RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 FCHSD2O94868 740 aa15.8■□□□□ 0.12
SCAF8-203ENST00000417268 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
SCAF8-203ENST00000417268 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
SCAF8-203ENST00000417268 MSH5O43196 834 aa15.8■□□□□ 0.12
SCAF8-203ENST00000417268 TRIM6-TRIM34B2RNG4 842 aa15.79■□□□□ 0.12
SCAF8-203ENST00000417268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.122e-9■■□□□ 13.9
SCAF8-203ENST00000417268 LRPPRCP42704 1394 aaKnown RBP15.79■□□□□ 0.12
SCAF8-203ENST00000417268 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
SCAF8-203ENST00000417268 NME9Q86XW9 330 aa15.78■□□□□ 0.12
SCAF8-203ENST00000417268 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
SCAF8-203ENST00000417268 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
SCAF8-203ENST00000417268 G3V3G9 751 aa15.77■□□□□ 0.11
SCAF8-203ENST00000417268 DCAF8Q5TAQ9 597 aa15.77■□□□□ 0.11
SCAF8-203ENST00000417268 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.11
SCAF8-203ENST00000417268 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
SCAF8-203ENST00000417268 FRAT2O75474 233 aaPredicted RBP15.76■□□□□ 0.11
SCAF8-203ENST00000417268 RIC3Q7Z5B4 369 aa15.75■□□□□ 0.11
SCAF8-203ENST00000417268 WDR63Q8IWG1 891 aa15.75■□□□□ 0.11
SCAF8-203ENST00000417268 SYAP1Q96A49 352 aaPredicted RBP15.75■□□□□ 0.11
SCAF8-203ENST00000417268 KRT28Q7Z3Y7 464 aa15.75■□□□□ 0.11
SCAF8-203ENST00000417268 NSD2O96028 1365 aa15.75■□□□□ 0.11
SCAF8-203ENST00000417268 AAMPQ13685 434 aa15.74■□□□□ 0.11
SCAF8-203ENST00000417268 ANKRD45Q5TZF3 282 aa15.74■□□□□ 0.11
SCAF8-203ENST00000417268 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
SCAF8-203ENST00000417268 MSH6P52701 1360 aa15.74■□□□□ 0.11
SCAF8-203ENST00000417268 PZPP20742 1482 aa15.74■□□□□ 0.11
SCAF8-203ENST00000417268 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
SCAF8-203ENST00000417268 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
SCAF8-203ENST00000417268 TWISTNBQ3B726 338 aaPredicted RBP15.73■□□□□ 0.11
SCAF8-203ENST00000417268 TBX22Q9Y458 520 aa15.73■□□□□ 0.11
SCAF8-203ENST00000417268 CABP4P57796 275 aa15.73■□□□□ 0.11
SCAF8-203ENST00000417268 DDX49Q9Y6V7 483 aaKnown RBP15.73■□□□□ 0.11
SCAF8-203ENST00000417268 ACEP12821 1306 aa15.73■□□□□ 0.11
SCAF8-203ENST00000417268 CFAP74Q9C0B2 1584 aa15.73■□□□□ 0.11
SCAF8-203ENST00000417268 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
SCAF8-203ENST00000417268 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
SCAF8-203ENST00000417268 ZFYVE16Q7Z3T8 1539 aa15.72■□□□□ 0.11
SCAF8-203ENST00000417268 ARHGEF5Q12774 1597 aa15.72■□□□□ 0.11
SCAF8-203ENST00000417268 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 FAM13BQ9NYF5 915 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 TAOK2Q9UL54 1235 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 MYO5CQ9NQX4 1742 aa15.71■□□□□ 0.11
SCAF8-203ENST00000417268 CT47B1P0C2W7 299 aaPredicted RBP15.71■□□□□ 0.1
SCAF8-203ENST00000417268 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.1
SCAF8-203ENST00000417268 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.1
SCAF8-203ENST00000417268 HSPA2P54652 639 aa15.7■□□□□ 0.1
SCAF8-203ENST00000417268 SKOR2Q2VWA4 1001 aaPredicted RBP15.7■□□□□ 0.1
SCAF8-203ENST00000417268 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
SCAF8-203ENST00000417268 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 HSP90AB4PQ58FF6 505 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 FAM43AQ8N2R8 423 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 EMILIN1Q9Y6C2 1016 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 CCDC184Q52MB2 194 aa15.69■□□□□ 0.1
SCAF8-203ENST00000417268 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
SCAF8-203ENST00000417268 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
SCAF8-203ENST00000417268 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
SCAF8-203ENST00000417268 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAF8-203ENST00000417268 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
SCAF8-203ENST00000417268 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
SCAF8-203ENST00000417268 UHRF1BP1Q6BDS2 1440 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 TTC21AQ8NDW8 1320 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 GNAI3P08754 354 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 GNAT3A8MTJ3 354 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
SCAF8-203ENST00000417268 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-203ENST00000417268 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
SCAF8-203ENST00000417268 EIF2AK4Q9P2K8 1649 aaKnown RBP15.67■□□□□ 0.1
SCAF8-203ENST00000417268 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 PANK1Q8TE04 598 aa15.67■□□□□ 0.1
SCAF8-203ENST00000417268 NCKAP5LQ9HCH0 1330 aa15.66■□□□□ 0.1
SCAF8-203ENST00000417268 TOM1O60784 492 aa15.66■□□□□ 0.1
SCAF8-203ENST00000417268 TTC21BQ7Z4L5 1316 aa15.66■□□□□ 0.1
SCAF8-203ENST00000417268 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
SCAF8-203ENST00000417268 HSP90B1P14625 803 aaKnown RBP15.66■□□□□ 0.1
SCAF8-203ENST00000417268 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
SCAF8-203ENST00000417268 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
SCAF8-203ENST00000417268 ZNF428Q96B54 188 aa15.65■□□□□ 0.1
SCAF8-203ENST00000417268 ERCC6L2Q5T890 1561 aa15.65■□□□□ 0.1
SCAF8-203ENST00000417268 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
SCAF8-203ENST00000417268 KCNA6P17658 529 aa15.65■□□□□ 0.1
SCAF8-203ENST00000417268 RILPL2Q969X0 211 aa15.65■□□□□ 0.1
SCAF8-203ENST00000417268 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
SCAF8-203ENST00000417268 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SCAF8-203ENST00000417268 KIF6Q6ZMV9 814 aa15.64■□□□□ 0.09
SCAF8-203ENST00000417268 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SCAF8-203ENST00000417268 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
SCAF8-203ENST00000417268 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
SCAF8-203ENST00000417268 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
SCAF8-203ENST00000417268 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
SCAF8-203ENST00000417268 BTBD11A6QL63 1104 aa15.63■□□□□ 0.09
SCAF8-203ENST00000417268 YTHDC2Q9H6S0 1430 aaKnown RBP15.63■□□□□ 0.09
SCAF8-203ENST00000417268 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
SCAF8-203ENST00000417268 TESK2Q96S53 571 aa15.62■□□□□ 0.09
SCAF8-203ENST00000417268 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms