RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 KIF16BQ96L93 1317 aa14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 FRAT2O75474 233 aaPredicted RBP14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 SEC24BO95487 1268 aa14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 TRIM27P14373 513 aa14.82□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 MLECQ14165 292 aa14.81□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 YEATS2Q9ULM3 1422 aa14.81□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 IL16Q14005 1332 aa14.81□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 FCHSD2O94868 740 aa14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 CALD1Q05682 793 aaKnown RBP14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 DIP2CQ9Y2E4 1556 aa14.79□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 ZC3H13Q5T200 1668 aaKnown RBP14.79□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 WAPLQ7Z5K2 1190 aa14.78□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 HMOX1P09601 288 aa14.77□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 TMEM57Q8N5G2 664 aa14.77□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 USP19O94966 1318 aa14.76□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 PIK3C2BO00750 1634 aa14.75□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ALDH1L2Q3SY69 923 aa14.75□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 FBLN1P23142 703 aa14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 C22orf23Q9BZE7 217 aa14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 HDGFP51858 240 aaKnown RBP14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 SPRYD3Q8NCJ5 442 aa14.74□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 PTPRMP28827 1452 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 COG3Q96JB2 828 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 POLKQ9UBT6 870 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ELL2O00472 640 aaPredicted RBP14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 GNAI1P63096 354 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 LMOD3Q0VAK6 560 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 MED14O60244 1454 aa14.71□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 HSCBQ8IWL3 235 aa14.71□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 ZBTB40Q9NUA8 1239 aa14.71□□□□□ -0.05
CSPG4P3Y-201ENST00000418188 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 EMILIN1Q9Y6C2 1016 aa14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 ADGRB2O60241 1585 aa14.69□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 ANKRD45Q5TZF3 282 aa14.69□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 NME9Q86XW9 330 aa14.69□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 RIMS2Q9UQ26 1411 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 PHACTR3Q96KR7 559 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 BRPF3Q9ULD4 1205 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 HSP90AA1P07900 732 aaKnown RBP14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 CHD1LQ86WJ1 897 aa14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 PREX1Q8TCU6 1659 aa14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 RRS1Q15050 365 aaKnown RBP14.66□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 PPIP5K1Q6PFW1 1433 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 RICTORQ6R327 1708 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 NUCB1Q02818 461 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 GCC1Q96CN9 775 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 ATP7BP35670 1465 aa14.65□□□□□ -0.06
CSPG4P3Y-201ENST00000418188 VAMP4O75379 141 aa14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 NLRP1Q9C000 1473 aa14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 EDC4Q6P2E9 1401 aaKnown RBP14.64□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ZRANB1Q9UGI0 708 aa14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 IL13P35225 146 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms