H999 370 aa28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 CPDO75976 1380 aa28.49■■■□□ 2.15
HMGXB4-203ENST00000420166 ZC3H6P61129 1189 aaKnown RBP28.48■■■□□ 2.15
HMGXB4-203ENST00000420166 PRDM11Q9NQV5 511 aa28.48■■■□□ 2.15
HMGXB4-203ENST00000420166 NFAT5O94916 1531 aa28.48■■■□□ 2.15
HMGXB4-203ENST00000420166 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.47■■■□□ 2.15
HMGXB4-203ENST00000420166 FYB1O15117 783 aa28.46■■■□□ 2.15
HMGXB4-203ENST00000420166 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
HMGXB4-203ENST00000420166 BCL9LQ86UU0 1499 aa28.46■■■□□ 2.15
HMGXB4-203ENST00000420166 USP21Q9UK80 565 aa28.45■■■□□ 2.14
HMGXB4-203ENST00000420166 COG3Q96JB2 828 aa28.44■■■□□ 2.14
HMGXB4-203ENST00000420166 CHRNA2Q15822 529 aa28.43■■■□□ 2.14
HMGXB4-203ENST00000420166 POTEAQ6S8J7 498 aa28.43■■■□□ 2.14
HMGXB4-203ENST00000420166 GGNBP2Q9H3C7 697 aa28.43■■■□□ 2.14
HMGXB4-203ENST00000420166 NRAPQ86VF7 1730 aa28.43■■■□□ 2.14
HMGXB4-203ENST00000420166 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
HMGXB4-203ENST00000420166 SOX12O15370 315 aa28.42■■■□□ 2.14
HMGXB4-203ENST00000420166 LMO7Q8WWI1 1683 aa28.42■■■□□ 2.14
HMGXB4-203ENST00000420166 ATRNO75882 1429 aa28.39■■■□□ 2.14
HMGXB4-203ENST00000420166 UNC5CLQ8IV45 518 aa28.39■■■□□ 2.14
HMGXB4-203ENST00000420166 ANKRD26Q9UPS8 1709 aa28.39■■■□□ 2.14
HMGXB4-203ENST00000420166 LTN1O94822 1766 aa28.39■■■□□ 2.13
HMGXB4-203ENST00000420166 COL18A1P39060 1754 aa28.39■■■□□ 2.13
HMGXB4-203ENST00000420166 ARHGEF25Q86VW2 580 aa28.38■■■□□ 2.13
HMGXB4-203ENST00000420166 BTG4Q9NY30 223 aa28.38■■■□□ 2.13
HMGXB4-203ENST00000420166 QTRT2Q9H974 415 aaKnown RBP28.37■■■□□ 2.13
HMGXB4-203ENST00000420166 TRPC5Q9UL62 973 aaPredicted RBP28.37■■■□□ 2.13
HMGXB4-203ENST00000420166 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
HMGXB4-203ENST00000420166 CAMTA1Q9Y6Y1 1673 aa28.36■■■□□ 2.13
HMGXB4-203ENST00000420166 ZBTB7CA1YPR0 619 aa28.36■■■□□ 2.13
HMGXB4-203ENST00000420166 ABCC6O95255 1503 aa28.34■■■□□ 2.13
HMGXB4-203ENST00000420166 KNSTRNQ9Y448 316 aa28.34■■■□□ 2.13
HMGXB4-203ENST00000420166 NSD2O96028 1365 aa28.33■■■□□ 2.13
HMGXB4-203ENST00000420166 RGPD5Q99666 1765 aa28.32■■■□□ 2.12
HMGXB4-203ENST00000420166 PER1O15534 1290 aaPredicted RBP28.3■■■□□ 2.12
HMGXB4-203ENST00000420166 VPS72Q15906 364 aa28.3■■■□□ 2.12
HMGXB4-203ENST00000420166 RXRBP28702 533 aa28.29■■■□□ 2.12
HMGXB4-203ENST00000420166 COL5A2P05997 1499 aaPredicted RBP28.28■■■□□ 2.12
HMGXB4-203ENST00000420166 RBM6P78332 1123 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms