RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 POLR3AO14802 1390 aaPredicted RBP29.09■■■□□ 2.25
HLCS-203ENST00000419461 ITSN1Q15811 1721 aa29.08■■■□□ 2.25
HLCS-203ENST00000419461 GJD4Q96KN9 370 aaPredicted RBP29.08■■■□□ 2.25
HLCS-203ENST00000419461 QRICH2Q9H0J4 1663 aa29.08■■■□□ 2.25
HLCS-203ENST00000419461 NUTM2GQ5VZR2 741 aa29.04■■■□□ 2.24
HLCS-203ENST00000419461 PPIP5K1Q6PFW1 1433 aa29.03■■■□□ 2.24
HLCS-203ENST00000419461 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.02■■■□□ 2.24
HLCS-203ENST00000419461 RALGAPBQ86X10 1494 aa29.02■■■□□ 2.24
HLCS-203ENST00000419461 TONSLQ96HA7 1378 aa29.01■■■□□ 2.24
HLCS-203ENST00000419461 GLI3P10071 1580 aa29.01■■■□□ 2.24
HLCS-203ENST00000419461 CABP1Q9NZU7 370 aa29■■■□□ 2.23
HLCS-203ENST00000419461 CRYBG1Q9Y4K1 1723 aa29■■■□□ 2.23
HLCS-203ENST00000419461 PLCH1Q4KWH8 1693 aa28.99■■■□□ 2.23
HLCS-203ENST00000419461 VPS72Q15906 364 aa28.98■■■□□ 2.23
HLCS-203ENST00000419461 EVC2Q86UK5 1308 aa28.96■■■□□ 2.23
HLCS-203ENST00000419461 CARD11Q9BXL7 1154 aa28.96■■■□□ 2.23
HLCS-203ENST00000419461 BTG4Q9NY30 223 aa28.96■■■□□ 2.23
HLCS-203ENST00000419461 NWD2Q9ULI1 1742 aa28.94■■■□□ 2.22
HLCS-203ENST00000419461 ABTB2Q8N961 1025 aa28.93■■■□□ 2.22
HLCS-203ENST00000419461 CCDC9Q9Y3X0 531 aaKnown RBP28.92■■■□□ 2.22
HLCS-203ENST00000419461 KIAA0232Q92628 1395 aa28.91■■■□□ 2.22
HLCS-203ENST00000419461 ZC3H6P61129 1189 aaKnown RBP28.91■■■□□ 2.22
HLCS-203ENST00000419461 CHRNA2Q15822 529 aa28.91■■■□□ 2.22
HLCS-203ENST00000419461 PRDM11Q9NQV5 511 aa28.91■■■□□ 2.22
HLCS-203ENST00000419461 NRAPQ86VF7 1730 aa28.9■■■□□ 2.22
HLCS-203ENST00000419461 COL14A1Q05707 1796 aaKnown RBP28.9■■■□□ 2.22
HLCS-203ENST00000419461 ATAD2Q6PL18 1390 aa28.89■■■□□ 2.22
HLCS-203ENST00000419461 PHRF1Q9P1Y6 1649 aaKnown RBP28.88■■■□□ 2.21
HLCS-203ENST00000419461 SEPT12Q8IYM1 358 aa28.88■■■□□ 2.21
HLCS-203ENST00000419461 USP6P35125 1406 aa28.87■■■□□ 2.21
HLCS-203ENST00000419461 ONECUT3O60422 494 aaPredicted RBP28.87■■■□□ 2.21
HLCS-203ENST00000419461 USP19O94966 1318 aa28.87■■■□□ 2.21
HLCS-203ENST00000419461 SSH2Q76I76 1423 aa28.86■■■□□ 2.21
HLCS-203ENST00000419461 EP400Q96L91 3159 aa28.84■■■□□ 2.21
HLCS-203ENST00000419461 SBNO2Q9Y2G9 1366 aa28.83■■■□□ 2.21
HLCS-203ENST00000419461 FAM98CQ17RN3 349 aaKnown RBP28.82■■■□□ 2.2
HLCS-203ENST00000419461 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
HLCS-203ENST00000419461 BRWD3Q6RI45 1802 aa28.81■■■□□ 2.2
HLCS-203ENST00000419461 BRD4O60885 1362 aaPredicted RBP28.81■■■□□ 2.2
HLCS-203ENST00000419461 SPATA31A5Q5VU36 1347 aa28.81■■■□□ 2.2
HLCS-203ENST00000419461 SPATA31A7Q8IWB4 1347 aa28.81■■■□□ 2.2
HLCS-203ENST00000419461 GCP02774 474 aa28.81■■■□□ 2.2
HLCS-203ENST00000419461 NLRP13Q86W25 1043 aa28.81■■■□□ 2.2
HLCS-203ENST00000419461 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
HLCS-203ENST00000419461 NLRP6P59044 892 aa28.79■■■□□ 2.2
HLCS-203ENST00000419461 STRN4Q9NRL3 753 aa28.78■■■□□ 2.2
HLCS-203ENST00000419461 CPSF1Q10570 1443 aaKnown RBP28.77■■■□□ 2.2
HLCS-203ENST00000419461 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
HLCS-203ENST00000419461 CPDO75976 1380 aa28.76■■■□□ 2.2
HLCS-203ENST00000419461 ZNF692Q9BU19 519 aaPredicted RBP28.76■■■□□ 2.19
HLCS-203ENST00000419461 CAMTA1Q9Y6Y1 1673 aa28.75■■■□□ 2.19
HLCS-203ENST00000419461 ST20-MTHFSA0A0A6YYL1 179 aa28.75■■■□□ 2.19
HLCS-203ENST00000419461 TESK2Q96S53 571 aa28.75■■■□□ 2.19
HLCS-203ENST00000419461 PIK3C2AO00443 1686 aa28.74■■■□□ 2.19
HLCS-203ENST00000419461 SPATA31A1Q5TZJ5 1347 aa28.73■■■□□ 2.19
HLCS-203ENST00000419461 A0A0G2JS52 829 aa28.73■■■□□ 2.19
HLCS-203ENST00000419461 MYT1Q01538 1121 aa28.73■■■□□ 2.19
HLCS-203ENST00000419461 KRT27Q7Z3Y8 459 aa28.73■■■□□ 2.19
HLCS-203ENST00000419461 AKAP12Q02952 1782 aa28.73■■■□□ 2.19
HLCS-203ENST00000419461 CD163L1Q9NR16 1453 aa28.72■■■□□ 2.19
HLCS-203ENST00000419461 SLC12A5Q9H2X9 1139 aa28.72■■■□□ 2.19
HLCS-203ENST00000419461 KTN1Q86UP2 1357 aaKnown RBP28.72■■■□□ 2.19
HLCS-203ENST00000419461 SLIT3O75094 1523 aa28.71■■■□□ 2.19
HLCS-203ENST00000419461 LARP1Q6PKG0 1096 aaKnown RBP28.71■■■□□ 2.19
HLCS-203ENST00000419461 ZRANB1Q9UGI0 708 aa28.71■■■□□ 2.19
HLCS-203ENST00000419461 LMO7Q8WWI1 1683 aa28.7■■■□□ 2.19
HLCS-203ENST00000419461 TMC1Q8TDI8 760 aa28.7■■■□□ 2.18
HLCS-203ENST00000419461 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
HLCS-203ENST00000419461 EVA1CP58658 441 aa28.69■■■□□ 2.18
HLCS-203ENST00000419461 FAM182BQ5T319 152 aa28.68■■■□□ 2.18
HLCS-203ENST00000419461 USP35Q9P2H5 1018 aa28.68■■■□□ 2.18
HLCS-203ENST00000419461 CCDC125Q86Z20 511 aa28.66■■■□□ 2.18
HLCS-203ENST00000419461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.66■■■□□ 2.18
HLCS-203ENST00000419461 TTC21AQ8NDW8 1320 aa28.66■■■□□ 2.18
HLCS-203ENST00000419461 THSD7AQ9UPZ6 1657 aa28.65■■■□□ 2.18
HLCS-203ENST00000419461 SOX12O15370 315 aa28.64■■■□□ 2.18
HLCS-203ENST00000419461 BLMP54132 1417 aaPredicted RBP28.63■■■□□ 2.17
HLCS-203ENST00000419461 NME9Q86XW9 330 aa28.63■■■□□ 2.17
HLCS-203ENST00000419461 PUS7Q96PZ0 661 aaKnown RBP28.63■■■□□ 2.17
HLCS-203ENST00000419461 AXIN2Q9Y2T1 843 aa28.63■■■□□ 2.17
HLCS-203ENST00000419461 MON2Q7Z3U7 1717 aa28.63■■■□□ 2.17
HLCS-203ENST00000419461 AATKQ6ZMQ8 1374 aa28.62■■■□□ 2.17
HLCS-203ENST00000419461 COL5A2P05997 1499 aaPredicted RBP28.62■■■□□ 2.17
HLCS-203ENST00000419461 DEFB132Q7Z7B7 95 aa28.62■■■□□ 2.17
HLCS-203ENST00000419461 ARHGEF25Q86VW2 580 aa28.61■■■□□ 2.17
HLCS-203ENST00000419461 USP47Q96K76 1375 aa28.61■■■□□ 2.17
HLCS-203ENST00000419461 CLSPNQ9HAW4 1339 aa28.6■■■□□ 2.17
HLCS-203ENST00000419461 COL18A1P39060 1754 aa28.6■■■□□ 2.17
HLCS-203ENST00000419461 A0A1W2PP64 1363 aa28.59■■■□□ 2.17
HLCS-203ENST00000419461 BARGINQ6ZT62 677 aa28.58■■■□□ 2.17
HLCS-203ENST00000419461 HDGFL2Q7Z4V5 671 aaPredicted RBP28.58■■■□□ 2.17
HLCS-203ENST00000419461 TCP11L2Q8N4U5 519 aa28.58■■■□□ 2.17
HLCS-203ENST00000419461 TIMELESSQ9UNS1 1208 aa28.57■■■□□ 2.16
HLCS-203ENST00000419461 USP31Q70CQ4 1352 aa28.57■■■□□ 2.16
HLCS-203ENST00000419461 NFAT5O94916 1531 aa28.57■■■□□ 2.16
HLCS-203ENST00000419461 KCNH5Q8NCM2 988 aa28.56■■■□□ 2.16
HLCS-203ENST00000419461 TERF2IPQ9NYB0 399 aa28.55■■■□□ 2.16
HLCS-203ENST00000419461 EDC4Q6P2E9 1401 aaKnown RBP28.53■■■□□ 2.16
HLCS-203ENST00000419461 CRB1P82279 1406 aa28.52■■■□□ 2.16
HLCS-203ENST00000419461 SF3B2Q13435 895 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms