RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
UBXN4-203ENST00000416538 POLR3AO14802 1390 aaPredicted RBP21.86■■□□□ 1.09
UBXN4-203ENST00000416538 UNC5CLQ8IV45 518 aa21.85■■□□□ 1.09
UBXN4-203ENST00000416538 NRKQ7Z2Y5 1582 aa21.84■■□□□ 1.09
UBXN4-203ENST00000416538 EP400Q96L91 3159 aa21.84■■□□□ 1.09
UBXN4-203ENST00000416538 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.09
UBXN4-203ENST00000416538 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
UBXN4-203ENST00000416538 NGDNQ8NEJ9 315 aaKnown RBP21.83■■□□□ 1.09
UBXN4-203ENST00000416538 GJD4Q96KN9 370 aaPredicted RBP21.83■■□□□ 1.09
UBXN4-203ENST00000416538 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
UBXN4-203ENST00000416538 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
UBXN4-203ENST00000416538 ATAD2Q6PL18 1390 aa21.8■■□□□ 1.08
UBXN4-203ENST00000416538 FAM83GA6ND36 823 aa21.8■■□□□ 1.08
UBXN4-203ENST00000416538 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
UBXN4-203ENST00000416538 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
UBXN4-203ENST00000416538 ACEP12821 1306 aa21.79■■□□□ 1.08
UBXN4-203ENST00000416538 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
UBXN4-203ENST00000416538 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
UBXN4-203ENST00000416538 ROCK2O75116 1388 aaKnown RBP21.76■■□□□ 1.07
UBXN4-203ENST00000416538 PIK3C2AO00443 1686 aa21.76■■□□□ 1.07
UBXN4-203ENST00000416538 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
UBXN4-203ENST00000416538 PLEKHG3A1L390 1219 aa21.76■■□□□ 1.07
UBXN4-203ENST00000416538 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
UBXN4-203ENST00000416538 VPS72Q15906 364 aa21.76■■□□□ 1.07
UBXN4-203ENST00000416538 CABP2Q9NPB3 220 aa21.76■■□□□ 1.07
UBXN4-203ENST00000416538 THSD7AQ9UPZ6 1657 aa21.75■■□□□ 1.07
UBXN4-203ENST00000416538 SRPK2P78362 688 aaKnown RBP21.73■■□□□ 1.07
UBXN4-203ENST00000416538 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
UBXN4-203ENST00000416538 KIAA0232Q92628 1395 aa21.73■■□□□ 1.07
UBXN4-203ENST00000416538 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
UBXN4-203ENST00000416538 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
UBXN4-203ENST00000416538 USP6P35125 1406 aa21.71■■□□□ 1.07
UBXN4-203ENST00000416538 USP19O94966 1318 aa21.7■■□□□ 1.06
UBXN4-203ENST00000416538 SSH2Q76I76 1423 aa21.69■■□□□ 1.06
UBXN4-203ENST00000416538 SEPT12Q8IYM1 358 aa21.68■■□□□ 1.06
UBXN4-203ENST00000416538 SLIT3O75094 1523 aa21.68■■□□□ 1.06
UBXN4-203ENST00000416538 CAMTA1Q9Y6Y1 1673 aa21.67■■□□□ 1.06
UBXN4-203ENST00000416538 CHRNA2Q15822 529 aa21.67■■□□□ 1.06
UBXN4-203ENST00000416538 PRDM11Q9NQV5 511 aa21.67■■□□□ 1.06
UBXN4-203ENST00000416538 CCDC9Q9Y3X0 531 aaKnown RBP21.67■■□□□ 1.06
UBXN4-203ENST00000416538 ONECUT3O60422 494 aaPredicted RBP21.66■■□□□ 1.06
UBXN4-203ENST00000416538 TRIM26Q12899 539 aaPredicted RBP21.66■■□□□ 1.06
UBXN4-203ENST00000416538 CABP1Q9NZU7 370 aa21.65■■□□□ 1.06
UBXN4-203ENST00000416538 COL18A1P39060 1754 aa21.65■■□□□ 1.06
UBXN4-203ENST00000416538 TONSLQ96HA7 1378 aa21.64■■□□□ 1.06
UBXN4-203ENST00000416538 SPATA31A5Q5VU36 1347 aa21.64■■□□□ 1.05
UBXN4-203ENST00000416538 EVC2Q86UK5 1308 aa21.64■■□□□ 1.05
UBXN4-203ENST00000416538 SPATA31A7Q8IWB4 1347 aa21.64■■□□□ 1.05
UBXN4-203ENST00000416538 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.05
UBXN4-203ENST00000416538 SBNO2Q9Y2G9 1366 aa21.63■■□□□ 1.05
UBXN4-203ENST00000416538 ABTB2Q8N961 1025 aa21.63■■□□□ 1.05
UBXN4-203ENST00000416538 RGPD5Q99666 1765 aa21.63■■□□□ 1.05
UBXN4-203ENST00000416538 TNS1Q9HBL0 1735 aaKnown RBP21.63■■□□□ 1.05
UBXN4-203ENST00000416538 CPDO75976 1380 aa21.62■■□□□ 1.05
UBXN4-203ENST00000416538 FAM98CQ17RN3 349 aaKnown RBP21.62■■□□□ 1.05
UBXN4-203ENST00000416538 USP54Q70EL1 1684 aa21.62■■□□□ 1.05
UBXN4-203ENST00000416538 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
UBXN4-203ENST00000416538 BLMP54132 1417 aaPredicted RBP21.61■■□□□ 1.05
UBXN4-203ENST00000416538 BRD4O60885 1362 aaPredicted RBP21.61■■□□□ 1.05
UBXN4-203ENST00000416538 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
UBXN4-203ENST00000416538 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
UBXN4-203ENST00000416538 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
UBXN4-203ENST00000416538 COL5A2P05997 1499 aaPredicted RBP21.58■■□□□ 1.05
UBXN4-203ENST00000416538 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
UBXN4-203ENST00000416538 SPATA31A1Q5TZJ5 1347 aa21.57■■□□□ 1.04
UBXN4-203ENST00000416538 KRT27Q7Z3Y8 459 aa21.57■■□□□ 1.04
UBXN4-203ENST00000416538 NFAT5O94916 1531 aa21.56■■□□□ 1.04
UBXN4-203ENST00000416538 PARP4Q9UKK3 1724 aaKnown RBP21.56■■□□□ 1.04
UBXN4-203ENST00000416538 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
UBXN4-203ENST00000416538 A0A0G2JS52 829 aa21.55■■□□□ 1.04
UBXN4-203ENST00000416538 GCP02774 474 aa21.55■■□□□ 1.04
UBXN4-203ENST00000416538 MYT1Q01538 1121 aa21.55■■□□□ 1.04
UBXN4-203ENST00000416538 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
UBXN4-203ENST00000416538 FAM182BQ5T319 152 aa21.53■■□□□ 1.04
UBXN4-203ENST00000416538 DEFB132Q7Z7B7 95 aa21.53■■□□□ 1.04
UBXN4-203ENST00000416538 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
UBXN4-203ENST00000416538 LTN1O94822 1766 aa21.53■■□□□ 1.04
UBXN4-203ENST00000416538 TTC21BQ7Z4L5 1316 aa21.53■■□□□ 1.04
UBXN4-203ENST00000416538 LRRC37A3O60309 1634 aa21.52■■□□□ 1.04
UBXN4-203ENST00000416538 NLRP6P59044 892 aa21.52■■□□□ 1.04
UBXN4-203ENST00000416538 LARP1Q6PKG0 1096 aaKnown RBP21.52■■□□□ 1.04
UBXN4-203ENST00000416538 KTN1Q86UP2 1357 aaKnown RBP21.49■■□□□ 1.03
UBXN4-203ENST00000416538 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
UBXN4-203ENST00000416538 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
UBXN4-203ENST00000416538 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
UBXN4-203ENST00000416538 TESK2Q96S53 571 aa21.47■■□□□ 1.03
UBXN4-203ENST00000416538 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
UBXN4-203ENST00000416538 SBF2Q86WG5 1849 aa21.46■■□□□ 1.03
UBXN4-203ENST00000416538 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
UBXN4-203ENST00000416538 CRB1P82279 1406 aa21.46■■□□□ 1.03
UBXN4-203ENST00000416538 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
UBXN4-203ENST00000416538 BARGINQ6ZT62 677 aa21.45■■□□□ 1.02
UBXN4-203ENST00000416538 ZNF692Q9BU19 519 aaPredicted RBP21.45■■□□□ 1.02
UBXN4-203ENST00000416538 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
UBXN4-203ENST00000416538 ABCC6O95255 1503 aa21.45■■□□□ 1.02
UBXN4-203ENST00000416538 RREB1Q92766 1687 aa21.44■■□□□ 1.02
UBXN4-203ENST00000416538 EVA1CP58658 441 aa21.43■■□□□ 1.02
UBXN4-203ENST00000416538 SLC12A5Q9H2X9 1139 aa21.43■■□□□ 1.02
UBXN4-203ENST00000416538 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
UBXN4-203ENST00000416538 DISP2A7MBM2 1401 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms