RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 CABP1Q9NZU7 370 aa23.24■■□□□ 1.31
DDR1-231ENST00000417521 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
DDR1-231ENST00000417521 FAM83GA6ND36 823 aa23.23■■□□□ 1.31
DDR1-231ENST00000417521 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
DDR1-231ENST00000417521 SBNO2Q9Y2G9 1366 aa23.22■■□□□ 1.31
DDR1-231ENST00000417521 GJD4Q96KN9 370 aaPredicted RBP23.22■■□□□ 1.31
DDR1-231ENST00000417521 BRD4O60885 1362 aaPredicted RBP23.21■■□□□ 1.31
DDR1-231ENST00000417521 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
DDR1-231ENST00000417521 TIMELESSQ9UNS1 1208 aa23.21■■□□□ 1.31
DDR1-231ENST00000417521 RGS12O14924 1447 aa23.2■■□□□ 1.3
DDR1-231ENST00000417521 QRICH2Q9H0J4 1663 aa23.2■■□□□ 1.3
DDR1-231ENST00000417521 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
DDR1-231ENST00000417521 ABTB2Q8N961 1025 aa23.18■■□□□ 1.3
DDR1-231ENST00000417521 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
DDR1-231ENST00000417521 VPS72Q15906 364 aa23.17■■□□□ 1.3
DDR1-231ENST00000417521 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
DDR1-231ENST00000417521 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
DDR1-231ENST00000417521 NUTM2GQ5VZR2 741 aa23.16■■□□□ 1.3
DDR1-231ENST00000417521 NLRP13Q86W25 1043 aa23.15■■□□□ 1.3
DDR1-231ENST00000417521 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
DDR1-231ENST00000417521 MARF1Q9Y4F3 1742 aaKnown RBP23.14■■□□□ 1.3
DDR1-231ENST00000417521 USP6P35125 1406 aa23.14■■□□□ 1.29
DDR1-231ENST00000417521 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.29
DDR1-231ENST00000417521 BTG4Q9NY30 223 aa23.14■■□□□ 1.29
DDR1-231ENST00000417521 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
DDR1-231ENST00000417521 PUS7Q96PZ0 661 aaKnown RBP23.12■■□□□ 1.29
DDR1-231ENST00000417521 USP19O94966 1318 aa23.12■■□□□ 1.29
DDR1-231ENST00000417521 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
DDR1-231ENST00000417521 SSH2Q76I76 1423 aa23.1■■□□□ 1.29
DDR1-231ENST00000417521 KIAA0232Q92628 1395 aa23.1■■□□□ 1.29
DDR1-231ENST00000417521 ZC3H6P61129 1189 aaKnown RBP23.1■■□□□ 1.29
DDR1-231ENST00000417521 CCDC9Q9Y3X0 531 aaKnown RBP23.1■■□□□ 1.29
DDR1-231ENST00000417521 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
DDR1-231ENST00000417521 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
DDR1-231ENST00000417521 TESK2Q96S53 571 aa23.09■■□□□ 1.29
DDR1-231ENST00000417521 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.08■■□□□ 1.29
DDR1-231ENST00000417521 GCP02774 474 aa23.08■■□□□ 1.29
DDR1-231ENST00000417521 NLRP6P59044 892 aa23.08■■□□□ 1.29
DDR1-231ENST00000417521 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
DDR1-231ENST00000417521 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
DDR1-231ENST00000417521 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
DDR1-231ENST00000417521 CPDO75976 1380 aa23.05■■□□□ 1.28
DDR1-231ENST00000417521 TTC21AQ8NDW8 1320 aa23.05■■□□□ 1.28
DDR1-231ENST00000417521 GLI3P10071 1580 aa23.04■■□□□ 1.28
DDR1-231ENST00000417521 NWD2Q9ULI1 1742 aa23.04■■□□□ 1.28
DDR1-231ENST00000417521 SEPT12Q8IYM1 358 aa23.04■■□□□ 1.28
DDR1-231ENST00000417521 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
DDR1-231ENST00000417521 KTN1Q86UP2 1357 aaKnown RBP23.04■■□□□ 1.28
DDR1-231ENST00000417521 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
DDR1-231ENST00000417521 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
DDR1-231ENST00000417521 SLC12A5Q9H2X9 1139 aa23.02■■□□□ 1.28
DDR1-231ENST00000417521 PLCH1Q4KWH8 1693 aa23.02■■□□□ 1.28
DDR1-231ENST00000417521 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.27
DDR1-231ENST00000417521 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.27
DDR1-231ENST00000417521 USP47Q96K76 1375 aa23.01■■□□□ 1.27
DDR1-231ENST00000417521 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
DDR1-231ENST00000417521 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
DDR1-231ENST00000417521 EVA1CP58658 441 aa22.98■■□□□ 1.27
DDR1-231ENST00000417521 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
DDR1-231ENST00000417521 KCNH5Q8NCM2 988 aa22.98■■□□□ 1.27
DDR1-231ENST00000417521 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
DDR1-231ENST00000417521 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
DDR1-231ENST00000417521 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
DDR1-231ENST00000417521 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
DDR1-231ENST00000417521 TMF1P82094 1093 aa22.97■■□□□ 1.27
DDR1-231ENST00000417521 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
DDR1-231ENST00000417521 SRCAPQ6ZRS2 3230 aa22.96■■□□□ 1.27
DDR1-231ENST00000417521 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
DDR1-231ENST00000417521 SPATA31A1Q5TZJ5 1347 aa22.96■■□□□ 1.27
DDR1-231ENST00000417521 SLIT3O75094 1523 aa22.95■■□□□ 1.26
DDR1-231ENST00000417521 A0A0G2JS52 829 aa22.95■■□□□ 1.26
DDR1-231ENST00000417521 MYT1Q01538 1121 aa22.95■■□□□ 1.26
DDR1-231ENST00000417521 KRT27Q7Z3Y8 459 aa22.95■■□□□ 1.26
DDR1-231ENST00000417521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.95■■□□□ 1.26
DDR1-231ENST00000417521 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
DDR1-231ENST00000417521 AATKQ6ZMQ8 1374 aa22.94■■□□□ 1.26
DDR1-231ENST00000417521 USP31Q70CQ4 1352 aa22.93■■□□□ 1.26
DDR1-231ENST00000417521 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
DDR1-231ENST00000417521 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
DDR1-231ENST00000417521 CAMTA1Q9Y6Y1 1673 aa22.92■■□□□ 1.26
DDR1-231ENST00000417521 EDC4Q6P2E9 1401 aaKnown RBP22.92■■□□□ 1.26
DDR1-231ENST00000417521 A0A1W2PP64 1363 aa22.92■■□□□ 1.26
DDR1-231ENST00000417521 ZBTB7CA1YPR0 619 aa22.92■■□□□ 1.26
DDR1-231ENST00000417521 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
DDR1-231ENST00000417521 NME9Q86XW9 330 aa22.91■■□□□ 1.26
DDR1-231ENST00000417521 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
DDR1-231ENST00000417521 BARGINQ6ZT62 677 aa22.9■■□□□ 1.26
DDR1-231ENST00000417521 USP35Q9P2H5 1018 aa22.89■■□□□ 1.25
DDR1-231ENST00000417521 ZRANB1Q9UGI0 708 aa22.89■■□□□ 1.25
DDR1-231ENST00000417521 TCP11L2Q8N4U5 519 aa22.88■■□□□ 1.25
DDR1-231ENST00000417521 THRAP3Q9Y2W1 955 aaKnown RBP22.88■■□□□ 1.25
DDR1-231ENST00000417521 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
DDR1-231ENST00000417521 SOX12O15370 315 aa22.87■■□□□ 1.25
DDR1-231ENST00000417521 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
DDR1-231ENST00000417521 COL5A2P05997 1499 aaPredicted RBP22.86■■□□□ 1.25
DDR1-231ENST00000417521 AXIN2Q9Y2T1 843 aa22.86■■□□□ 1.25
DDR1-231ENST00000417521 ANKRD36BQ8N2N9 1353 aa22.85■■□□□ 1.25
DDR1-231ENST00000417521 EP400Q96L91 3159 aa22.85■■□□□ 1.25
DDR1-231ENST00000417521 BLMP54132 1417 aaPredicted RBP22.85■■□□□ 1.25
DDR1-231ENST00000417521 MON2Q7Z3U7 1717 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms