RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
GABRE-202ENST00000417300 EVC2Q86UK5 1308 aa16.32■□□□□ 0.2
GABRE-202ENST00000417300 POGKQ9P215 609 aa16.32■□□□□ 0.2
GABRE-202ENST00000417300 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
GABRE-202ENST00000417300 COL22A1Q8NFW1 1626 aaPredicted RBP16.31■□□□□ 0.2
GABRE-202ENST00000417300 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
GABRE-202ENST00000417300 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
GABRE-202ENST00000417300 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
GABRE-202ENST00000417300 ADGRB2O60241 1585 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 A0A0G2JS52 829 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
GABRE-202ENST00000417300 MYT1Q01538 1121 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
GABRE-202ENST00000417300 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 SPON1Q9HCB6 807 aa16.3■□□□□ 0.2
GABRE-202ENST00000417300 ADGRL3Q9HAR2 1447 aa16.28■□□□□ 0.2
GABRE-202ENST00000417300 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
GABRE-202ENST00000417300 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
GABRE-202ENST00000417300 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
GABRE-202ENST00000417300 VPS72Q15906 364 aa16.27■□□□□ 0.2
GABRE-202ENST00000417300 SLIT2O94813 1529 aa16.27■□□□□ 0.2
GABRE-202ENST00000417300 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
GABRE-202ENST00000417300 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
GABRE-202ENST00000417300 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
GABRE-202ENST00000417300 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
GABRE-202ENST00000417300 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
GABRE-202ENST00000417300 PANK3Q9H999 370 aa16.25■□□□□ 0.19
GABRE-202ENST00000417300 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
GABRE-202ENST00000417300 KCNQ2O43526 872 aa16.24■□□□□ 0.19
GABRE-202ENST00000417300 GIGYF1O75420 1035 aaPredicted RBP16.24■□□□□ 0.19
GABRE-202ENST00000417300 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
GABRE-202ENST00000417300 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
GABRE-202ENST00000417300 UTRNP46939 3433 aa16.23■□□□□ 0.19
GABRE-202ENST00000417300 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
GABRE-202ENST00000417300 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
GABRE-202ENST00000417300 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
GABRE-202ENST00000417300 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
GABRE-202ENST00000417300 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.19
GABRE-202ENST00000417300 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
GABRE-202ENST00000417300 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
GABRE-202ENST00000417300 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
GABRE-202ENST00000417300 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
GABRE-202ENST00000417300 WASLO00401 505 aaPredicted RBP16.2■□□□□ 0.18
GABRE-202ENST00000417300 FAM182BQ5T319 152 aa16.2■□□□□ 0.18
GABRE-202ENST00000417300 ANKRD36BQ8N2N9 1353 aa16.2■□□□□ 0.18
GABRE-202ENST00000417300 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
GABRE-202ENST00000417300 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
GABRE-202ENST00000417300 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
GABRE-202ENST00000417300 RALBP1Q15311 655 aa16.18■□□□□ 0.18
GABRE-202ENST00000417300 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
GABRE-202ENST00000417300 SLC12A5Q9H2X9 1139 aa16.18■□□□□ 0.18
GABRE-202ENST00000417300 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
GABRE-202ENST00000417300 ATP7BP35670 1465 aa16.17■□□□□ 0.18
GABRE-202ENST00000417300 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
GABRE-202ENST00000417300 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
GABRE-202ENST00000417300 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
GABRE-202ENST00000417300 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
GABRE-202ENST00000417300 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
GABRE-202ENST00000417300 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
GABRE-202ENST00000417300 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
GABRE-202ENST00000417300 APBA3O96018 575 aa16.15■□□□□ 0.18
GABRE-202ENST00000417300 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
GABRE-202ENST00000417300 A0A1W2PP64 1363 aa16.14■□□□□ 0.17
GABRE-202ENST00000417300 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
GABRE-202ENST00000417300 FMN2Q9NZ56 1722 aa16.14■□□□□ 0.17
GABRE-202ENST00000417300 FOXO3O43524 673 aa16.14■□□□□ 0.17
GABRE-202ENST00000417300 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
GABRE-202ENST00000417300 TRIM37O94972 964 aa16.13■□□□□ 0.17
GABRE-202ENST00000417300 PXDNQ92626 1479 aa16.13■□□□□ 0.17
GABRE-202ENST00000417300 MYBBP1AQ9BQG0 1328 aaKnown RBP16.13■□□□□ 0.17
GABRE-202ENST00000417300 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
GABRE-202ENST00000417300 CHD4Q14839 1912 aa16.12■□□□□ 0.17
GABRE-202ENST00000417300 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
GABRE-202ENST00000417300 AKAP12Q02952 1782 aa16.12■□□□□ 0.17
GABRE-202ENST00000417300 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
GABRE-202ENST00000417300 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
GABRE-202ENST00000417300 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
GABRE-202ENST00000417300 NUDT16Q96DE0 195 aaKnown RBP16.11■□□□□ 0.17
GABRE-202ENST00000417300 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
GABRE-202ENST00000417300 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
GABRE-202ENST00000417300 NSD2O96028 1365 aa16.11■□□□□ 0.17
GABRE-202ENST00000417300 CPSF1Q10570 1443 aaKnown RBP16.11■□□□□ 0.17
GABRE-202ENST00000417300 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
GABRE-202ENST00000417300 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
GABRE-202ENST00000417300 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
GABRE-202ENST00000417300 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
GABRE-202ENST00000417300 BRD4O60885 1362 aaPredicted RBP16.1■□□□□ 0.17
GABRE-202ENST00000417300 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.17
GABRE-202ENST00000417300 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.16
GABRE-202ENST00000417300 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
GABRE-202ENST00000417300 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
GABRE-202ENST00000417300 NLRP13Q86W25 1043 aa16.07■□□□□ 0.16
GABRE-202ENST00000417300 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
GABRE-202ENST00000417300 RGPD8O14715 1765 aaPredicted RBP16.06■□□□□ 0.16
GABRE-202ENST00000417300 NRKQ7Z2Y5 1582 aa16.06■□□□□ 0.16
GABRE-202ENST00000417300 EDC4Q6P2E9 1401 aaKnown RBP16.06■□□□□ 0.16
GABRE-202ENST00000417300 SPATA31A3Q5VYP0 1347 aa16.06■□□□□ 0.16
GABRE-202ENST00000417300 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
GABRE-202ENST00000417300 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms