RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 MSH6P52701 1360 aa13.52□□□□□ -0.25
HMGA1P6-201ENST00000418454 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
HMGA1P6-201ENST00000418454 MST1RQ04912 1400 aa13.51□□□□□ -0.25
HMGA1P6-201ENST00000418454 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
HMGA1P6-201ENST00000418454 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
HMGA1P6-201ENST00000418454 PNNQ9H307 717 aaKnown RBP13.51□□□□□ -0.25
HMGA1P6-201ENST00000418454 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
HMGA1P6-201ENST00000418454 MTHFSP49914 203 aa13.5□□□□□ -0.25
HMGA1P6-201ENST00000418454 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
HMGA1P6-201ENST00000418454 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
HMGA1P6-201ENST00000418454 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 PSME1Q06323 249 aa13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
HMGA1P6-201ENST00000418454 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
HMGA1P6-201ENST00000418454 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
HMGA1P6-201ENST00000418454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
HMGA1P6-201ENST00000418454 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
HMGA1P6-201ENST00000418454 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
HMGA1P6-201ENST00000418454 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
HMGA1P6-201ENST00000418454 NME9Q86XW9 330 aa13.46□□□□□ -0.25
HMGA1P6-201ENST00000418454 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
HMGA1P6-201ENST00000418454 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
HMGA1P6-201ENST00000418454 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
HMGA1P6-201ENST00000418454 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
HMGA1P6-201ENST00000418454 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
HMGA1P6-201ENST00000418454 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
HMGA1P6-201ENST00000418454 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
HMGA1P6-201ENST00000418454 ZNF335Q9H4Z2 1342 aaPredicted RBP13.43□□□□□ -0.26
HMGA1P6-201ENST00000418454 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
HMGA1P6-201ENST00000418454 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
HMGA1P6-201ENST00000418454 FCHSD2O94868 740 aa13.42□□□□□ -0.26
HMGA1P6-201ENST00000418454 NLRP6P59044 892 aa13.42□□□□□ -0.26
HMGA1P6-201ENST00000418454 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
HMGA1P6-201ENST00000418454 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
HMGA1P6-201ENST00000418454 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
HMGA1P6-201ENST00000418454 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
HMGA1P6-201ENST00000418454 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
HMGA1P6-201ENST00000418454 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
HMGA1P6-201ENST00000418454 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
HMGA1P6-201ENST00000418454 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
HMGA1P6-201ENST00000418454 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
HMGA1P6-201ENST00000418454 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
HMGA1P6-201ENST00000418454 FOXO3O43524 673 aa13.39□□□□□ -0.27
HMGA1P6-201ENST00000418454 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
HMGA1P6-201ENST00000418454 IL13P35225 146 aa13.38□□□□□ -0.27
HMGA1P6-201ENST00000418454 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
HMGA1P6-201ENST00000418454 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
HMGA1P6-201ENST00000418454 FLT4P35916 1363 aa13.37□□□□□ -0.27
HMGA1P6-201ENST00000418454 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
HMGA1P6-201ENST00000418454 USP19O94966 1318 aa13.37□□□□□ -0.27
HMGA1P6-201ENST00000418454 BRINP3Q76B58 766 aa13.36□□□□□ -0.27
HMGA1P6-201ENST00000418454 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
HMGA1P6-201ENST00000418454 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
HMGA1P6-201ENST00000418454 SOS2Q07890 1332 aaPredicted RBP13.36□□□□□ -0.27
HMGA1P6-201ENST00000418454 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
HMGA1P6-201ENST00000418454 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
HMGA1P6-201ENST00000418454 NEFMP07197 916 aa13.35□□□□□ -0.27
HMGA1P6-201ENST00000418454 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
HMGA1P6-201ENST00000418454 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
HMGA1P6-201ENST00000418454 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
HMGA1P6-201ENST00000418454 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 SLIT3O75094 1523 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 IP6K1Q92551 441 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
HMGA1P6-201ENST00000418454 TRPM3Q9HCF6 1732 aaPredicted RBP13.33□□□□□ -0.27
HMGA1P6-201ENST00000418454 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
HMGA1P6-201ENST00000418454 GCP02774 474 aa13.33□□□□□ -0.28
HMGA1P6-201ENST00000418454 WDR63Q8IWG1 891 aa13.33□□□□□ -0.28
HMGA1P6-201ENST00000418454 PXDNQ92626 1479 aa13.33□□□□□ -0.28
HMGA1P6-201ENST00000418454 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
HMGA1P6-201ENST00000418454 AMPHP49418 695 aa13.32□□□□□ -0.28
HMGA1P6-201ENST00000418454 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
HMGA1P6-201ENST00000418454 ABCC6O95255 1503 aa13.32□□□□□ -0.28
HMGA1P6-201ENST00000418454 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
HMGA1P6-201ENST00000418454 RRS1Q15050 365 aaKnown RBP13.31□□□□□ -0.28
HMGA1P6-201ENST00000418454 APAF1O14727 1248 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 TOM1O60784 492 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 HOXC9P31274 260 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 MAPK8IP3Q9UPT6 1336 aa13.3□□□□□ -0.28
HMGA1P6-201ENST00000418454 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms