RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KIF20BQ96Q89 1820 aa21.07■□□□□ 0.96
SHMT2-202ENST00000414700 RALBP1Q15311 655 aa21.07■□□□□ 0.96
SHMT2-202ENST00000414700 NME9Q86XW9 330 aa21.05■□□□□ 0.96
SHMT2-202ENST00000414700 SSH2Q76I76 1423 aa21.05■□□□□ 0.96
SHMT2-202ENST00000414700 FOXO3O43524 673 aa21.04■□□□□ 0.96
SHMT2-202ENST00000414700 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
SHMT2-202ENST00000414700 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
SHMT2-202ENST00000414700 TTC21BQ7Z4L5 1316 aa21.04■□□□□ 0.96
SHMT2-202ENST00000414700 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
SHMT2-202ENST00000414700 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
SHMT2-202ENST00000414700 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
SHMT2-202ENST00000414700 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
SHMT2-202ENST00000414700 DDX17Q92841 729 aaKnown RBP21.02■□□□□ 0.96
SHMT2-202ENST00000414700 NSD2O96028 1365 aa21.01■□□□□ 0.95
SHMT2-202ENST00000414700 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
SHMT2-202ENST00000414700 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
SHMT2-202ENST00000414700 SLAIN2Q9P270 581 aa21.01■□□□□ 0.95
SHMT2-202ENST00000414700 KIF1AQ12756 1690 aa21.01■□□□□ 0.95
SHMT2-202ENST00000414700 SUPT16HQ9Y5B9 1047 aaKnown RBP21■□□□□ 0.95
SHMT2-202ENST00000414700 PPP2R1AP30153 589 aa21■□□□□ 0.95
SHMT2-202ENST00000414700 PSME1Q06323 249 aa20.99■□□□□ 0.95
SHMT2-202ENST00000414700 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
SHMT2-202ENST00000414700 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
SHMT2-202ENST00000414700 MRS2Q9HD23 443 aa20.98■□□□□ 0.95
SHMT2-202ENST00000414700 PAK3O75914 559 aaPredicted RBP20.97■□□□□ 0.95
SHMT2-202ENST00000414700 FBLN1P23142 703 aa20.97■□□□□ 0.95
SHMT2-202ENST00000414700 NLRP13Q86W25 1043 aa20.97■□□□□ 0.95
SHMT2-202ENST00000414700 TTC21AQ8NDW8 1320 aa20.95■□□□□ 0.94
SHMT2-202ENST00000414700 NUTM2GQ5VZR2 741 aa20.95■□□□□ 0.94
SHMT2-202ENST00000414700 TRPM3Q9HCF6 1732 aaPredicted RBP20.95■□□□□ 0.94
SHMT2-202ENST00000414700 KRT28Q7Z3Y7 464 aa20.94■□□□□ 0.94
SHMT2-202ENST00000414700 OVOS2A0A0J9YW53 1432 aa20.93■□□□□ 0.94
SHMT2-202ENST00000414700 OVOS2Q6IE36 1432 aa20.93■□□□□ 0.94
SHMT2-202ENST00000414700 MARF1Q9Y4F3 1742 aaKnown RBP20.93■□□□□ 0.94
SHMT2-202ENST00000414700 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
SHMT2-202ENST00000414700 COG3Q96JB2 828 aa20.93■□□□□ 0.94
SHMT2-202ENST00000414700 ABTB2Q8N961 1025 aa20.92■□□□□ 0.94
SHMT2-202ENST00000414700 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
SHMT2-202ENST00000414700 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
SHMT2-202ENST00000414700 TSHZ2Q9NRE2 1034 aa20.91■□□□□ 0.94
SHMT2-202ENST00000414700 NPHP3Q7Z494 1330 aa20.9■□□□□ 0.94
SHMT2-202ENST00000414700 PXDNQ92626 1479 aa20.9■□□□□ 0.94
SHMT2-202ENST00000414700 NLRP6P59044 892 aa20.9■□□□□ 0.94
SHMT2-202ENST00000414700 MTHFSP49914 203 aa20.89■□□□□ 0.93
SHMT2-202ENST00000414700 SOX12O15370 315 aa20.88■□□□□ 0.93
SHMT2-202ENST00000414700 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
SHMT2-202ENST00000414700 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
SHMT2-202ENST00000414700 LMOD2Q6P5Q4 547 aa20.87■□□□□ 0.93
SHMT2-202ENST00000414700 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
SHMT2-202ENST00000414700 ALS2Q96Q42 1657 aa20.87■□□□□ 0.93
SHMT2-202ENST00000414700 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
SHMT2-202ENST00000414700 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
SHMT2-202ENST00000414700 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
SHMT2-202ENST00000414700 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
SHMT2-202ENST00000414700 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
SHMT2-202ENST00000414700 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
SHMT2-202ENST00000414700 EMILIN1Q9Y6C2 1016 aa20.85■□□□□ 0.93
SHMT2-202ENST00000414700 SOS2Q07890 1332 aaPredicted RBP20.83■□□□□ 0.93
SHMT2-202ENST00000414700 AATKQ6ZMQ8 1374 aa20.83■□□□□ 0.92
SHMT2-202ENST00000414700 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
SHMT2-202ENST00000414700 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
SHMT2-202ENST00000414700 TNS3Q68CZ2 1445 aa20.82■□□□□ 0.92
SHMT2-202ENST00000414700 PIP4K2BP78356 416 aa20.81■□□□□ 0.92
SHMT2-202ENST00000414700 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
SHMT2-202ENST00000414700 SPATA31A3Q5VYP0 1347 aa20.81■□□□□ 0.92
SHMT2-202ENST00000414700 TOM1O60784 492 aa20.8■□□□□ 0.92
SHMT2-202ENST00000414700 SHPRHQ149N8 1683 aa20.79■□□□□ 0.92
SHMT2-202ENST00000414700 UBAP1LF5GYI3 381 aa20.79■□□□□ 0.92
SHMT2-202ENST00000414700 PEAK1Q9H792 1746 aa20.79■□□□□ 0.92
SHMT2-202ENST00000414700 MED1Q15648 1581 aaPredicted RBP20.79■□□□□ 0.92
SHMT2-202ENST00000414700 SMG6Q86US8 1419 aaKnown RBP20.78■□□□□ 0.92
SHMT2-202ENST00000414700 COL3A1P02461 1466 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-202ENST00000414700 NFAT5O94916 1531 aa20.77■□□□□ 0.92
SHMT2-202ENST00000414700 MAP3K19Q56UN5 1328 aa20.77■□□□□ 0.92
SHMT2-202ENST00000414700 PNPLA6Q8IY17 1366 aa20.77■□□□□ 0.92
SHMT2-202ENST00000414700 CABLES1Q8TDN4 633 aa20.77■□□□□ 0.91
SHMT2-202ENST00000414700 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
SHMT2-202ENST00000414700 USP19O94966 1318 aa20.76■□□□□ 0.91
SHMT2-202ENST00000414700 SLIT3O75094 1523 aa20.76■□□□□ 0.91
SHMT2-202ENST00000414700 LTN1O94822 1766 aa20.76■□□□□ 0.91
SHMT2-202ENST00000414700 AHDC1Q5TGY3 1603 aaPredicted RBP20.75■□□□□ 0.91
SHMT2-202ENST00000414700 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
SHMT2-202ENST00000414700 GCP02774 474 aa20.75■□□□□ 0.91
SHMT2-202ENST00000414700 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
SHMT2-202ENST00000414700 CDK12Q9NYV4 1490 aaPredicted RBP20.74■□□□□ 0.91
SHMT2-202ENST00000414700 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
SHMT2-202ENST00000414700 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
SHMT2-202ENST00000414700 PHRF1Q9P1Y6 1649 aaKnown RBP20.73■□□□□ 0.91
SHMT2-202ENST00000414700 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
SHMT2-202ENST00000414700 HSP90AB2PQ58FF8 381 aa20.72■□□□□ 0.91
SHMT2-202ENST00000414700 WDR43Q15061 677 aaKnown RBP eCLIP20.71■□□□□ 0.91
SHMT2-202ENST00000414700 PHLPP1O60346 1717 aa20.71■□□□□ 0.91
SHMT2-202ENST00000414700 INSRP06213 1382 aa20.71■□□□□ 0.91
SHMT2-202ENST00000414700 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
SHMT2-202ENST00000414700 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
SHMT2-202ENST00000414700 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
SHMT2-202ENST00000414700 DIAPH1O60610 1272 aaKnown RBP20.69■□□□□ 0.9
SHMT2-202ENST00000414700 AMPHP49418 695 aa20.69■□□□□ 0.9
SHMT2-202ENST00000414700 ZC3H6P61129 1189 aaKnown RBP20.69■□□□□ 0.9
SHMT2-202ENST00000414700 FLT4P35916 1363 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms