RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 NBPF8Q3BBV2 869 aa15.45■□□□□ 0.06
LMCD1-203ENST00000415597 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
LMCD1-203ENST00000415597 ACEP12821 1306 aa15.44■□□□□ 0.06
LMCD1-203ENST00000415597 CENPJQ9HC77 1338 aaPredicted RBP15.44■□□□□ 0.06
LMCD1-203ENST00000415597 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
LMCD1-203ENST00000415597 NBPF1Q3BBV0 1214 aa15.44■□□□□ 0.06
LMCD1-203ENST00000415597 BAG6P46379 1132 aa15.43■□□□□ 0.06
LMCD1-203ENST00000415597 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
LMCD1-203ENST00000415597 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
LMCD1-203ENST00000415597 GLI3P10071 1580 aa15.42■□□□□ 0.06
LMCD1-203ENST00000415597 ZC3H6P61129 1189 aaKnown RBP15.42■□□□□ 0.06
LMCD1-203ENST00000415597 NUTM2GQ5VZR2 741 aa15.42■□□□□ 0.06
LMCD1-203ENST00000415597 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
LMCD1-203ENST00000415597 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
LMCD1-203ENST00000415597 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
LMCD1-203ENST00000415597 ATP7BP35670 1465 aa15.4■□□□□ 0.06
LMCD1-203ENST00000415597 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
LMCD1-203ENST00000415597 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
LMCD1-203ENST00000415597 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
LMCD1-203ENST00000415597 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
LMCD1-203ENST00000415597 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 CHRNA2Q15822 529 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 DEFB132Q7Z7B7 95 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 CABP2Q9NPB3 220 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
LMCD1-203ENST00000415597 KIAA1210Q9ULL0 1709 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 EVC2Q86UK5 1308 aa15.39■□□□□ 0.05
LMCD1-203ENST00000415597 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
LMCD1-203ENST00000415597 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
LMCD1-203ENST00000415597 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
LMCD1-203ENST00000415597 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
LMCD1-203ENST00000415597 PDE3BQ13370 1112 aa15.37■□□□□ 0.05
LMCD1-203ENST00000415597 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
LMCD1-203ENST00000415597 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
LMCD1-203ENST00000415597 CABP1Q9NZU7 370 aa15.36■□□□□ 0.05
LMCD1-203ENST00000415597 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
LMCD1-203ENST00000415597 SPATA31A1Q5TZJ5 1347 aa15.36■□□□□ 0.05
LMCD1-203ENST00000415597 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
LMCD1-203ENST00000415597 GCP02774 474 aa15.35■□□□□ 0.05
LMCD1-203ENST00000415597 NLRP6P59044 892 aa15.35■□□□□ 0.05
LMCD1-203ENST00000415597 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
LMCD1-203ENST00000415597 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
LMCD1-203ENST00000415597 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
LMCD1-203ENST00000415597 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
LMCD1-203ENST00000415597 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
LMCD1-203ENST00000415597 THRAP3Q9Y2W1 955 aaKnown RBP15.33■□□□□ 0.04
LMCD1-203ENST00000415597 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
LMCD1-203ENST00000415597 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
LMCD1-203ENST00000415597 TCP11L2Q8N4U5 519 aa15.32■□□□□ 0.04
LMCD1-203ENST00000415597 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
LMCD1-203ENST00000415597 CPDO75976 1380 aa15.31■□□□□ 0.04
LMCD1-203ENST00000415597 USP19O94966 1318 aa15.3■□□□□ 0.04
LMCD1-203ENST00000415597 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
LMCD1-203ENST00000415597 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
LMCD1-203ENST00000415597 NRAPQ86VF7 1730 aa15.29■□□□□ 0.04
LMCD1-203ENST00000415597 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
LMCD1-203ENST00000415597 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
LMCD1-203ENST00000415597 SSH2Q76I76 1423 aa15.28■□□□□ 0.04
LMCD1-203ENST00000415597 TRIM37O94972 964 aa15.28■□□□□ 0.04
LMCD1-203ENST00000415597 APBA3O96018 575 aa15.28■□□□□ 0.04
LMCD1-203ENST00000415597 USP6P35125 1406 aa15.27■□□□□ 0.04
LMCD1-203ENST00000415597 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.04
LMCD1-203ENST00000415597 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
LMCD1-203ENST00000415597 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
LMCD1-203ENST00000415597 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
LMCD1-203ENST00000415597 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
LMCD1-203ENST00000415597 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
LMCD1-203ENST00000415597 NBPF14Q5TI25 921 aa15.25■□□□□ 0.03
LMCD1-203ENST00000415597 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
LMCD1-203ENST00000415597 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
LMCD1-203ENST00000415597 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
LMCD1-203ENST00000415597 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
LMCD1-203ENST00000415597 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
LMCD1-203ENST00000415597 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
LMCD1-203ENST00000415597 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
LMCD1-203ENST00000415597 EZH2Q15910 746 aaKnown RBP15.23■□□□□ 0.03
LMCD1-203ENST00000415597 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
LMCD1-203ENST00000415597 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
LMCD1-203ENST00000415597 CDCA7Q9BWT1 371 aaPredicted RBP15.23■□□□□ 0.03
LMCD1-203ENST00000415597 CRB1P82279 1406 aa15.23■□□□□ 0.03
LMCD1-203ENST00000415597 PARD3Q8TEW0 1356 aa15.23■□□□□ 0.03
LMCD1-203ENST00000415597 CAMTA1Q9Y6Y1 1673 aa15.22■□□□□ 0.03
LMCD1-203ENST00000415597 SOX12O15370 315 aa15.22■□□□□ 0.03
LMCD1-203ENST00000415597 DDB1Q16531 1140 aa15.22■□□□□ 0.03
LMCD1-203ENST00000415597 EP400Q96L91 3159 aa15.22■□□□□ 0.03
LMCD1-203ENST00000415597 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
LMCD1-203ENST00000415597 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.03
LMCD1-203ENST00000415597 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
LMCD1-203ENST00000415597 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
LMCD1-203ENST00000415597 THSD7AQ9UPZ6 1657 aa15.21■□□□□ 0.03
LMCD1-203ENST00000415597 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
LMCD1-203ENST00000415597 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
LMCD1-203ENST00000415597 TERF2IPQ9NYB0 399 aa15.2■□□□□ 0.02
LMCD1-203ENST00000415597 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
LMCD1-203ENST00000415597 TRPM1Q7Z4N2 1603 aa15.19■□□□□ 0.02
LMCD1-203ENST00000415597 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
LMCD1-203ENST00000415597 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
LMCD1-203ENST00000415597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
LMCD1-203ENST00000415597 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
LMCD1-203ENST00000415597 EXOC5O00471 708 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms