RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CCDC146Q8IYE0 955 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 VTI1AQ96AJ9 217 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 TMX1Q9H3N1 280 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 ZSWIM4Q9H7M6 989 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 JADE2Q9NQC1 790 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 GEMIN8Q9NWZ8 242 aaKnown RBP4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 TBX22Q9Y458 520 aa4.13□□□□□ -1.75
CTDSPL-203ENST00000416688 HOXA2O43364 376 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 ANP32CO43423 234 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 S100BP04271 92 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 OSBPP22059 807 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 SSFA2P28290 1259 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 APLP1P51693 650 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 PTGDRQ13258 359 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 CNGB1Q14028 1251 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 TUSC1Q2TAM9 212 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 FBXO33Q7Z6M2 555 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 ZSCAN29Q8IWY8 852 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 FAM9BQ8IZU0 186 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 ZNF710Q8N1W2 664 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 DHX38Q92620 1227 aaKnown RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 L3MBTL3Q96JM7 780 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 MTA3Q9BTC8 594 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 BACH2Q9BYV9 841 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 MAF1Q9H063 256 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 ALG2Q9H553 416 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 CCSER2Q9H7U1 834 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 CABP2Q9NPB3 220 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 SCUBE2Q9NQ36 999 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 GPHNQ9NQX3 736 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 EMILIN3Q9NT22 766 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 FAM217BQ9NTX9 383 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 BSDC1Q9NW68 430 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 COL4A3BPQ9Y5P4 624 aa4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 MAFBQ9Y5Q3 323 aaPredicted RBP4.12□□□□□ -1.75
CTDSPL-203ENST00000416688 WDHD1O75717 1129 aaPredicted RBP4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 AP1G2O75843 785 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 PAX3P23760 479 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 HDLBPQ00341 1268 aaKnown RBP4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 AAMPQ13685 434 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 C4orf46Q504U0 113 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 TMEM164Q5U3C3 297 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 PHLDB3Q6NSJ2 640 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 ILDR1Q86SU0 546 aaPredicted RBP4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 PDCD7Q8N8D1 485 aaKnown RBP4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 SCYL1Q96KG9 808 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 OCEL1Q9H607 264 aa4.11□□□□□ -1.75
CTDSPL-203ENST00000416688 EXOC5O00471 708 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 PPP1R12AO14974 1030 aaPredicted RBP4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 XPCQ01831 940 aaPredicted RBP4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 RBL2Q08999 1139 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 SEMA3FQ13275 785 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 FAM161AQ3B820 660 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 EAPPQ56P03 285 aaPredicted RBP4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 CLEC4GQ6UXB4 293 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 RIC3Q7Z5B4 369 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 PMFBP1Q8TBY8 1022 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 TMC2Q8TDI7 906 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 CCDC85AQ96PX6 553 aaPredicted RBP4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 TGIF2Q9GZN2 237 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 IRF2BPLQ9H1B7 796 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 WWC3Q9ULE0 1092 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 IQSEC3Q9UPP2 1182 aaPredicted RBP4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 CLSPNQ9HAW4 1339 aa4.1□□□□□ -1.75
CTDSPL-203ENST00000416688 PRC1O43663 620 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 ATP9BO43861 1147 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 USP17L8P0C7I0 530 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 PLCG2P16885 1265 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 SERPINB4P48594 390 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 MAP3K9P80192 1104 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 VAC14Q08AM6 782 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 FOXD4Q12950 439 aaPredicted RBP4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 TCEAL1Q15170 157 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 NFE2L2Q16236 605 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 PLEKHG6Q3KR16 790 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 C9orf131Q5VYM1 1079 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 ZNF746Q6NUN9 644 aaPredicted RBP4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 FILIP1Q7Z7B0 1213 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 NT5DC4Q86YG4 428 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 NLGN1Q8N2Q7 840 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 ASB16Q96NS5 453 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 UCN2Q96RP3 112 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 RPS6KC1Q96S38 1066 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 NAP1L4Q99733 375 aaKnown RBP4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 SENP7Q9BQF6 1050 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 TINF2Q9BSI4 451 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 OSBPL2Q9H1P3 480 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 CAPN10Q9HC96 672 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 GABBR1Q9UBS5 961 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 SWAP70Q9UH65 585 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 PNMA2Q9UL42 364 aa4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 NOVA2Q9UNW9 492 aaKnown RBP4.09□□□□□ -1.75
CTDSPL-203ENST00000416688 POTEMA6NI47 508 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 CCER2I3L3R5 266 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 DNAJC6O75061 913 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 MAPK1P28482 360 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 TBX4P57082 545 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 RHBDL3P58872 404 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 MYBPC2Q14324 1141 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms