RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
CTSA-205ENST00000419493 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
CTSA-205ENST00000419493 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
CTSA-205ENST00000419493 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
CTSA-205ENST00000419493 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
CTSA-205ENST00000419493 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
CTSA-205ENST00000419493 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
CTSA-205ENST00000419493 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
CTSA-205ENST00000419493 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
CTSA-205ENST00000419493 NLRP13Q86W25 1043 aa13.64□□□□□ -0.23
CTSA-205ENST00000419493 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
CTSA-205ENST00000419493 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
CTSA-205ENST00000419493 ATRNO75882 1429 aa13.64□□□□□ -0.23
CTSA-205ENST00000419493 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
CTSA-205ENST00000419493 SLIT2O94813 1529 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 RGS12O14924 1447 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
CTSA-205ENST00000419493 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
CTSA-205ENST00000419493 A0A0G2JS52 829 aa13.62□□□□□ -0.23
CTSA-205ENST00000419493 NLRP6P59044 892 aa13.62□□□□□ -0.23
CTSA-205ENST00000419493 MYT1Q01538 1121 aa13.62□□□□□ -0.23
CTSA-205ENST00000419493 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
CTSA-205ENST00000419493 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
CTSA-205ENST00000419493 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
CTSA-205ENST00000419493 CHRNA2Q15822 529 aa13.61□□□□□ -0.23
CTSA-205ENST00000419493 VPS72Q15906 364 aa13.61□□□□□ -0.23
CTSA-205ENST00000419493 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTSA-205ENST00000419493 ABCA3Q99758 1704 aa13.6□□□□□ -0.23
CTSA-205ENST00000419493 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
CTSA-205ENST00000419493 USP6P35125 1406 aa13.59□□□□□ -0.23
CTSA-205ENST00000419493 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
CTSA-205ENST00000419493 EVA1CP58658 441 aa13.59□□□□□ -0.23
CTSA-205ENST00000419493 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
CTSA-205ENST00000419493 BRD4O60885 1362 aaPredicted RBP13.58□□□□□ -0.23
CTSA-205ENST00000419493 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
CTSA-205ENST00000419493 GCP02774 474 aa13.58□□□□□ -0.24
CTSA-205ENST00000419493 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
CTSA-205ENST00000419493 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
CTSA-205ENST00000419493 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
CTSA-205ENST00000419493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTSA-205ENST00000419493 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
CTSA-205ENST00000419493 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
CTSA-205ENST00000419493 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
CTSA-205ENST00000419493 SOX12O15370 315 aa13.56□□□□□ -0.24
CTSA-205ENST00000419493 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
CTSA-205ENST00000419493 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
CTSA-205ENST00000419493 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
CTSA-205ENST00000419493 TMF1P82094 1093 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
CTSA-205ENST00000419493 TESK2Q96S53 571 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 TERF2IPQ9NYB0 399 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 USP19O94966 1318 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 USP47Q96K76 1375 aa13.55□□□□□ -0.24
CTSA-205ENST00000419493 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
CTSA-205ENST00000419493 GLI3P10071 1580 aa13.54□□□□□ -0.24
CTSA-205ENST00000419493 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
CTSA-205ENST00000419493 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
CTSA-205ENST00000419493 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
CTSA-205ENST00000419493 CPSF1Q10570 1443 aaKnown RBP13.53□□□□□ -0.24
CTSA-205ENST00000419493 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
CTSA-205ENST00000419493 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
CTSA-205ENST00000419493 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
CTSA-205ENST00000419493 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
CTSA-205ENST00000419493 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
CTSA-205ENST00000419493 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
CTSA-205ENST00000419493 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 NRKQ7Z2Y5 1582 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 CPDO75976 1380 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
CTSA-205ENST00000419493 NME9Q86XW9 330 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 NRAPQ86VF7 1730 aa13.5□□□□□ -0.25
CTSA-205ENST00000419493 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
CTSA-205ENST00000419493 SF3B2Q13435 895 aaKnown RBP13.49□□□□□ -0.25
CTSA-205ENST00000419493 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
CTSA-205ENST00000419493 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
CTSA-205ENST00000419493 CCDC125Q86Z20 511 aa13.48□□□□□ -0.25
CTSA-205ENST00000419493 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
CTSA-205ENST00000419493 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 CAMTA1Q9Y6Y1 1673 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 ARHGEF25Q86VW2 580 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
CTSA-205ENST00000419493 EDC4Q6P2E9 1401 aaKnown RBP13.47□□□□□ -0.25
CTSA-205ENST00000419493 AATKQ6ZMQ8 1374 aa13.46□□□□□ -0.25
CTSA-205ENST00000419493 EIF4G2P78344 907 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSA-205ENST00000419493 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
CTSA-205ENST00000419493 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.26
CTSA-205ENST00000419493 SLIT3O75094 1523 aa13.45□□□□□ -0.26
CTSA-205ENST00000419493 PDE3BQ13370 1112 aa13.45□□□□□ -0.26
CTSA-205ENST00000419493 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CTSA-205ENST00000419493 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
CTSA-205ENST00000419493 BARGINQ6ZT62 677 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms