RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CNTROBQ8N137 903 aa12.87□□□□□ -0.35
COL12A1-203ENST00000416123 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
COL12A1-203ENST00000416123 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
COL12A1-203ENST00000416123 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
COL12A1-203ENST00000416123 TPM1P09493 284 aa12.86□□□□□ -0.35
COL12A1-203ENST00000416123 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
COL12A1-203ENST00000416123 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
COL12A1-203ENST00000416123 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-203ENST00000416123 PCF11O94913 1555 aaKnown RBP12.86□□□□□ -0.35
COL12A1-203ENST00000416123 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
COL12A1-203ENST00000416123 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
COL12A1-203ENST00000416123 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
COL12A1-203ENST00000416123 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
COL12A1-203ENST00000416123 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
COL12A1-203ENST00000416123 IQGAP2Q13576 1575 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 ATP2B2Q01814 1243 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-203ENST00000416123 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 BCAR3O75815 825 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 KIF14Q15058 1648 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-203ENST00000416123 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
COL12A1-203ENST00000416123 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
COL12A1-203ENST00000416123 DAPK1P53355 1430 aa12.83□□□□□ -0.35
COL12A1-203ENST00000416123 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
COL12A1-203ENST00000416123 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
COL12A1-203ENST00000416123 SAFBQ15424 915 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL12A1-203ENST00000416123 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.36
COL12A1-203ENST00000416123 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
COL12A1-203ENST00000416123 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
COL12A1-203ENST00000416123 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.36
COL12A1-203ENST00000416123 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-203ENST00000416123 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-203ENST00000416123 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
COL12A1-203ENST00000416123 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
COL12A1-203ENST00000416123 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
COL12A1-203ENST00000416123 TROQ12816 1431 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-203ENST00000416123 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
COL12A1-203ENST00000416123 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
COL12A1-203ENST00000416123 GNAI2P04899 355 aa12.81□□□□□ -0.36
COL12A1-203ENST00000416123 CUL7Q14999 1698 aa12.81□□□□□ -0.36
COL12A1-203ENST00000416123 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-203ENST00000416123 CDC45O75419 566 aa12.8□□□□□ -0.36
COL12A1-203ENST00000416123 AKNAQ7Z591 1439 aa12.8□□□□□ -0.36
COL12A1-203ENST00000416123 GSE1Q14687 1217 aa12.8□□□□□ -0.36
COL12A1-203ENST00000416123 PRDM11Q9NQV5 511 aa12.8□□□□□ -0.36
COL12A1-203ENST00000416123 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL12A1-203ENST00000416123 CEBPZQ03701 1054 aaKnown RBP12.8□□□□□ -0.36
COL12A1-203ENST00000416123 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
COL12A1-203ENST00000416123 ANKRD20A12PQ8NF67 263 aa12.79□□□□□ -0.36
COL12A1-203ENST00000416123 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
COL12A1-203ENST00000416123 GNAI3P08754 354 aa12.79□□□□□ -0.36
COL12A1-203ENST00000416123 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
COL12A1-203ENST00000416123 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
COL12A1-203ENST00000416123 EPRSP07814 1512 aaKnown RBP12.79□□□□□ -0.36
COL12A1-203ENST00000416123 STK3Q13188 491 aa12.79□□□□□ -0.36
COL12A1-203ENST00000416123 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-203ENST00000416123 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
COL12A1-203ENST00000416123 FKBP4Q02790 459 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL12A1-203ENST00000416123 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
COL12A1-203ENST00000416123 EPS15P42566 896 aa12.78□□□□□ -0.36
COL12A1-203ENST00000416123 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
COL12A1-203ENST00000416123 PSMA5P28066 241 aa12.77□□□□□ -0.36
COL12A1-203ENST00000416123 PDZRN3Q9UPQ7 1066 aa12.77□□□□□ -0.36
COL12A1-203ENST00000416123 HFM1A2PYH4 1435 aa12.77□□□□□ -0.37
COL12A1-203ENST00000416123 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
COL12A1-203ENST00000416123 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
COL12A1-203ENST00000416123 CCAR1Q8IX12 1150 aaKnown RBP12.77□□□□□ -0.37
COL12A1-203ENST00000416123 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.37
COL12A1-203ENST00000416123 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 MPHOSPH8Q99549 860 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 CAMSAP2Q08AD1 1489 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 XBP1P17861 261 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-203ENST00000416123 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
COL12A1-203ENST00000416123 SART3Q15020 963 aaKnown RBP12.76□□□□□ -0.37
COL12A1-203ENST00000416123 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
COL12A1-203ENST00000416123 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
COL12A1-203ENST00000416123 TMEM132AQ24JP5 1023 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 POGZQ7Z3K3 1410 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 PDILTQ8N807 584 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 NEK4P51957 841 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 PLB1Q6P1J6 1458 aa12.75□□□□□ -0.37
COL12A1-203ENST00000416123 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 NUCB2P80303 420 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
COL12A1-203ENST00000416123 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
COL12A1-203ENST00000416123 CCDC70Q6NSX1 233 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms