RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
SIK3-202ENST00000413553 MRE11P49959 708 aa11.27□□□□□ -0.6
SIK3-202ENST00000413553 RARSP54136 660 aaKnown RBP11.27□□□□□ -0.6
SIK3-202ENST00000413553 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.6
SIK3-202ENST00000413553 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
SIK3-202ENST00000413553 PPLO60437 1756 aa11.27□□□□□ -0.61
SIK3-202ENST00000413553 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SIK3-202ENST00000413553 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
SIK3-202ENST00000413553 GRPEL1Q9HAV7 217 aa11.26□□□□□ -0.61
SIK3-202ENST00000413553 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
SIK3-202ENST00000413553 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
SIK3-202ENST00000413553 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 AAMPQ13685 434 aa11.25□□□□□ -0.61
SIK3-202ENST00000413553 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
SIK3-202ENST00000413553 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
SIK3-202ENST00000413553 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
SIK3-202ENST00000413553 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
SIK3-202ENST00000413553 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
SIK3-202ENST00000413553 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
SIK3-202ENST00000413553 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
SIK3-202ENST00000413553 ESPNB1AK53 854 aa11.23□□□□□ -0.61
SIK3-202ENST00000413553 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
SIK3-202ENST00000413553 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
SIK3-202ENST00000413553 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
SIK3-202ENST00000413553 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
SIK3-202ENST00000413553 ZMYND15Q9H091 742 aa11.22□□□□□ -0.61
SIK3-202ENST00000413553 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
SIK3-202ENST00000413553 MVPQ14764 893 aaKnown RBP11.21□□□□□ -0.61
SIK3-202ENST00000413553 MORC1Q86VD1 984 aa11.21□□□□□ -0.61
SIK3-202ENST00000413553 POLR3AO14802 1390 aaPredicted RBP11.21□□□□□ -0.61
SIK3-202ENST00000413553 ERBB4Q15303 1308 aa11.21□□□□□ -0.62
SIK3-202ENST00000413553 TXNDC2Q86VQ3 553 aa11.21□□□□□ -0.62
SIK3-202ENST00000413553 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
SIK3-202ENST00000413553 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
SIK3-202ENST00000413553 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
SIK3-202ENST00000413553 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
SIK3-202ENST00000413553 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
SIK3-202ENST00000413553 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
SIK3-202ENST00000413553 MINK1Q8N4C8 1332 aaPredicted RBP11.19□□□□□ -0.62
SIK3-202ENST00000413553 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
SIK3-202ENST00000413553 THEMISQ8N1K5 641 aaPredicted RBP11.19□□□□□ -0.62
SIK3-202ENST00000413553 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
SIK3-202ENST00000413553 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
SIK3-202ENST00000413553 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
SIK3-202ENST00000413553 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
SIK3-202ENST00000413553 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
SIK3-202ENST00000413553 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
SIK3-202ENST00000413553 ITPRIPQ8IWB1 547 aa11.18□□□□□ -0.62
SIK3-202ENST00000413553 GBP4Q96PP9 640 aa11.18□□□□□ -0.62
SIK3-202ENST00000413553 TNPO1Q92973 898 aaKnown RBP11.17□□□□□ -0.62
SIK3-202ENST00000413553 NSD3Q9BZ95 1437 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
SIK3-202ENST00000413553 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
SIK3-202ENST00000413553 SMC4Q9NTJ3 1288 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 IQSEC2Q5JU85 1478 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 SLC26A8Q96RN1 970 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
SIK3-202ENST00000413553 LTKP29376 864 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 WAPLQ7Z5K2 1190 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 GAS2L3Q86XJ1 694 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 TSR2Q969E8 191 aaKnown RBP11.16□□□□□ -0.62
SIK3-202ENST00000413553 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
SIK3-202ENST00000413553 C3P01024 1663 aa11.15□□□□□ -0.62
SIK3-202ENST00000413553 CFAP53Q96M91 514 aa11.15□□□□□ -0.62
SIK3-202ENST00000413553 MTHFSP49914 203 aa11.15□□□□□ -0.63
SIK3-202ENST00000413553 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
SIK3-202ENST00000413553 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
SIK3-202ENST00000413553 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
SIK3-202ENST00000413553 TRIM27P14373 513 aa11.14□□□□□ -0.63
SIK3-202ENST00000413553 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
SIK3-202ENST00000413553 NCOA3Q9Y6Q9 1424 aa11.14□□□□□ -0.63
SIK3-202ENST00000413553 TPM2P07951 284 aa11.13□□□□□ -0.63
SIK3-202ENST00000413553 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
SIK3-202ENST00000413553 ANP32BQ92688 251 aaKnown RBP11.13□□□□□ -0.63
SIK3-202ENST00000413553 LNPKQ9C0E8 428 aa11.13□□□□□ -0.63
SIK3-202ENST00000413553 HDAC1Q13547 482 aaPredicted RBP11.13□□□□□ -0.63
SIK3-202ENST00000413553 METP08581 1390 aa11.13□□□□□ -0.63
SIK3-202ENST00000413553 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
SIK3-202ENST00000413553 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
SIK3-202ENST00000413553 KIAA1211Q6ZU35 1233 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 DDIT3P35638 169 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 RBM25P49756 843 aaKnown RBP11.12□□□□□ -0.63
SIK3-202ENST00000413553 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
SIK3-202ENST00000413553 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
SIK3-202ENST00000413553 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 RAB3GAP1Q15042 981 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 SNX21Q969T3 373 aa11.12□□□□□ -0.63
SIK3-202ENST00000413553 GOLGA6L22H0YM25 854 aa11.11□□□□□ -0.63
SIK3-202ENST00000413553 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
SIK3-202ENST00000413553 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms