RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
RBM39-208ENST00000416108 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
RBM39-208ENST00000416108 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
RBM39-208ENST00000416108 MIER1Q8N108 512 aa11.4□□□□□ -0.58
RBM39-208ENST00000416108 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
RBM39-208ENST00000416108 SLAIN2Q9P270 581 aa11.4□□□□□ -0.58
RBM39-208ENST00000416108 NPHP3Q7Z494 1330 aa11.39□□□□□ -0.59
RBM39-208ENST00000416108 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
RBM39-208ENST00000416108 TOM1O60784 492 aa11.39□□□□□ -0.59
RBM39-208ENST00000416108 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
RBM39-208ENST00000416108 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
RBM39-208ENST00000416108 PARD3Q8TEW0 1356 aa11.39□□□□□ -0.59
RBM39-208ENST00000416108 FOXO3O43524 673 aa11.38□□□□□ -0.59
RBM39-208ENST00000416108 GGNBP2Q9H3C7 697 aa11.38□□□□□ -0.59
RBM39-208ENST00000416108 PHLPP1O60346 1717 aa11.38□□□□□ -0.59
RBM39-208ENST00000416108 MYBBP1AQ9BQG0 1328 aaKnown RBP11.37□□□□□ -0.59
RBM39-208ENST00000416108 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
RBM39-208ENST00000416108 BRINP3Q76B58 766 aa11.37□□□□□ -0.59
RBM39-208ENST00000416108 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
RBM39-208ENST00000416108 COG3Q96JB2 828 aa11.37□□□□□ -0.59
RBM39-208ENST00000416108 MARF1Q9Y4F3 1742 aaKnown RBP11.37□□□□□ -0.59
RBM39-208ENST00000416108 SSH2Q76I76 1423 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 FYB1O15117 783 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 NME9Q86XW9 330 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 CERKQ8TCT0 537 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 LTN1O94822 1766 aa11.36□□□□□ -0.59
RBM39-208ENST00000416108 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
RBM39-208ENST00000416108 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
RBM39-208ENST00000416108 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
RBM39-208ENST00000416108 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
RBM39-208ENST00000416108 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
RBM39-208ENST00000416108 PXDNQ92626 1479 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 SBNO1A3KN83 1393 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
RBM39-208ENST00000416108 PHRF1Q9P1Y6 1649 aaKnown RBP11.34□□□□□ -0.59
RBM39-208ENST00000416108 OVOS2A0A0J9YW53 1432 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 OVOS2Q6IE36 1432 aa11.34□□□□□ -0.59
RBM39-208ENST00000416108 USP31Q70CQ4 1352 aa11.33□□□□□ -0.6
RBM39-208ENST00000416108 NLRP6P59044 892 aa11.33□□□□□ -0.6
RBM39-208ENST00000416108 NLRP13Q86W25 1043 aa11.33□□□□□ -0.6
RBM39-208ENST00000416108 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
RBM39-208ENST00000416108 PPP2R1AP30153 589 aa11.32□□□□□ -0.6
RBM39-208ENST00000416108 PIP4K2BP78356 416 aa11.32□□□□□ -0.6
RBM39-208ENST00000416108 DDX17Q92841 729 aaKnown RBP11.32□□□□□ -0.6
RBM39-208ENST00000416108 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
RBM39-208ENST00000416108 NUTM2GQ5VZR2 741 aa11.31□□□□□ -0.6
RBM39-208ENST00000416108 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
RBM39-208ENST00000416108 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
RBM39-208ENST00000416108 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
RBM39-208ENST00000416108 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
RBM39-208ENST00000416108 KCNH5Q8NCM2 988 aa11.3□□□□□ -0.6
RBM39-208ENST00000416108 SOS2Q07890 1332 aaPredicted RBP11.3□□□□□ -0.6
RBM39-208ENST00000416108 SLIT3O75094 1523 aa11.3□□□□□ -0.6
RBM39-208ENST00000416108 AATKQ6ZMQ8 1374 aa11.29□□□□□ -0.6
RBM39-208ENST00000416108 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
RBM39-208ENST00000416108 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
RBM39-208ENST00000416108 SOX12O15370 315 aa11.29□□□□□ -0.6
RBM39-208ENST00000416108 SPATA31A3Q5VYP0 1347 aa11.29□□□□□ -0.6
RBM39-208ENST00000416108 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
RBM39-208ENST00000416108 HAP1P54257 671 aaPredicted RBP11.28□□□□□ -0.6
RBM39-208ENST00000416108 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
RBM39-208ENST00000416108 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.6
RBM39-208ENST00000416108 CDK12Q9NYV4 1490 aaPredicted RBP11.27□□□□□ -0.6
RBM39-208ENST00000416108 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.61
RBM39-208ENST00000416108 MTHFSP49914 203 aa11.27□□□□□ -0.61
RBM39-208ENST00000416108 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
RBM39-208ENST00000416108 SHPRHQ149N8 1683 aa11.27□□□□□ -0.61
RBM39-208ENST00000416108 NFAT5O94916 1531 aa11.26□□□□□ -0.61
RBM39-208ENST00000416108 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
RBM39-208ENST00000416108 USP19O94966 1318 aa11.26□□□□□ -0.61
RBM39-208ENST00000416108 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
RBM39-208ENST00000416108 SMG6Q86US8 1419 aaKnown RBP11.26□□□□□ -0.61
RBM39-208ENST00000416108 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
RBM39-208ENST00000416108 AMPHP49418 695 aa11.25□□□□□ -0.61
RBM39-208ENST00000416108 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
RBM39-208ENST00000416108 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 FAM9BQ8IZU0 186 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 RTL1A6NKG5 1358 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
RBM39-208ENST00000416108 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
RBM39-208ENST00000416108 EMILIN1Q9Y6C2 1016 aa11.23□□□□□ -0.61
RBM39-208ENST00000416108 FLT4P35916 1363 aa11.23□□□□□ -0.61
RBM39-208ENST00000416108 DIAPH1O60610 1272 aaKnown RBP11.22□□□□□ -0.61
RBM39-208ENST00000416108 ABCC6O95255 1503 aa11.22□□□□□ -0.61
RBM39-208ENST00000416108 GCP02774 474 aa11.22□□□□□ -0.61
RBM39-208ENST00000416108 FBLN1P23142 703 aa11.22□□□□□ -0.61
RBM39-208ENST00000416108 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
RBM39-208ENST00000416108 RGPD2P0DJD1 1756 aa11.21□□□□□ -0.61
RBM39-208ENST00000416108 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.61
RBM39-208ENST00000416108 PNPLA6Q8IY17 1366 aa11.21□□□□□ -0.61
RBM39-208ENST00000416108 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
RBM39-208ENST00000416108 COL18A1P39060 1754 aa11.21□□□□□ -0.62
RBM39-208ENST00000416108 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.62
RBM39-208ENST00000416108 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
RBM39-208ENST00000416108 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms