RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
TTC39DP-201ENST00000416781 WWC1Q8IX03 1113 aa8.68□□□□□ -1.02
TTC39DP-201ENST00000416781 CCDC24Q8N4L8 307 aa8.67□□□□□ -1.02
TTC39DP-201ENST00000416781 PNMA1Q8ND90 353 aa8.67□□□□□ -1.02
TTC39DP-201ENST00000416781 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
TTC39DP-201ENST00000416781 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
TTC39DP-201ENST00000416781 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
TTC39DP-201ENST00000416781 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
TTC39DP-201ENST00000416781 TRAK2O60296 914 aa8.65□□□□□ -1.03
TTC39DP-201ENST00000416781 GGCXP38435 758 aa8.65□□□□□ -1.03
TTC39DP-201ENST00000416781 GPR37L1O60883 481 aa8.64□□□□□ -1.03
TTC39DP-201ENST00000416781 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
TTC39DP-201ENST00000416781 FKBPLQ9UIM3 349 aa8.64□□□□□ -1.03
TTC39DP-201ENST00000416781 PPEF1O14829 653 aaPredicted RBP8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 IRF5Q13568 498 aa8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
TTC39DP-201ENST00000416781 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
TTC39DP-201ENST00000416781 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
TTC39DP-201ENST00000416781 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
TTC39DP-201ENST00000416781 PTCRAQ6ISU1 281 aaPredicted RBP8.6□□□□□ -1.03
TTC39DP-201ENST00000416781 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
TTC39DP-201ENST00000416781 ARID3CA6NKF2 412 aa8.59□□□□□ -1.03
TTC39DP-201ENST00000416781 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
TTC39DP-201ENST00000416781 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
TTC39DP-201ENST00000416781 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
TTC39DP-201ENST00000416781 VAC14Q08AM6 782 aa8.58□□□□□ -1.04
TTC39DP-201ENST00000416781 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.04
TTC39DP-201ENST00000416781 ZNF777Q9ULD5 760 aaPredicted RBP8.58□□□□□ -1.04
TTC39DP-201ENST00000416781 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
TTC39DP-201ENST00000416781 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 FBXO45P0C2W1 286 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 PDXDC2PQ6P474 469 aa8.56□□□□□ -1.04
TTC39DP-201ENST00000416781 NR1H3Q13133 447 aa8.55□□□□□ -1.04
TTC39DP-201ENST00000416781 BAP1Q92560 729 aa8.55□□□□□ -1.04
TTC39DP-201ENST00000416781 PTK2Q05397 1052 aa8.54□□□□□ -1.04
TTC39DP-201ENST00000416781 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
TTC39DP-201ENST00000416781 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
TTC39DP-201ENST00000416781 TRIM32Q13049 653 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 AGERQ15109 404 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 SH3BP5LQ7L8J4 393 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 GLMNQ92990 594 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
TTC39DP-201ENST00000416781 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
TTC39DP-201ENST00000416781 CALR3Q96L12 384 aaKnown RBP8.52□□□□□ -1.05
TTC39DP-201ENST00000416781 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
TTC39DP-201ENST00000416781 SOX11P35716 441 aa8.51□□□□□ -1.05
TTC39DP-201ENST00000416781 BPHLQ86WA6 291 aaPredicted RBP8.51□□□□□ -1.05
TTC39DP-201ENST00000416781 CARD14Q9BXL6 1004 aa8.51□□□□□ -1.05
TTC39DP-201ENST00000416781 RPIAP49247 311 aa8.5□□□□□ -1.05
TTC39DP-201ENST00000416781 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
TTC39DP-201ENST00000416781 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
TTC39DP-201ENST00000416781 FOXJ1Q92949 421 aa8.5□□□□□ -1.05
TTC39DP-201ENST00000416781 OCSTAMPQ9BR26 566 aa8.5□□□□□ -1.05
TTC39DP-201ENST00000416781 SH3BP2P78314 561 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 SEMA3FQ13275 785 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 ARID3AQ99856 593 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 HDGFL1Q5TGJ6 251 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 ADAMTS19Q8TE59 1207 aa8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
TTC39DP-201ENST00000416781 WNT7BP56706 349 aa8.48□□□□□ -1.05
TTC39DP-201ENST00000416781 LIAT1Q6ZQX7 453 aa8.48□□□□□ -1.05
TTC39DP-201ENST00000416781 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
TTC39DP-201ENST00000416781 CD2BP2O95400 341 aaKnown RBP8.47□□□□□ -1.05
TTC39DP-201ENST00000416781 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
TTC39DP-201ENST00000416781 ALG2Q9H553 416 aa8.47□□□□□ -1.05
TTC39DP-201ENST00000416781 SLC19A1P41440 591 aa8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 SKOR1P84550 965 aa8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 TRIM26Q12899 539 aaPredicted RBP8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.05
TTC39DP-201ENST00000416781 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
TTC39DP-201ENST00000416781 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
TTC39DP-201ENST00000416781 SLC10A4Q96EP9 437 aa8.45□□□□□ -1.06
TTC39DP-201ENST00000416781 C1QTNF2Q9BXJ5 285 aa8.44□□□□□ -1.06
TTC39DP-201ENST00000416781 MCCD1P59942 119 aaPredicted RBP8.43□□□□□ -1.06
TTC39DP-201ENST00000416781 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
TTC39DP-201ENST00000416781 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
TTC39DP-201ENST00000416781 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
TTC39DP-201ENST00000416781 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
TTC39DP-201ENST00000416781 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
TTC39DP-201ENST00000416781 PRKD2Q9BZL6 878 aa8.42□□□□□ -1.06
TTC39DP-201ENST00000416781 TRMT44Q8IYL2 757 aaKnown RBP8.41□□□□□ -1.06
TTC39DP-201ENST00000416781 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
TTC39DP-201ENST00000416781 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
TTC39DP-201ENST00000416781 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
TTC39DP-201ENST00000416781 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
TTC39DP-201ENST00000416781 SLFNL1Q499Z3 407 aa8.4□□□□□ -1.07
TTC39DP-201ENST00000416781 CDV3Q9UKY7 258 aaKnown RBP8.4□□□□□ -1.07
TTC39DP-201ENST00000416781 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms