RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 CCDC125Q86Z20 511 aa29.45■■■□□ 2.31
MCF2L-212ENST00000420013 CDK19Q9BWU1 502 aa29.43■■■□□ 2.3
MCF2L-212ENST00000420013 PLEKHG5O94827 1062 aa29.42■■■□□ 2.3
MCF2L-212ENST00000420013 NBPF1Q3BBV0 1214 aa29.42■■■□□ 2.3
MCF2L-212ENST00000420013 CENPJQ9HC77 1338 aaPredicted RBP29.42■■■□□ 2.3
MCF2L-212ENST00000420013 CCDC61Q9Y6R9 512 aa29.41■■■□□ 2.3
MCF2L-212ENST00000420013 FAM83GA6ND36 823 aa29.4■■■□□ 2.3
MCF2L-212ENST00000420013 PAK3O75914 559 aaPredicted RBP29.4■■■□□ 2.3
MCF2L-212ENST00000420013 NRKQ7Z2Y5 1582 aa29.39■■■□□ 2.3
MCF2L-212ENST00000420013 BLMP54132 1417 aaPredicted RBP29.39■■■□□ 2.3
MCF2L-212ENST00000420013 CCDC9Q9Y3X0 531 aaKnown RBP29.38■■■□□ 2.29
MCF2L-212ENST00000420013 PLEKHG3A1L390 1219 aa29.37■■■□□ 2.29
MCF2L-212ENST00000420013 ONECUT3O60422 494 aaPredicted RBP29.37■■■□□ 2.29
MCF2L-212ENST00000420013 SEPT12Q8IYM1 358 aa29.36■■■□□ 2.29
MCF2L-212ENST00000420013 ACEP12821 1306 aa29.36■■■□□ 2.29
MCF2L-212ENST00000420013 BRD4O60885 1362 aaPredicted RBP29.36■■■□□ 2.29
MCF2L-212ENST00000420013 THSD7AQ9UPZ6 1657 aa29.35■■■□□ 2.29
MCF2L-212ENST00000420013 L3MBTL2Q969R5 705 aa29.35■■■□□ 2.29
MCF2L-212ENST00000420013 BTG4Q9NY30 223 aa29.35■■■□□ 2.29
MCF2L-212ENST00000420013 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
MCF2L-212ENST00000420013 PRDM11Q9NQV5 511 aa29.33■■■□□ 2.29
MCF2L-212ENST00000420013 NBPF8Q3BBV2 869 aa29.31■■■□□ 2.28
MCF2L-212ENST00000420013 KIAA0232Q92628 1395 aa29.3■■■□□ 2.28
MCF2L-212ENST00000420013 SRPK2P78362 688 aaKnown RBP29.3■■■□□ 2.28
MCF2L-212ENST00000420013 LMO7Q8WWI1 1683 aa29.28■■■□□ 2.28
MCF2L-212ENST00000420013 KRT27Q7Z3Y8 459 aa29.28■■■□□ 2.28
MCF2L-212ENST00000420013 ROCK2O75116 1388 aaKnown RBP29.27■■■□□ 2.28
MCF2L-212ENST00000420013 USP19O94966 1318 aa29.27■■■□□ 2.28
MCF2L-212ENST00000420013 SPATA31A5Q5VU36 1347 aa29.27■■■□□ 2.28
MCF2L-212ENST00000420013 SPATA31A7Q8IWB4 1347 aa29.27■■■□□ 2.28
MCF2L-212ENST00000420013 RGPD1P0DJD0 1748 aa29.27■■■□□ 2.28
MCF2L-212ENST00000420013 CPDO75976 1380 aa29.26■■■□□ 2.27
MCF2L-212ENST00000420013 SIN3AQ96ST3 1273 aa29.25■■■□□ 2.27
MCF2L-212ENST00000420013 USP6P35125 1406 aa29.25■■■□□ 2.27
MCF2L-212ENST00000420013 A0A0G2JS52 829 aa29.24■■■□□ 2.27
MCF2L-212ENST00000420013 MYT1Q01538 1121 aa29.24■■■□□ 2.27
MCF2L-212ENST00000420013 FAM98CQ17RN3 349 aaKnown RBP29.24■■■□□ 2.27
MCF2L-212ENST00000420013 AKAP12Q02952 1782 aa29.24■■■□□ 2.27
MCF2L-212ENST00000420013 EVC2Q86UK5 1308 aa29.22■■■□□ 2.27
MCF2L-212ENST00000420013 SF3B2Q13435 895 aaKnown RBP29.22■■■□□ 2.27
MCF2L-212ENST00000420013 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
MCF2L-212ENST00000420013 ZRANB1Q9UGI0 708 aa29.22■■■□□ 2.27
MCF2L-212ENST00000420013 ABTB2Q8N961 1025 aa29.21■■■□□ 2.27
MCF2L-212ENST00000420013 SLIT3O75094 1523 aa29.2■■■□□ 2.27
MCF2L-212ENST00000420013 PIK3C2AO00443 1686 aa29.2■■■□□ 2.26
MCF2L-212ENST00000420013 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
MCF2L-212ENST00000420013 SBNO2Q9Y2G9 1366 aa29.18■■■□□ 2.26
MCF2L-212ENST00000420013 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
MCF2L-212ENST00000420013 NUTM2GQ5VZR2 741 aa29.18■■■□□ 2.26
MCF2L-212ENST00000420013 NLRP13Q86W25 1043 aa29.18■■■□□ 2.26
MCF2L-212ENST00000420013 SPATA31A1Q5TZJ5 1347 aa29.18■■■□□ 2.26
MCF2L-212ENST00000420013 TNS1Q9HBL0 1735 aaKnown RBP29.17■■■□□ 2.26
MCF2L-212ENST00000420013 ZC3H6P61129 1189 aaKnown RBP29.17■■■□□ 2.26
MCF2L-212ENST00000420013 CHRNA2Q15822 529 aa29.17■■■□□ 2.26
MCF2L-212ENST00000420013 CAMTA1Q9Y6Y1 1673 aa29.17■■■□□ 2.26
MCF2L-212ENST00000420013 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.25
MCF2L-212ENST00000420013 CABP1Q9NZU7 370 aa29.13■■■□□ 2.25
MCF2L-212ENST00000420013 STRN4Q9NRL3 753 aa29.12■■■□□ 2.25
MCF2L-212ENST00000420013 COL5A2P05997 1499 aaPredicted RBP29.11■■■□□ 2.25
MCF2L-212ENST00000420013 PARP4Q9UKK3 1724 aaKnown RBP29.11■■■□□ 2.25
MCF2L-212ENST00000420013 DISP2A7MBM2 1401 aa29.11■■■□□ 2.25
MCF2L-212ENST00000420013 GCP02774 474 aa29.1■■■□□ 2.25
MCF2L-212ENST00000420013 BAG6P46379 1132 aa29.1■■■□□ 2.25
MCF2L-212ENST00000420013 DEFB132Q7Z7B7 95 aa29.09■■■□□ 2.25
MCF2L-212ENST00000420013 SRCAPQ6ZRS2 3230 aa29.09■■■□□ 2.25
MCF2L-212ENST00000420013 BARGINQ6ZT62 677 aa29.08■■■□□ 2.25
MCF2L-212ENST00000420013 TONSLQ96HA7 1378 aa29.08■■■□□ 2.25
MCF2L-212ENST00000420013 USP54Q70EL1 1684 aa29.08■■■□□ 2.25
MCF2L-212ENST00000420013 WNK3Q9BYP7 1800 aa29.06■■■□□ 2.24
MCF2L-212ENST00000420013 COL18A1P39060 1754 aa29.06■■■□□ 2.24
MCF2L-212ENST00000420013 EVA1CP58658 441 aa29.06■■■□□ 2.24
MCF2L-212ENST00000420013 ZNF692Q9BU19 519 aaPredicted RBP29.06■■■□□ 2.24
MCF2L-212ENST00000420013 CPSF1Q10570 1443 aaKnown RBP29.05■■■□□ 2.24
MCF2L-212ENST00000420013 ABCC6O95255 1503 aa29.04■■■□□ 2.24
MCF2L-212ENST00000420013 AATKQ6ZMQ8 1374 aa29.04■■■□□ 2.24
MCF2L-212ENST00000420013 TTC21AQ8NDW8 1320 aa29.04■■■□□ 2.24
MCF2L-212ENST00000420013 NLRP6P59044 892 aa29.04■■■□□ 2.24
MCF2L-212ENST00000420013 THRAP3Q9Y2W1 955 aaKnown RBP29.04■■■□□ 2.24
MCF2L-212ENST00000420013 LRP5O75197 1615 aa29.03■■■□□ 2.24
MCF2L-212ENST00000420013 CRB1P82279 1406 aa29.03■■■□□ 2.24
MCF2L-212ENST00000420013 TCP11L2Q8N4U5 519 aa29.01■■■□□ 2.23
MCF2L-212ENST00000420013 CARD11Q9BXL7 1154 aa29.01■■■□□ 2.23
MCF2L-212ENST00000420013 LARP1Q6PKG0 1096 aaKnown RBP29■■■□□ 2.23
MCF2L-212ENST00000420013 TTC21BQ7Z4L5 1316 aa28.99■■■□□ 2.23
MCF2L-212ENST00000420013 NFAT5O94916 1531 aa28.99■■■□□ 2.23
MCF2L-212ENST00000420013 LRRC37A3O60309 1634 aa28.98■■■□□ 2.23
MCF2L-212ENST00000420013 FAM196AQ6ZSG2 479 aa28.98■■■□□ 2.23
MCF2L-212ENST00000420013 USP35Q9P2H5 1018 aa28.98■■■□□ 2.23
MCF2L-212ENST00000420013 KTN1Q86UP2 1357 aaKnown RBP28.98■■■□□ 2.23
MCF2L-212ENST00000420013 FAM182BQ5T319 152 aa28.96■■■□□ 2.23
MCF2L-212ENST00000420013 KCNH5Q8NCM2 988 aa28.96■■■□□ 2.23
MCF2L-212ENST00000420013 PARD3Q8TEW0 1356 aa28.96■■■□□ 2.23
MCF2L-212ENST00000420013 RREB1Q92766 1687 aa28.96■■■□□ 2.23
MCF2L-212ENST00000420013 RGPD5Q99666 1765 aa28.95■■■□□ 2.22
MCF2L-212ENST00000420013 PDE3BQ13370 1112 aa28.93■■■□□ 2.22
MCF2L-212ENST00000420013 PEAK1Q9H792 1746 aa28.93■■■□□ 2.22
MCF2L-212ENST00000420013 CD163L1Q9NR16 1453 aa28.92■■■□□ 2.22
MCF2L-212ENST00000420013 C11orf95C9JLR9 678 aaPredicted RBP28.92■■■□□ 2.22
MCF2L-212ENST00000420013 RGPD3A6NKT7 1758 aaPredicted RBP28.91■■■□□ 2.22
MCF2L-212ENST00000420013 RGPD4Q7Z3J3 1758 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms