RNA–Protein interactions for RNA: ENST00000413468.1

RGPD5-204, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 2,179 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-204ENST00000413468 NCKAP5LQ9HCH0 1330 aa6.47□□□□□ -1.37
RGPD5-204ENST00000413468 U2AF1L5P0DN76 240 aaPredicted RBP6.47□□□□□ -1.37
RGPD5-204ENST00000413468 U2AF1Q01081 240 aaKnown RBP eCLIP6.47□□□□□ -1.37
RGPD5-204ENST00000413468 IQSEC2Q5JU85 1478 aa6.47□□□□□ -1.37
RGPD5-204ENST00000413468 A0A1W2PP64 1363 aa6.46□□□□□ -1.37
RGPD5-204ENST00000413468 NINLQ9Y2I6 1382 aa6.46□□□□□ -1.37
RGPD5-204ENST00000413468 SHPRHQ149N8 1683 aa6.46□□□□□ -1.38
RGPD5-204ENST00000413468 WDR63Q8IWG1 891 aa6.46□□□□□ -1.38
RGPD5-204ENST00000413468 FRAT1Q92837 279 aaPredicted RBP6.46□□□□□ -1.38
RGPD5-204ENST00000413468 PDE3AQ14432 1141 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 TERF2IPQ9NYB0 399 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 TMEM131LA2VDJ0 1609 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 ATAD2Q6PL18 1390 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 ABCC11Q96J66 1382 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 YTHDC2Q9H6S0 1430 aaKnown RBP6.45□□□□□ -1.38
RGPD5-204ENST00000413468 MED1Q15648 1581 aaPredicted RBP6.45□□□□□ -1.38
RGPD5-204ENST00000413468 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
RGPD5-204ENST00000413468 RGS3P49796 1198 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 PIP4K2BP78356 416 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 PANK1Q8TE04 598 aa6.45□□□□□ -1.38
RGPD5-204ENST00000413468 HSPA1LP34931 641 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
RGPD5-204ENST00000413468 HDGFL2Q7Z4V5 671 aaPredicted RBP6.44□□□□□ -1.38
RGPD5-204ENST00000413468 MYH16Q9H6N6 1097 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 ZNF219Q9P2Y4 722 aaPredicted RBP6.44□□□□□ -1.38
RGPD5-204ENST00000413468 COG6Q9Y2V7 657 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 FAM161AQ3B820 660 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 CLUAP1Q96AJ1 413 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 DDRGK1Q96HY6 314 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 CDK19Q9BWU1 502 aa6.44□□□□□ -1.38
RGPD5-204ENST00000413468 FYB1O15117 783 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 IGHDP01880 384 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 CABP1Q9NZU7 370 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 MYO5BQ9ULV0 1848 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 ALKQ9UM73 1620 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 REREQ9P2R6 1566 aa6.43□□□□□ -1.38
RGPD5-204ENST00000413468 MAPK8IP3Q9UPT6 1336 aa6.42□□□□□ -1.38
RGPD5-204ENST00000413468 RTL5Q5HYW3 569 aaPredicted RBP6.42□□□□□ -1.38
RGPD5-204ENST00000413468 CLTCQ00610 1675 aaKnown RBP6.42□□□□□ -1.38
RGPD5-204ENST00000413468 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
RGPD5-204ENST00000413468 CD163L1Q9NR16 1453 aa6.42□□□□□ -1.38
RGPD5-204ENST00000413468 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 TSR2Q969E8 191 aaKnown RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 PLEKHF1Q96S99 279 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 LAS1LQ9Y4W2 734 aaKnown RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 AGLP35573 1532 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 RIMS2Q9UQ26 1411 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 RLBP1P12271 317 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 DEKP35659 375 aaKnown RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 TMPOP42166 694 aaKnown RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 DAXXQ9UER7 740 aaPredicted RBP6.41□□□□□ -1.38
RGPD5-204ENST00000413468 TNNQ9UQP3 1299 aa6.41□□□□□ -1.38
RGPD5-204ENST00000413468 A2ML1A8K2U0 1454 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 MED14O60244 1454 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 ZMYM3Q14202 1370 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 ZNF142P52746 1687 aaPredicted RBP6.4□□□□□ -1.38
RGPD5-204ENST00000413468 PPM1GO15355 546 aaPredicted RBP6.4□□□□□ -1.38
RGPD5-204ENST00000413468 AAMPQ13685 434 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 FTSJ3Q8IY81 847 aaKnown RBP6.4□□□□□ -1.38
RGPD5-204ENST00000413468 PMFBP1Q8TBY8 1022 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 PNNQ9H307 717 aaKnown RBP6.4□□□□□ -1.38
RGPD5-204ENST00000413468 COL3A1P02461 1466 aaPredicted RBP6.4□□□□□ -1.38
RGPD5-204ENST00000413468 NLRP1Q9C000 1473 aa6.4□□□□□ -1.38
RGPD5-204ENST00000413468 ADGRB2O60241 1585 aa6.4□□□□□ -1.39
RGPD5-204ENST00000413468 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.39
RGPD5-204ENST00000413468 RIPK4P57078 832 aa6.4□□□□□ -1.39
RGPD5-204ENST00000413468 EXOSC9Q06265 439 aaKnown RBP6.4□□□□□ -1.39
RGPD5-204ENST00000413468 ZKSCAN2Q63HK3 967 aa6.4□□□□□ -1.39
RGPD5-204ENST00000413468 TRIM35Q9UPQ4 493 aa6.4□□□□□ -1.39
RGPD5-204ENST00000413468 SMC4Q9NTJ3 1288 aa6.39□□□□□ -1.39
RGPD5-204ENST00000413468 CEP170BQ9Y4F5 1589 aaPredicted RBP6.39□□□□□ -1.39
RGPD5-204ENST00000413468 DLC1Q96QB1 1528 aa6.39□□□□□ -1.39
RGPD5-204ENST00000413468 NEFMP07197 916 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 SLC4A3P48751 1232 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 MVPQ14764 893 aaKnown RBP6.38□□□□□ -1.39
RGPD5-204ENST00000413468 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
RGPD5-204ENST00000413468 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.38□□□□□ -1.39
RGPD5-204ENST00000413468 RWDD1Q9H446 243 aaPredicted RBP6.38□□□□□ -1.39
RGPD5-204ENST00000413468 PCDHB15Q9Y5E8 787 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 PNPLA6Q8IY17 1366 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 IL16Q14005 1332 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 TOM1O60784 492 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 FCHSD2O94868 740 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 FBLN1P23142 703 aa6.38□□□□□ -1.39
RGPD5-204ENST00000413468 ATP7BP35670 1465 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 ANKRD26Q9UPS8 1709 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 WASLO00401 505 aaPredicted RBP6.37□□□□□ -1.39
RGPD5-204ENST00000413468 TXNDC2Q86VQ3 553 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 SSH1Q8WYL5 1049 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 POLKQ9UBT6 870 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 METP08581 1390 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 PPIP5K1Q6PFW1 1433 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 PRKAR2BP31323 418 aa6.37□□□□□ -1.39
RGPD5-204ENST00000413468 HDGFP51858 240 aaKnown RBP6.37□□□□□ -1.39
RGPD5-204ENST00000413468 ITPRIPQ8IWB1 547 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms