RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 LAPTM4BQ86VI4 370 aa10.36□□□□□ -0.75
LINC00343-201ENST00000414368 A2MP01023 1474 aa10.36□□□□□ -0.75
LINC00343-201ENST00000414368 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
LINC00343-201ENST00000414368 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
LINC00343-201ENST00000414368 ZDHHC16Q969W1 377 aa10.35□□□□□ -0.75
LINC00343-201ENST00000414368 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
LINC00343-201ENST00000414368 EVI5O60447 810 aa10.34□□□□□ -0.75
LINC00343-201ENST00000414368 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
LINC00343-201ENST00000414368 DHX29Q7Z478 1369 aaKnown RBP10.34□□□□□ -0.75
LINC00343-201ENST00000414368 PLXNC1O60486 1568 aa10.34□□□□□ -0.75
LINC00343-201ENST00000414368 REREQ9P2R6 1566 aa10.34□□□□□ -0.75
LINC00343-201ENST00000414368 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
LINC00343-201ENST00000414368 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
LINC00343-201ENST00000414368 KIF3BO15066 747 aa10.33□□□□□ -0.76
LINC00343-201ENST00000414368 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
LINC00343-201ENST00000414368 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
LINC00343-201ENST00000414368 ANKRD30AQ9BXX3 1397 aa10.33□□□□□ -0.76
LINC00343-201ENST00000414368 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
LINC00343-201ENST00000414368 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
LINC00343-201ENST00000414368 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
LINC00343-201ENST00000414368 AGLP35573 1532 aa10.32□□□□□ -0.76
LINC00343-201ENST00000414368 LOC100996750A0A140TA64 210 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 PROX2Q3B8N5 592 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 GGT6Q6P531 493 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 TREML4Q6UXN2 200 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 KRTAP4-6Q9BYQ5 205 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 DUOX2Q9NRD8 1548 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
LINC00343-201ENST00000414368 DDX12PQ92771 950 aa10.3□□□□□ -0.76
LINC00343-201ENST00000414368 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
LINC00343-201ENST00000414368 ROCK1Q13464 1354 aa10.29□□□□□ -0.76
LINC00343-201ENST00000414368 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
LINC00343-201ENST00000414368 FER1L4A9Z1Z3 1794 aa10.29□□□□□ -0.76
LINC00343-201ENST00000414368 TSR3Q9UJK0 312 aaKnown RBP10.28□□□□□ -0.76
LINC00343-201ENST00000414368 RIMS1Q86UR5 1692 aaKnown RBP10.28□□□□□ -0.76
LINC00343-201ENST00000414368 ANKRD50Q9ULJ7 1429 aa10.27□□□□□ -0.77
LINC00343-201ENST00000414368 ANO8Q9HCE9 1232 aaPredicted RBP10.27□□□□□ -0.77
LINC00343-201ENST00000414368 EIF2AK4Q9P2K8 1649 aaKnown RBP10.26□□□□□ -0.77
LINC00343-201ENST00000414368 ERBINQ96RT1 1412 aa10.26□□□□□ -0.77
LINC00343-201ENST00000414368 PPP1R18Q6NYC8 613 aa10.26□□□□□ -0.77
LINC00343-201ENST00000414368 NAIPQ13075 1403 aa10.25□□□□□ -0.77
LINC00343-201ENST00000414368 CLTCQ00610 1675 aaKnown RBP10.25□□□□□ -0.77
LINC00343-201ENST00000414368 NUTM2FA1L443 756 aa10.25□□□□□ -0.77
LINC00343-201ENST00000414368 POTECB2RU33 542 aa10.25□□□□□ -0.77
LINC00343-201ENST00000414368 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
LINC00343-201ENST00000414368 ESF1Q9H501 851 aaKnown RBP10.25□□□□□ -0.77
LINC00343-201ENST00000414368 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
LINC00343-201ENST00000414368 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
LINC00343-201ENST00000414368 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
LINC00343-201ENST00000414368 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
LINC00343-201ENST00000414368 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
LINC00343-201ENST00000414368 KIAA1468Q9P260 1216 aa10.24□□□□□ -0.77
LINC00343-201ENST00000414368 WASHC2CQ9Y4E1 1318 aa10.24□□□□□ -0.77
LINC00343-201ENST00000414368 GCC2Q8IWJ2 1684 aa10.24□□□□□ -0.77
LINC00343-201ENST00000414368 PTPRMP28827 1452 aa10.23□□□□□ -0.77
LINC00343-201ENST00000414368 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
LINC00343-201ENST00000414368 STK17AQ9UEE5 414 aa10.23□□□□□ -0.77
LINC00343-201ENST00000414368 CEP152O94986 1710 aa10.23□□□□□ -0.77
LINC00343-201ENST00000414368 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
LINC00343-201ENST00000414368 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
LINC00343-201ENST00000414368 ZMYND10O75800 440 aa10.22□□□□□ -0.77
LINC00343-201ENST00000414368 OSBPP22059 807 aa10.22□□□□□ -0.77
LINC00343-201ENST00000414368 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
LINC00343-201ENST00000414368 ZMYM3Q14202 1370 aa10.22□□□□□ -0.77
LINC00343-201ENST00000414368 C3P01024 1663 aa10.22□□□□□ -0.77
LINC00343-201ENST00000414368 COL9A1P20849 921 aa10.21□□□□□ -0.77
LINC00343-201ENST00000414368 TRIM26Q12899 539 aaPredicted RBP10.21□□□□□ -0.77
LINC00343-201ENST00000414368 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
LINC00343-201ENST00000414368 ABCC3O15438 1527 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 PRDM15P57071 1507 aaPredicted RBP10.2□□□□□ -0.78
LINC00343-201ENST00000414368 BARGINQ6ZT62 677 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 EPAS1Q99814 870 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 KDM5DQ9BY66 1539 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 SLC24A3Q9HC58 644 aa10.2□□□□□ -0.78
LINC00343-201ENST00000414368 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
LINC00343-201ENST00000414368 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
LINC00343-201ENST00000414368 MROH2AA6NES4 1674 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 UNC13BO14795 1591 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 CNTLNQ9NXG0 1405 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 NUP155O75694 1391 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 KANK1Q14678 1352 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 PHF14O94880 888 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
LINC00343-201ENST00000414368 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
LINC00343-201ENST00000414368 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
LINC00343-201ENST00000414368 MYT1Q01538 1121 aa10.18□□□□□ -0.78
LINC00343-201ENST00000414368 PKDCCQ504Y2 493 aa10.18□□□□□ -0.78
LINC00343-201ENST00000414368 CAMSAP1Q5T5Y3 1602 aa10.18□□□□□ -0.78
LINC00343-201ENST00000414368 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
LINC00343-201ENST00000414368 ZC3H13Q5T200 1668 aaKnown RBP10.17□□□□□ -0.78
LINC00343-201ENST00000414368 SETD1BQ9UPS6 1966 aaKnown RBP10.16□□□□□ -0.78
LINC00343-201ENST00000414368 IQGAP3Q86VI3 1631 aa10.16□□□□□ -0.78
LINC00343-201ENST00000414368 MAP3K7O43318 606 aa10.16□□□□□ -0.78
LINC00343-201ENST00000414368 FCHSD2O94868 740 aa10.16□□□□□ -0.78
LINC00343-201ENST00000414368 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
LINC00343-201ENST00000414368 RBM33Q96EV2 1170 aaKnown RBP10.16□□□□□ -0.78
LINC00343-201ENST00000414368 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
LINC00343-201ENST00000414368 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms