RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 ATF7IPQ6VMQ6 1270 aa22.83■■□□□ 1.24
SCARB1-203ENST00000415380 STK26Q9P289 416 aa22.83■■□□□ 1.24
SCARB1-203ENST00000415380 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
SCARB1-203ENST00000415380 NOB1Q9ULX3 412 aaKnown RBP22.81■■□□□ 1.24
SCARB1-203ENST00000415380 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
SCARB1-203ENST00000415380 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
SCARB1-203ENST00000415380 IL16Q14005 1332 aa22.8■■□□□ 1.24
SCARB1-203ENST00000415380 MFAP1P55081 439 aaKnown RBP22.8■■□□□ 1.24
SCARB1-203ENST00000415380 IDI1Q13907 227 aa22.8■■□□□ 1.24
SCARB1-203ENST00000415380 FYB1O15117 783 aa22.79■■□□□ 1.24
SCARB1-203ENST00000415380 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
SCARB1-203ENST00000415380 RIPK4P57078 832 aa22.78■■□□□ 1.24
SCARB1-203ENST00000415380 SMC5Q8IY18 1101 aa22.78■■□□□ 1.24
SCARB1-203ENST00000415380 TMEM57Q8N5G2 664 aa22.78■■□□□ 1.24
SCARB1-203ENST00000415380 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.78■■□□□ 1.24
SCARB1-203ENST00000415380 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
SCARB1-203ENST00000415380 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
SCARB1-203ENST00000415380 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 MED14O60244 1454 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 CD163L1Q9NR16 1453 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 PTPRMP28827 1452 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 RAPGEF3O95398 923 aa22.76■■□□□ 1.23
SCARB1-203ENST00000415380 MINK1Q8N4C8 1332 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-203ENST00000415380 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
SCARB1-203ENST00000415380 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
SCARB1-203ENST00000415380 FAM43AQ8N2R8 423 aa22.75■■□□□ 1.23
SCARB1-203ENST00000415380 DIAPH1O60610 1272 aaKnown RBP22.74■■□□□ 1.23
SCARB1-203ENST00000415380 KIF16BQ96L93 1317 aa22.73■■□□□ 1.23
SCARB1-203ENST00000415380 PRAM1Q96QH2 718 aa22.73■■□□□ 1.23
SCARB1-203ENST00000415380 DIP2CQ9Y2E4 1556 aa22.73■■□□□ 1.23
SCARB1-203ENST00000415380 L1TD1Q5T7N2 865 aaKnown RBP22.72■■□□□ 1.23
SCARB1-203ENST00000415380 IPO8O15397 1037 aaKnown RBP22.72■■□□□ 1.23
SCARB1-203ENST00000415380 PNPLA6Q8IY17 1366 aa22.71■■□□□ 1.23
SCARB1-203ENST00000415380 CLTCQ00610 1675 aaKnown RBP22.71■■□□□ 1.23
SCARB1-203ENST00000415380 MCM4P33991 863 aa22.71■■□□□ 1.23
SCARB1-203ENST00000415380 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
SCARB1-203ENST00000415380 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
SCARB1-203ENST00000415380 CHMP5Q9NZZ3 219 aa22.7■■□□□ 1.22
SCARB1-203ENST00000415380 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
SCARB1-203ENST00000415380 YTHDC2Q9H6S0 1430 aaKnown RBP22.69■■□□□ 1.22
SCARB1-203ENST00000415380 NUCB1Q02818 461 aa22.69■■□□□ 1.22
SCARB1-203ENST00000415380 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
SCARB1-203ENST00000415380 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
SCARB1-203ENST00000415380 NEO1Q92859 1461 aa22.67■■□□□ 1.22
SCARB1-203ENST00000415380 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
SCARB1-203ENST00000415380 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
SCARB1-203ENST00000415380 FCHSD2O94868 740 aa22.66■■□□□ 1.22
SCARB1-203ENST00000415380 HSCBQ8IWL3 235 aa22.66■■□□□ 1.22
SCARB1-203ENST00000415380 LNPKQ9C0E8 428 aa22.66■■□□□ 1.22
SCARB1-203ENST00000415380 CDK19Q9BWU1 502 aa22.65■■□□□ 1.22
SCARB1-203ENST00000415380 CDC42BPGQ6DT37 1551 aa22.65■■□□□ 1.22
SCARB1-203ENST00000415380 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
SCARB1-203ENST00000415380 KIF20BQ96Q89 1820 aa22.64■■□□□ 1.21
SCARB1-203ENST00000415380 CHD1LQ86WJ1 897 aa22.64■■□□□ 1.21
SCARB1-203ENST00000415380 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.21
SCARB1-203ENST00000415380 PRKAR2BP31323 418 aa22.63■■□□□ 1.21
SCARB1-203ENST00000415380 RBM25P49756 843 aaKnown RBP22.63■■□□□ 1.21
SCARB1-203ENST00000415380 FAM135BQ49AJ0 1406 aa22.63■■□□□ 1.21
SCARB1-203ENST00000415380 PREX1Q8TCU6 1659 aa22.63■■□□□ 1.21
SCARB1-203ENST00000415380 ZNF692Q9BU19 519 aaPredicted RBP22.63■■□□□ 1.21
SCARB1-203ENST00000415380 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
SCARB1-203ENST00000415380 FSD2A1L4K1 749 aa22.62■■□□□ 1.21
SCARB1-203ENST00000415380 GOLGA6L3A6NEY3 463 aa22.62■■□□□ 1.21
SCARB1-203ENST00000415380 GZF1Q9H116 711 aaPredicted RBP22.62■■□□□ 1.21
SCARB1-203ENST00000415380 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-203ENST00000415380 ARXQ96QS3 562 aa22.61■■□□□ 1.21
SCARB1-203ENST00000415380 FBLN1P23142 703 aa22.61■■□□□ 1.21
SCARB1-203ENST00000415380 NCOA3Q9Y6Q9 1424 aa22.61■■□□□ 1.21
SCARB1-203ENST00000415380 TRAK2O60296 914 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 XRCC6P12956 609 aaKnown RBP eCLIP22.6■■□□□ 1.21
SCARB1-203ENST00000415380 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 POLKQ9UBT6 870 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 YEATS2Q9ULM3 1422 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
SCARB1-203ENST00000415380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.59■■□□□ 1.212e-8■□□□□ 8.6
SCARB1-203ENST00000415380 ZBTB7BO15156 539 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-203ENST00000415380 SNX21Q969T3 373 aa22.59■■□□□ 1.21
SCARB1-203ENST00000415380 RICTORQ6R327 1708 aa22.58■■□□□ 1.21
SCARB1-203ENST00000415380 DDIT3P35638 169 aa22.58■■□□□ 1.21
SCARB1-203ENST00000415380 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
SCARB1-203ENST00000415380 BMP2KLQ5H9B9 411 aa22.58■■□□□ 1.2
SCARB1-203ENST00000415380 MRPL50Q8N5N7 158 aaKnown RBP22.58■■□□□ 1.2
SCARB1-203ENST00000415380 RRAGDQ9NQL2 400 aaPredicted RBP22.58■■□□□ 1.2
SCARB1-203ENST00000415380 VAMP4O75379 141 aa22.57■■□□□ 1.2
SCARB1-203ENST00000415380 NFE2L2Q16236 605 aa22.57■■□□□ 1.2
SCARB1-203ENST00000415380 THUMPD2Q9BTF0 503 aaKnown RBP22.57■■□□□ 1.2
SCARB1-203ENST00000415380 ANKRD45Q5TZF3 282 aa22.56■■□□□ 1.2
SCARB1-203ENST00000415380 HMOX1P09601 288 aa22.56■■□□□ 1.2
SCARB1-203ENST00000415380 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
SCARB1-203ENST00000415380 FBXO31Q5XUX0 539 aaPredicted RBP22.55■■□□□ 1.2
SCARB1-203ENST00000415380 GCC1Q96CN9 775 aa22.55■■□□□ 1.2
SCARB1-203ENST00000415380 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
SCARB1-203ENST00000415380 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
SCARB1-203ENST00000415380 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
SCARB1-203ENST00000415380 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
SCARB1-203ENST00000415380 DDX11L8A8MPP1 907 aa22.54■■□□□ 1.2
SCARB1-203ENST00000415380 PANK2Q9BZ23 570 aa22.53■■□□□ 1.2
SCARB1-203ENST00000415380 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms