RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 G3V3G9 751 aa10.27□□□□□ -0.76
PBRM1-209ENST00000412587 USP8P40818 1118 aa10.27□□□□□ -0.76
PBRM1-209ENST00000412587 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.76
PBRM1-209ENST00000412587 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.76
PBRM1-209ENST00000412587 MEX3CQ5U5Q3 659 aaKnown RBP10.27□□□□□ -0.77
PBRM1-209ENST00000412587 NUCB2P80303 420 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 DMTNQ08495 405 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 DDX58O95786 925 aaKnown RBP10.27□□□□□ -0.77
PBRM1-209ENST00000412587 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-209ENST00000412587 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.77
PBRM1-209ENST00000412587 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
PBRM1-209ENST00000412587 AK7Q96M32 723 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 RDXP35241 583 aaKnown RBP10.26□□□□□ -0.77
PBRM1-209ENST00000412587 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-209ENST00000412587 FAM193AP78312 1265 aa10.26□□□□□ -0.77
PBRM1-209ENST00000412587 ABCC5O15440 1437 aa10.25□□□□□ -0.77
PBRM1-209ENST00000412587 TPM4P67936 248 aa10.25□□□□□ -0.77
PBRM1-209ENST00000412587 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
PBRM1-209ENST00000412587 DHX37Q8IY37 1157 aaKnown RBP10.25□□□□□ -0.77
PBRM1-209ENST00000412587 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
PBRM1-209ENST00000412587 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
PBRM1-209ENST00000412587 BCCIPQ9P287 314 aaKnown RBP eCLIP10.25□□□□□ -0.77
PBRM1-209ENST00000412587 CAVIN1Q6NZI2 390 aaKnown RBP10.24□□□□□ -0.77
PBRM1-209ENST00000412587 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 KIF14Q15058 1648 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 MAP3K1Q13233 1512 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 IFT57Q9NWB7 429 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 RTEL1-TNFRSF6BF6WH68 1400 aa10.24□□□□□ -0.77
PBRM1-209ENST00000412587 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-209ENST00000412587 PRKAR2BP31323 418 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 RILPL2Q969X0 211 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 TRERF1Q96PN7 1200 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 GAS2L2Q8NHY3 880 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.773e-6■■■■□ 24.4
PBRM1-209ENST00000412587 ST18O60284 1047 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
PBRM1-209ENST00000412587 SSR1P43307 286 aaKnown RBP10.22□□□□□ -0.77
PBRM1-209ENST00000412587 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
PBRM1-209ENST00000412587 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
PBRM1-209ENST00000412587 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
PBRM1-209ENST00000412587 MBD3O95983 291 aa10.21□□□□□ -0.77
PBRM1-209ENST00000412587 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.77
PBRM1-209ENST00000412587 NCOA1Q15788 1441 aa10.21□□□□□ -0.77
PBRM1-209ENST00000412587 PLEKHO1Q53GL0 409 aaPredicted RBP10.21□□□□□ -0.77
PBRM1-209ENST00000412587 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
PBRM1-209ENST00000412587 ZFP91Q96JP5 570 aaPredicted RBP10.21□□□□□ -0.78
PBRM1-209ENST00000412587 FEZ1Q99689 392 aa10.21□□□□□ -0.78
PBRM1-209ENST00000412587 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
PBRM1-209ENST00000412587 CCDC61Q9Y6R9 512 aa10.2□□□□□ -0.78
PBRM1-209ENST00000412587 TSPY26PQ9H489 355 aa10.2□□□□□ -0.78
PBRM1-209ENST00000412587 GIMAP7Q8NHV1 300 aa10.2□□□□□ -0.78
PBRM1-209ENST00000412587 DENND4BO75064 1496 aaPredicted RBP10.2□□□□□ -0.78
PBRM1-209ENST00000412587 FANCAO15360 1455 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 TDO2P48775 406 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 SULT6B1Q6IMI4 303 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
PBRM1-209ENST00000412587 TEX2Q8IWB9 1127 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 G3BP1Q13283 466 aaKnown RBP eCLIP10.19□□□□□ -0.78
PBRM1-209ENST00000412587 IDI1Q13907 227 aa10.19□□□□□ -0.78
PBRM1-209ENST00000412587 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
PBRM1-209ENST00000412587 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 KRT222Q8N1A0 295 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 H0YHG0 523 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 HSP90B2PQ58FF3 399 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 MNS1Q8NEH6 495 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 NUDT16Q96DE0 195 aaKnown RBP10.18□□□□□ -0.78
PBRM1-209ENST00000412587 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
PBRM1-209ENST00000412587 HMGB1P09429 215 aaKnown RBP10.17□□□□□ -0.78
PBRM1-209ENST00000412587 OGFRQ9NZT2 677 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 TNNT1P13805 278 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 WAPLQ7Z5K2 1190 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 PANK1Q8TE04 598 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 CEBPAP49715 358 aaPredicted RBP10.17□□□□□ -0.78
PBRM1-209ENST00000412587 HSP90AB4PQ58FF6 505 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 RASSF4Q9H2L5 321 aa10.17□□□□□ -0.78
PBRM1-209ENST00000412587 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
PBRM1-209ENST00000412587 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
PBRM1-209ENST00000412587 PRDM11Q9NQV5 511 aa10.16□□□□□ -0.78
PBRM1-209ENST00000412587 GTF2F1P35269 517 aaKnown RBP eCLIP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms