RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
CDC42EP1-202ENST00000415670 TRAK1Q9UPV9 953 aa24.24■■□□□ 1.47
CDC42EP1-202ENST00000415670 ALS2Q96Q42 1657 aa24.24■■□□□ 1.47
CDC42EP1-202ENST00000415670 TRIM37O94972 964 aa24.23■■□□□ 1.47
CDC42EP1-202ENST00000415670 TNS1Q9HBL0 1735 aaKnown RBP24.23■■□□□ 1.47
CDC42EP1-202ENST00000415670 CHRNA2Q15822 529 aa24.22■■□□□ 1.47
CDC42EP1-202ENST00000415670 COL14A1Q05707 1796 aaKnown RBP24.21■■□□□ 1.47
CDC42EP1-202ENST00000415670 RGPD1P0DJD0 1748 aa24.21■■□□□ 1.47
CDC42EP1-202ENST00000415670 CAMKK2Q96RR4 588 aa24.21■■□□□ 1.47
CDC42EP1-202ENST00000415670 PAK3O75914 559 aaPredicted RBP24.2■■□□□ 1.46
CDC42EP1-202ENST00000415670 THSD7AQ9UPZ6 1657 aa24.19■■□□□ 1.46
CDC42EP1-202ENST00000415670 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
CDC42EP1-202ENST00000415670 NUTM2GQ5VZR2 741 aa24.18■■□□□ 1.46
CDC42EP1-202ENST00000415670 STRN4Q9NRL3 753 aa24.17■■□□□ 1.46
CDC42EP1-202ENST00000415670 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
CDC42EP1-202ENST00000415670 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
CDC42EP1-202ENST00000415670 SPATA31A1Q5TZJ5 1347 aa24.15■■□□□ 1.46
CDC42EP1-202ENST00000415670 USP35Q9P2H5 1018 aa24.15■■□□□ 1.46
CDC42EP1-202ENST00000415670 GPRASP1Q5JY77 1395 aa24.15■■□□□ 1.46
CDC42EP1-202ENST00000415670 ADGRB1O14514 1584 aa24.14■■□□□ 1.45
CDC42EP1-202ENST00000415670 APBA3O96018 575 aa24.14■■□□□ 1.45
CDC42EP1-202ENST00000415670 ZC3H6P61129 1189 aaKnown RBP24.14■■□□□ 1.45
CDC42EP1-202ENST00000415670 KDM2AQ9Y2K7 1162 aa24.14■■□□□ 1.45
CDC42EP1-202ENST00000415670 KIAA0232Q92628 1395 aa24.14■■□□□ 1.45
CDC42EP1-202ENST00000415670 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
CDC42EP1-202ENST00000415670 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
CDC42EP1-202ENST00000415670 DLC1Q96QB1 1528 aa24.13■■□□□ 1.45
CDC42EP1-202ENST00000415670 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
CDC42EP1-202ENST00000415670 WASLO00401 505 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP1-202ENST00000415670 FAM196AQ6ZSG2 479 aa24.08■■□□□ 1.45
CDC42EP1-202ENST00000415670 TULP4Q9NRJ4 1543 aa24.08■■□□□ 1.45
CDC42EP1-202ENST00000415670 CCER1Q8TC90 406 aaPredicted RBP24.07■■□□□ 1.44
CDC42EP1-202ENST00000415670 LARP1Q6PKG0 1096 aaKnown RBP24.05■■□□□ 1.44
CDC42EP1-202ENST00000415670 NUDT16Q96DE0 195 aaKnown RBP24.05■■□□□ 1.44
CDC42EP1-202ENST00000415670 YY1P25490 414 aa24.04■■□□□ 1.44
CDC42EP1-202ENST00000415670 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
CDC42EP1-202ENST00000415670 PHRF1Q9P1Y6 1649 aaKnown RBP24.03■■□□□ 1.44
CDC42EP1-202ENST00000415670 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
CDC42EP1-202ENST00000415670 NUP188Q5SRE5 1749 aa24.03■■□□□ 1.44
CDC42EP1-202ENST00000415670 EVA1CP58658 441 aa24.01■■□□□ 1.43
CDC42EP1-202ENST00000415670 RREB1Q92766 1687 aa24.01■■□□□ 1.43
CDC42EP1-202ENST00000415670 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
CDC42EP1-202ENST00000415670 PDE3BQ13370 1112 aa23.99■■□□□ 1.43
CDC42EP1-202ENST00000415670 PTF1AQ7RTS3 328 aa23.99■■□□□ 1.43
CDC42EP1-202ENST00000415670 CDK19Q9BWU1 502 aa23.99■■□□□ 1.43
CDC42EP1-202ENST00000415670 ATP7BP35670 1465 aa23.99■■□□□ 1.43
CDC42EP1-202ENST00000415670 SSH2Q76I76 1423 aa23.98■■□□□ 1.43
CDC42EP1-202ENST00000415670 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
CDC42EP1-202ENST00000415670 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
CDC42EP1-202ENST00000415670 PDGFDQ9GZP0 370 aaPredicted RBP23.97■■□□□ 1.43
CDC42EP1-202ENST00000415670 ACEP12821 1306 aa23.96■■□□□ 1.43
CDC42EP1-202ENST00000415670 EIF3AQ14152 1382 aaKnown RBP23.94■■□□□ 1.42
CDC42EP1-202ENST00000415670 ARHGEF28Q8N1W1 1705 aaKnown RBP23.94■■□□□ 1.42
CDC42EP1-202ENST00000415670 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
CDC42EP1-202ENST00000415670 NBPF14Q5TI25 921 aa23.92■■□□□ 1.42
CDC42EP1-202ENST00000415670 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
CDC42EP1-202ENST00000415670 KCNQ2O43526 872 aa23.91■■□□□ 1.42
CDC42EP1-202ENST00000415670 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
CDC42EP1-202ENST00000415670 PARD3Q8TEW0 1356 aa23.91■■□□□ 1.42
CDC42EP1-202ENST00000415670 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 ZBTB7CA1YPR0 619 aa23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 SPON1Q9HCB6 807 aa23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 ANO8Q9HCE9 1232 aaPredicted RBP23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 PPP1R1BQ9UD71 204 aaPredicted RBP23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
CDC42EP1-202ENST00000415670 POLR3AO14802 1390 aaPredicted RBP23.89■■□□□ 1.41
CDC42EP1-202ENST00000415670 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
CDC42EP1-202ENST00000415670 PLEKHG3A1L390 1219 aa23.86■■□□□ 1.41
CDC42EP1-202ENST00000415670 GCP02774 474 aa23.86■■□□□ 1.41
CDC42EP1-202ENST00000415670 TOPAZ1Q8N9V7 1692 aa23.86■■□□□ 1.41
CDC42EP1-202ENST00000415670 PROM2Q8N271 834 aa23.85■■□□□ 1.41
CDC42EP1-202ENST00000415670 CCDC61Q9Y6R9 512 aa23.85■■□□□ 1.41
CDC42EP1-202ENST00000415670 USP19O94966 1318 aa23.84■■□□□ 1.41
CDC42EP1-202ENST00000415670 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
CDC42EP1-202ENST00000415670 CPDO75976 1380 aa23.83■■□□□ 1.41
CDC42EP1-202ENST00000415670 SBF2Q86WG5 1849 aa23.83■■□□□ 1.41
CDC42EP1-202ENST00000415670 PEAK1Q9H792 1746 aa23.83■■□□□ 1.41
CDC42EP1-202ENST00000415670 COL5A2P05997 1499 aaPredicted RBP23.82■■□□□ 1.4
CDC42EP1-202ENST00000415670 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
CDC42EP1-202ENST00000415670 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
CDC42EP1-202ENST00000415670 ZBTB7AO95365 584 aa23.81■■□□□ 1.4
CDC42EP1-202ENST00000415670 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
CDC42EP1-202ENST00000415670 UTRNP46939 3433 aa23.8■■□□□ 1.4
CDC42EP1-202ENST00000415670 ATF5Q9Y2D1 282 aaPredicted RBP23.79■■□□□ 1.4
CDC42EP1-202ENST00000415670 AXIN2Q9Y2T1 843 aa23.79■■□□□ 1.4
CDC42EP1-202ENST00000415670 THRAP3Q9Y2W1 955 aaKnown RBP23.79■■□□□ 1.4
CDC42EP1-202ENST00000415670 NLRP13Q86W25 1043 aa23.78■■□□□ 1.4
CDC42EP1-202ENST00000415670 MARCH10Q8NA82 808 aaPredicted RBP23.78■■□□□ 1.4
CDC42EP1-202ENST00000415670 CASZ1Q86V15 1759 aa23.78■■□□□ 1.4
CDC42EP1-202ENST00000415670 PLSCR1O15162 318 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 PTGER2P43116 358 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 LRRC37A3O60309 1634 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 CRB1P82279 1406 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
CDC42EP1-202ENST00000415670 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
CDC42EP1-202ENST00000415670 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
CDC42EP1-202ENST00000415670 OVOS2A0A0G2JMS6 1433 aa23.74■■□□□ 1.39
CDC42EP1-202ENST00000415670 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
CDC42EP1-202ENST00000415670 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms