RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 PTPRMP28827 1452 aa16.3■□□□□ 0.2
LRRTM1-205ENST00000417012 YTHDC2Q9H6S0 1430 aaKnown RBP16.29■□□□□ 0.2
LRRTM1-205ENST00000417012 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
LRRTM1-205ENST00000417012 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
LRRTM1-205ENST00000417012 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
LRRTM1-205ENST00000417012 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
LRRTM1-205ENST00000417012 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
LRRTM1-205ENST00000417012 L1TD1Q5T7N2 865 aaKnown RBP16.27■□□□□ 0.2
LRRTM1-205ENST00000417012 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
LRRTM1-205ENST00000417012 ALKQ9UM73 1620 aa16.27■□□□□ 0.19
LRRTM1-205ENST00000417012 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
LRRTM1-205ENST00000417012 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
LRRTM1-205ENST00000417012 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
LRRTM1-205ENST00000417012 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
LRRTM1-205ENST00000417012 MVPQ14764 893 aaKnown RBP16.25■□□□□ 0.19
LRRTM1-205ENST00000417012 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
LRRTM1-205ENST00000417012 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
LRRTM1-205ENST00000417012 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
LRRTM1-205ENST00000417012 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
LRRTM1-205ENST00000417012 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
LRRTM1-205ENST00000417012 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
LRRTM1-205ENST00000417012 FYB1O15117 783 aa16.23■□□□□ 0.19
LRRTM1-205ENST00000417012 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 NSD2O96028 1365 aa16.22■□□□□ 0.19
LRRTM1-205ENST00000417012 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
LRRTM1-205ENST00000417012 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
LRRTM1-205ENST00000417012 FBLN1P23142 703 aa16.21■□□□□ 0.19
LRRTM1-205ENST00000417012 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
LRRTM1-205ENST00000417012 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
LRRTM1-205ENST00000417012 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.18
LRRTM1-205ENST00000417012 AGLP35573 1532 aa16.2■□□□□ 0.18
LRRTM1-205ENST00000417012 RIMS2Q9UQ26 1411 aa16.2■□□□□ 0.18
LRRTM1-205ENST00000417012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
LRRTM1-205ENST00000417012 ADGRB2O60241 1585 aa16.19■□□□□ 0.18
LRRTM1-205ENST00000417012 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
LRRTM1-205ENST00000417012 C22orf23Q9BZE7 217 aa16.19■□□□□ 0.18
LRRTM1-205ENST00000417012 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
LRRTM1-205ENST00000417012 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 KIF13AQ9H1H9 1805 aa16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
LRRTM1-205ENST00000417012 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
LRRTM1-205ENST00000417012 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
LRRTM1-205ENST00000417012 MCM4P33991 863 aa16.17■□□□□ 0.18
LRRTM1-205ENST00000417012 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
LRRTM1-205ENST00000417012 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
LRRTM1-205ENST00000417012 GOLGA6L3A6NEY3 463 aa16.16■□□□□ 0.18
LRRTM1-205ENST00000417012 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
LRRTM1-205ENST00000417012 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
LRRTM1-205ENST00000417012 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
LRRTM1-205ENST00000417012 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
LRRTM1-205ENST00000417012 TRIM27P14373 513 aa16.15■□□□□ 0.18
LRRTM1-205ENST00000417012 METP08581 1390 aa16.15■□□□□ 0.18
LRRTM1-205ENST00000417012 EXOSC9Q06265 439 aaKnown RBP16.14■□□□□ 0.17
LRRTM1-205ENST00000417012 ARXQ96QS3 562 aa16.14■□□□□ 0.17
LRRTM1-205ENST00000417012 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
LRRTM1-205ENST00000417012 PLEKHF1Q96S99 279 aa16.14■□□□□ 0.17
LRRTM1-205ENST00000417012 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
LRRTM1-205ENST00000417012 SETD1AO15047 1707 aaKnown RBP16.13■□□□□ 0.17
LRRTM1-205ENST00000417012 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
LRRTM1-205ENST00000417012 ANKRD26Q9UPS8 1709 aa16.12■□□□□ 0.17
LRRTM1-205ENST00000417012 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
LRRTM1-205ENST00000417012 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
LRRTM1-205ENST00000417012 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
LRRTM1-205ENST00000417012 FSD2A1L4K1 749 aa16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 TMPOP42166 694 aaKnown RBP16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
LRRTM1-205ENST00000417012 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 TRAK2O60296 914 aa16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
LRRTM1-205ENST00000417012 IL16Q14005 1332 aa16.09■□□□□ 0.17
LRRTM1-205ENST00000417012 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
LRRTM1-205ENST00000417012 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
LRRTM1-205ENST00000417012 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
LRRTM1-205ENST00000417012 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.17
LRRTM1-205ENST00000417012 DLC1Q96QB1 1528 aa16.08■□□□□ 0.16
LRRTM1-205ENST00000417012 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.16
LRRTM1-205ENST00000417012 RIPK4P57078 832 aa16.08■□□□□ 0.16
LRRTM1-205ENST00000417012 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
LRRTM1-205ENST00000417012 POLKQ9UBT6 870 aa16.08■□□□□ 0.16
LRRTM1-205ENST00000417012 MED14O60244 1454 aa16.07■□□□□ 0.16
LRRTM1-205ENST00000417012 NME9Q86XW9 330 aa16.07■□□□□ 0.16
LRRTM1-205ENST00000417012 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
LRRTM1-205ENST00000417012 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
LRRTM1-205ENST00000417012 PPIP5K1Q6PFW1 1433 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms