RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 ZNF772Q68DY9 489 aaPredicted RBP13.91□□□□□ -0.18
PHF3-203ENST00000420043 CDK19Q9BWU1 502 aa13.91□□□□□ -0.18
PHF3-203ENST00000420043 TECPR2O15040 1411 aa13.9□□□□□ -0.18
PHF3-203ENST00000420043 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
PHF3-203ENST00000420043 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
PHF3-203ENST00000420043 KNDC1Q76NI1 1749 aa13.9□□□□□ -0.18
PHF3-203ENST00000420043 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.19
PHF3-203ENST00000420043 SHPRHQ149N8 1683 aa13.89□□□□□ -0.19
PHF3-203ENST00000420043 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
PHF3-203ENST00000420043 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
PHF3-203ENST00000420043 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
PHF3-203ENST00000420043 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
PHF3-203ENST00000420043 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
PHF3-203ENST00000420043 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
PHF3-203ENST00000420043 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
PHF3-203ENST00000420043 PTCH1Q13635 1447 aa13.88□□□□□ -0.19
PHF3-203ENST00000420043 AFF2P51816 1311 aa13.88□□□□□ -0.19
PHF3-203ENST00000420043 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
PHF3-203ENST00000420043 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
PHF3-203ENST00000420043 RXRBP28702 533 aa13.87□□□□□ -0.19
PHF3-203ENST00000420043 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
PHF3-203ENST00000420043 PNPLA6Q8IY17 1366 aa13.86□□□□□ -0.19
PHF3-203ENST00000420043 WASLO00401 505 aaPredicted RBP13.86□□□□□ -0.19
PHF3-203ENST00000420043 PPP2R1AP30153 589 aa13.86□□□□□ -0.19
PHF3-203ENST00000420043 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
PHF3-203ENST00000420043 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
PHF3-203ENST00000420043 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
PHF3-203ENST00000420043 XPCQ01831 940 aaPredicted RBP13.84□□□□□ -0.19
PHF3-203ENST00000420043 NGLY1Q96IV0 654 aa13.84□□□□□ -0.19
PHF3-203ENST00000420043 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
PHF3-203ENST00000420043 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
PHF3-203ENST00000420043 NSD2O96028 1365 aa13.83□□□□□ -0.19
PHF3-203ENST00000420043 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
PHF3-203ENST00000420043 A0A1W2PP64 1363 aa13.83□□□□□ -0.2
PHF3-203ENST00000420043 FOXO3O43524 673 aa13.82□□□□□ -0.2
PHF3-203ENST00000420043 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
PHF3-203ENST00000420043 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
PHF3-203ENST00000420043 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHF3-203ENST00000420043 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
PHF3-203ENST00000420043 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
PHF3-203ENST00000420043 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
PHF3-203ENST00000420043 ATP7BP35670 1465 aa13.8□□□□□ -0.2
PHF3-203ENST00000420043 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
PHF3-203ENST00000420043 PPIP5K1Q6PFW1 1433 aa13.79□□□□□ -0.2
PHF3-203ENST00000420043 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
PHF3-203ENST00000420043 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
PHF3-203ENST00000420043 USP21Q9UK80 565 aa13.78□□□□□ -0.2
PHF3-203ENST00000420043 NPHP3Q7Z494 1330 aa13.78□□□□□ -0.2
PHF3-203ENST00000420043 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
PHF3-203ENST00000420043 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
PHF3-203ENST00000420043 INSRP06213 1382 aa13.76□□□□□ -0.21
PHF3-203ENST00000420043 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
PHF3-203ENST00000420043 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
PHF3-203ENST00000420043 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
PHF3-203ENST00000420043 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
PHF3-203ENST00000420043 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
PHF3-203ENST00000420043 RGS12O14924 1447 aa13.74□□□□□ -0.21
PHF3-203ENST00000420043 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
PHF3-203ENST00000420043 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
PHF3-203ENST00000420043 PXDNQ92626 1479 aa13.74□□□□□ -0.21
PHF3-203ENST00000420043 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
PHF3-203ENST00000420043 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
PHF3-203ENST00000420043 FYB1O15117 783 aa13.73□□□□□ -0.21
PHF3-203ENST00000420043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHF3-203ENST00000420043 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
PHF3-203ENST00000420043 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
PHF3-203ENST00000420043 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
PHF3-203ENST00000420043 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
PHF3-203ENST00000420043 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
PHF3-203ENST00000420043 CPSF1Q10570 1443 aaKnown RBP13.72□□□□□ -0.21
PHF3-203ENST00000420043 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
PHF3-203ENST00000420043 NEFLP07196 543 aa13.71□□□□□ -0.21
PHF3-203ENST00000420043 MTHFSP49914 203 aa13.71□□□□□ -0.21
PHF3-203ENST00000420043 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
PHF3-203ENST00000420043 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
PHF3-203ENST00000420043 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
PHF3-203ENST00000420043 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
PHF3-203ENST00000420043 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
PHF3-203ENST00000420043 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
PHF3-203ENST00000420043 ANKARQ7Z5J8 1434 aa13.69□□□□□ -0.22
PHF3-203ENST00000420043 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
PHF3-203ENST00000420043 ACEP12821 1306 aa13.68□□□□□ -0.22
PHF3-203ENST00000420043 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
PHF3-203ENST00000420043 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
PHF3-203ENST00000420043 NGDNQ8NEJ9 315 aaKnown RBP13.68□□□□□ -0.22
PHF3-203ENST00000420043 COG3Q96JB2 828 aa13.68□□□□□ -0.22
PHF3-203ENST00000420043 SALL2Q9Y467 1007 aaPredicted RBP13.68□□□□□ -0.22
PHF3-203ENST00000420043 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
PHF3-203ENST00000420043 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 ATRNO75882 1429 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 KCNA4P22459 653 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 PSME1Q06323 249 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 NME9Q86XW9 330 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
PHF3-203ENST00000420043 TOPAZ1Q8N9V7 1692 aa13.66□□□□□ -0.22
PHF3-203ENST00000420043 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
PHF3-203ENST00000420043 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
PHF3-203ENST00000420043 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms