RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 UPF1Q92900 1129 aaKnown RBP eCLIP19.32■□□□□ 0.68
AP002856.2-201ENST00000416553 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
AP002856.2-201ENST00000416553 QRICH2Q9H0J4 1663 aa19.32■□□□□ 0.68
AP002856.2-201ENST00000416553 TOPAZ1Q8N9V7 1692 aa19.31■□□□□ 0.68
AP002856.2-201ENST00000416553 ABCA3Q99758 1704 aa19.31■□□□□ 0.68
AP002856.2-201ENST00000416553 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
AP002856.2-201ENST00000416553 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
AP002856.2-201ENST00000416553 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
AP002856.2-201ENST00000416553 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
AP002856.2-201ENST00000416553 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
AP002856.2-201ENST00000416553 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
AP002856.2-201ENST00000416553 VPS72Q15906 364 aa19.25■□□□□ 0.67
AP002856.2-201ENST00000416553 RALGAPBQ86X10 1494 aa19.24■□□□□ 0.67
AP002856.2-201ENST00000416553 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
AP002856.2-201ENST00000416553 BTG4Q9NY30 223 aa19.24■□□□□ 0.67
AP002856.2-201ENST00000416553 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
AP002856.2-201ENST00000416553 NWD2Q9ULI1 1742 aa19.23■□□□□ 0.67
AP002856.2-201ENST00000416553 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
AP002856.2-201ENST00000416553 GLI3P10071 1580 aa19.22■□□□□ 0.67
AP002856.2-201ENST00000416553 PRDM11Q9NQV5 511 aa19.21■□□□□ 0.67
AP002856.2-201ENST00000416553 CCDC9Q9Y3X0 531 aaKnown RBP19.21■□□□□ 0.67
AP002856.2-201ENST00000416553 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
AP002856.2-201ENST00000416553 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 ONECUT3O60422 494 aaPredicted RBP19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
AP002856.2-201ENST00000416553 USP6P35125 1406 aa19.18■□□□□ 0.66
AP002856.2-201ENST00000416553 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
AP002856.2-201ENST00000416553 NLRP13Q86W25 1043 aa19.18■□□□□ 0.66
AP002856.2-201ENST00000416553 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 USP19O94966 1318 aa19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 EP400Q96L91 3159 aa19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 NRAPQ86VF7 1730 aa19.17■□□□□ 0.66
AP002856.2-201ENST00000416553 PHRF1Q9P1Y6 1649 aaKnown RBP19.16■□□□□ 0.66
AP002856.2-201ENST00000416553 SSH2Q76I76 1423 aa19.16■□□□□ 0.66
AP002856.2-201ENST00000416553 GCP02774 474 aa19.15■□□□□ 0.66
AP002856.2-201ENST00000416553 NLRP6P59044 892 aa19.14■□□□□ 0.65
AP002856.2-201ENST00000416553 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
AP002856.2-201ENST00000416553 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
AP002856.2-201ENST00000416553 BRWD3Q6RI45 1802 aa19.12■□□□□ 0.65
AP002856.2-201ENST00000416553 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
AP002856.2-201ENST00000416553 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
AP002856.2-201ENST00000416553 ST20-MTHFSA0A0A6YYL1 179 aa19.12■□□□□ 0.65
AP002856.2-201ENST00000416553 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
AP002856.2-201ENST00000416553 NRKQ7Z2Y5 1582 aa19.11■□□□□ 0.65
AP002856.2-201ENST00000416553 CPDO75976 1380 aa19.11■□□□□ 0.65
AP002856.2-201ENST00000416553 TESK2Q96S53 571 aa19.11■□□□□ 0.65
AP002856.2-201ENST00000416553 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
AP002856.2-201ENST00000416553 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
AP002856.2-201ENST00000416553 AKAP12Q02952 1782 aa19.1■□□□□ 0.65
AP002856.2-201ENST00000416553 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 EVA1CP58658 441 aa19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 KRT27Q7Z3Y8 459 aa19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 SLC12A5Q9H2X9 1139 aa19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
AP002856.2-201ENST00000416553 SPATA31A1Q5TZJ5 1347 aa19.08■□□□□ 0.65
AP002856.2-201ENST00000416553 A0A0G2JS52 829 aa19.08■□□□□ 0.64
AP002856.2-201ENST00000416553 MYT1Q01538 1121 aa19.08■□□□□ 0.64
AP002856.2-201ENST00000416553 CCDC125Q86Z20 511 aa19.08■□□□□ 0.64
AP002856.2-201ENST00000416553 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
AP002856.2-201ENST00000416553 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
AP002856.2-201ENST00000416553 PIK3C2AO00443 1686 aa19.07■□□□□ 0.64
AP002856.2-201ENST00000416553 SLIT3O75094 1523 aa19.05■□□□□ 0.64
AP002856.2-201ENST00000416553 CD163L1Q9NR16 1453 aa19.05■□□□□ 0.64
AP002856.2-201ENST00000416553 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
AP002856.2-201ENST00000416553 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
AP002856.2-201ENST00000416553 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
AP002856.2-201ENST00000416553 ZBTB7CA1YPR0 619 aa19.04■□□□□ 0.64
AP002856.2-201ENST00000416553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.04■□□□□ 0.64
AP002856.2-201ENST00000416553 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
AP002856.2-201ENST00000416553 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
AP002856.2-201ENST00000416553 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
AP002856.2-201ENST00000416553 ARHGEF25Q86VW2 580 aa19.02■□□□□ 0.64
AP002856.2-201ENST00000416553 KCNH5Q8NCM2 988 aa19.02■□□□□ 0.64
AP002856.2-201ENST00000416553 TERF2IPQ9NYB0 399 aa19.02■□□□□ 0.64
AP002856.2-201ENST00000416553 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
AP002856.2-201ENST00000416553 USP47Q96K76 1375 aa19.02■□□□□ 0.64
AP002856.2-201ENST00000416553 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.63
AP002856.2-201ENST00000416553 BLMP54132 1417 aaPredicted RBP19.01■□□□□ 0.63
AP002856.2-201ENST00000416553 SOX12O15370 315 aa19.01■□□□□ 0.63
AP002856.2-201ENST00000416553 BARGINQ6ZT62 677 aa19.01■□□□□ 0.63
AP002856.2-201ENST00000416553 THSD7AQ9UPZ6 1657 aa19.01■□□□□ 0.63
AP002856.2-201ENST00000416553 FAM182BQ5T319 152 aa19■□□□□ 0.63
AP002856.2-201ENST00000416553 NME9Q86XW9 330 aa19■□□□□ 0.63
AP002856.2-201ENST00000416553 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
AP002856.2-201ENST00000416553 AXIN2Q9Y2T1 843 aa19■□□□□ 0.63
AP002856.2-201ENST00000416553 COL5A2P05997 1499 aaPredicted RBP18.99■□□□□ 0.63
AP002856.2-201ENST00000416553 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
AP002856.2-201ENST00000416553 USP31Q70CQ4 1352 aa18.99■□□□□ 0.63
AP002856.2-201ENST00000416553 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
AP002856.2-201ENST00000416553 COL18A1P39060 1754 aa18.98■□□□□ 0.63
AP002856.2-201ENST00000416553 TMF1P82094 1093 aa18.98■□□□□ 0.63
AP002856.2-201ENST00000416553 EDC4Q6P2E9 1401 aaKnown RBP18.98■□□□□ 0.63
AP002856.2-201ENST00000416553 NINLQ9Y2I6 1382 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms