RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 GLI3P10071 1580 aa13.92□□□□□ -0.18
LINC01946-201ENST00000416279 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
LINC01946-201ENST00000416279 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
LINC01946-201ENST00000416279 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
LINC01946-201ENST00000416279 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
LINC01946-201ENST00000416279 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
LINC01946-201ENST00000416279 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
LINC01946-201ENST00000416279 GJD4Q96KN9 370 aaPredicted RBP13.9□□□□□ -0.18
LINC01946-201ENST00000416279 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
LINC01946-201ENST00000416279 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
LINC01946-201ENST00000416279 RALGAPBQ86X10 1494 aa13.89□□□□□ -0.19
LINC01946-201ENST00000416279 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
LINC01946-201ENST00000416279 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
LINC01946-201ENST00000416279 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
LINC01946-201ENST00000416279 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
LINC01946-201ENST00000416279 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
LINC01946-201ENST00000416279 ITSN1Q15811 1721 aa13.88□□□□□ -0.19
LINC01946-201ENST00000416279 BRWD3Q6RI45 1802 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 QRICH2Q9H0J4 1663 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 ACEP12821 1306 aa13.87□□□□□ -0.19
LINC01946-201ENST00000416279 CENPJQ9HC77 1338 aaPredicted RBP13.87□□□□□ -0.19
LINC01946-201ENST00000416279 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
LINC01946-201ENST00000416279 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
LINC01946-201ENST00000416279 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
LINC01946-201ENST00000416279 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
LINC01946-201ENST00000416279 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
LINC01946-201ENST00000416279 VPS72Q15906 364 aa13.85□□□□□ -0.19
LINC01946-201ENST00000416279 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
LINC01946-201ENST00000416279 PHRF1Q9P1Y6 1649 aaKnown RBP13.83□□□□□ -0.2
LINC01946-201ENST00000416279 TONSLQ96HA7 1378 aa13.83□□□□□ -0.2
LINC01946-201ENST00000416279 COL14A1Q05707 1796 aaKnown RBP13.82□□□□□ -0.2
LINC01946-201ENST00000416279 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
LINC01946-201ENST00000416279 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
LINC01946-201ENST00000416279 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
LINC01946-201ENST00000416279 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
LINC01946-201ENST00000416279 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
LINC01946-201ENST00000416279 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
LINC01946-201ENST00000416279 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
LINC01946-201ENST00000416279 USP19O94966 1318 aa13.8□□□□□ -0.2
LINC01946-201ENST00000416279 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
LINC01946-201ENST00000416279 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
LINC01946-201ENST00000416279 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
LINC01946-201ENST00000416279 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
LINC01946-201ENST00000416279 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
LINC01946-201ENST00000416279 ATAD2Q6PL18 1390 aa13.79□□□□□ -0.2
LINC01946-201ENST00000416279 NRKQ7Z2Y5 1582 aa13.79□□□□□ -0.2
LINC01946-201ENST00000416279 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
LINC01946-201ENST00000416279 USP6P35125 1406 aa13.77□□□□□ -0.21
LINC01946-201ENST00000416279 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
LINC01946-201ENST00000416279 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
LINC01946-201ENST00000416279 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
LINC01946-201ENST00000416279 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
LINC01946-201ENST00000416279 CAMTA1Q9Y6Y1 1673 aa13.77□□□□□ -0.21
LINC01946-201ENST00000416279 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
LINC01946-201ENST00000416279 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
LINC01946-201ENST00000416279 ABTB2Q8N961 1025 aa13.75□□□□□ -0.21
LINC01946-201ENST00000416279 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
LINC01946-201ENST00000416279 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
LINC01946-201ENST00000416279 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
LINC01946-201ENST00000416279 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
LINC01946-201ENST00000416279 CPDO75976 1380 aa13.74□□□□□ -0.21
LINC01946-201ENST00000416279 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
LINC01946-201ENST00000416279 GCP02774 474 aa13.74□□□□□ -0.21
LINC01946-201ENST00000416279 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
LINC01946-201ENST00000416279 SLIT3O75094 1523 aa13.74□□□□□ -0.21
LINC01946-201ENST00000416279 COL18A1P39060 1754 aa13.73□□□□□ -0.21
LINC01946-201ENST00000416279 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
LINC01946-201ENST00000416279 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
LINC01946-201ENST00000416279 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
LINC01946-201ENST00000416279 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
LINC01946-201ENST00000416279 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
LINC01946-201ENST00000416279 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
LINC01946-201ENST00000416279 TESK2Q96S53 571 aa13.71□□□□□ -0.21
LINC01946-201ENST00000416279 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
LINC01946-201ENST00000416279 TTC21BQ7Z4L5 1316 aa13.7□□□□□ -0.22
LINC01946-201ENST00000416279 LARP1Q6PKG0 1096 aaKnown RBP13.7□□□□□ -0.22
LINC01946-201ENST00000416279 DEFB132Q7Z7B7 95 aa13.7□□□□□ -0.22
LINC01946-201ENST00000416279 NLRP13Q86W25 1043 aa13.7□□□□□ -0.22
LINC01946-201ENST00000416279 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
LINC01946-201ENST00000416279 BLMP54132 1417 aaPredicted RBP13.7□□□□□ -0.22
LINC01946-201ENST00000416279 CCDC125Q86Z20 511 aa13.69□□□□□ -0.22
LINC01946-201ENST00000416279 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
LINC01946-201ENST00000416279 MON2Q7Z3U7 1717 aa13.69□□□□□ -0.22
LINC01946-201ENST00000416279 NLRP6P59044 892 aa13.68□□□□□ -0.22
LINC01946-201ENST00000416279 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
LINC01946-201ENST00000416279 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
LINC01946-201ENST00000416279 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
LINC01946-201ENST00000416279 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
LINC01946-201ENST00000416279 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
LINC01946-201ENST00000416279 NFAT5O94916 1531 aa13.67□□□□□ -0.22
LINC01946-201ENST00000416279 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
LINC01946-201ENST00000416279 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
LINC01946-201ENST00000416279 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
LINC01946-201ENST00000416279 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
LINC01946-201ENST00000416279 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
LINC01946-201ENST00000416279 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
LINC01946-201ENST00000416279 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms