RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
SCAMP4-203ENST00000411971 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
SCAMP4-203ENST00000411971 NGDNQ8NEJ9 315 aaKnown RBP24.04■■□□□ 1.44
SCAMP4-203ENST00000411971 ONECUT3O60422 494 aaPredicted RBP24.02■■□□□ 1.44
SCAMP4-203ENST00000411971 BTG4Q9NY30 223 aa24.01■■□□□ 1.43
SCAMP4-203ENST00000411971 PAK3O75914 559 aaPredicted RBP24■■□□□ 1.43
SCAMP4-203ENST00000411971 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
SCAMP4-203ENST00000411971 QRICH2Q9H0J4 1663 aa23.99■■□□□ 1.43
SCAMP4-203ENST00000411971 NUTM2GQ5VZR2 741 aa23.98■■□□□ 1.43
SCAMP4-203ENST00000411971 SIN3AQ96ST3 1273 aa23.98■■□□□ 1.43
SCAMP4-203ENST00000411971 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
SCAMP4-203ENST00000411971 ACEP12821 1306 aa23.97■■□□□ 1.43
SCAMP4-203ENST00000411971 L3MBTL2Q969R5 705 aa23.96■■□□□ 1.43
SCAMP4-203ENST00000411971 BLMP54132 1417 aaPredicted RBP23.95■■□□□ 1.42
SCAMP4-203ENST00000411971 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
SCAMP4-203ENST00000411971 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
SCAMP4-203ENST00000411971 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.42
SCAMP4-203ENST00000411971 CHRNA2Q15822 529 aa23.94■■□□□ 1.42
SCAMP4-203ENST00000411971 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
SCAMP4-203ENST00000411971 THSD7AQ9UPZ6 1657 aa23.94■■□□□ 1.42
SCAMP4-203ENST00000411971 KIAA0232Q92628 1395 aa23.93■■□□□ 1.42
SCAMP4-203ENST00000411971 PLEKHG3A1L390 1219 aa23.93■■□□□ 1.42
SCAMP4-203ENST00000411971 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
SCAMP4-203ENST00000411971 CCDC61Q9Y6R9 512 aa23.93■■□□□ 1.42
SCAMP4-203ENST00000411971 NRKQ7Z2Y5 1582 aa23.93■■□□□ 1.42
SCAMP4-203ENST00000411971 KRT27Q7Z3Y8 459 aa23.92■■□□□ 1.42
SCAMP4-203ENST00000411971 SPATA31A5Q5VU36 1347 aa23.91■■□□□ 1.42
SCAMP4-203ENST00000411971 SPATA31A7Q8IWB4 1347 aa23.91■■□□□ 1.42
SCAMP4-203ENST00000411971 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
SCAMP4-203ENST00000411971 CABP2Q9NPB3 220 aa23.91■■□□□ 1.42
SCAMP4-203ENST00000411971 CENPJQ9HC77 1338 aaPredicted RBP23.9■■□□□ 1.42
SCAMP4-203ENST00000411971 ZC3H6P61129 1189 aaKnown RBP23.9■■□□□ 1.42
SCAMP4-203ENST00000411971 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
SCAMP4-203ENST00000411971 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.41
SCAMP4-203ENST00000411971 LMO7Q8WWI1 1683 aa23.87■■□□□ 1.41
SCAMP4-203ENST00000411971 CAMTA1Q9Y6Y1 1673 aa23.86■■□□□ 1.41
SCAMP4-203ENST00000411971 A0A0G2JS52 829 aa23.86■■□□□ 1.41
SCAMP4-203ENST00000411971 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
SCAMP4-203ENST00000411971 MYT1Q01538 1121 aa23.86■■□□□ 1.41
SCAMP4-203ENST00000411971 ZRANB1Q9UGI0 708 aa23.85■■□□□ 1.41
SCAMP4-203ENST00000411971 USP19O94966 1318 aa23.84■■□□□ 1.41
SCAMP4-203ENST00000411971 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
SCAMP4-203ENST00000411971 SPATA31A1Q5TZJ5 1347 aa23.84■■□□□ 1.41
SCAMP4-203ENST00000411971 ABTB2Q8N961 1025 aa23.83■■□□□ 1.41
SCAMP4-203ENST00000411971 STRN4Q9NRL3 753 aa23.83■■□□□ 1.41
SCAMP4-203ENST00000411971 TNS1Q9HBL0 1735 aaKnown RBP23.83■■□□□ 1.41
SCAMP4-203ENST00000411971 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
SCAMP4-203ENST00000411971 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
SCAMP4-203ENST00000411971 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
SCAMP4-203ENST00000411971 USP6P35125 1406 aa23.79■■□□□ 1.4
SCAMP4-203ENST00000411971 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
SCAMP4-203ENST00000411971 AKAP12Q02952 1782 aa23.78■■□□□ 1.4
SCAMP4-203ENST00000411971 CPDO75976 1380 aa23.78■■□□□ 1.4
SCAMP4-203ENST00000411971 LARP1Q6PKG0 1096 aaKnown RBP23.77■■□□□ 1.4
SCAMP4-203ENST00000411971 GCP02774 474 aa23.76■■□□□ 1.39
SCAMP4-203ENST00000411971 USP35Q9P2H5 1018 aa23.76■■□□□ 1.39
SCAMP4-203ENST00000411971 COL18A1P39060 1754 aa23.75■■□□□ 1.39
SCAMP4-203ENST00000411971 SLIT3O75094 1523 aa23.75■■□□□ 1.39
SCAMP4-203ENST00000411971 SF3B2Q13435 895 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-203ENST00000411971 ROCK2O75116 1388 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-203ENST00000411971 EN1Q05925 392 aaPredicted RBP23.73■■□□□ 1.39
SCAMP4-203ENST00000411971 NLRP13Q86W25 1043 aa23.73■■□□□ 1.39
SCAMP4-203ENST00000411971 RGPD5Q99666 1765 aa23.73■■□□□ 1.39
SCAMP4-203ENST00000411971 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
SCAMP4-203ENST00000411971 EVC2Q86UK5 1308 aa23.7■■□□□ 1.38
SCAMP4-203ENST00000411971 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
SCAMP4-203ENST00000411971 BAG6P46379 1132 aa23.69■■□□□ 1.38
SCAMP4-203ENST00000411971 EVA1CP58658 441 aa23.69■■□□□ 1.38
SCAMP4-203ENST00000411971 NLRP6P59044 892 aa23.69■■□□□ 1.38
SCAMP4-203ENST00000411971 BARGINQ6ZT62 677 aa23.69■■□□□ 1.38
SCAMP4-203ENST00000411971 BRD4O60885 1362 aaPredicted RBP23.68■■□□□ 1.38
SCAMP4-203ENST00000411971 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
SCAMP4-203ENST00000411971 DISP2A7MBM2 1401 aa23.67■■□□□ 1.38
SCAMP4-203ENST00000411971 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
SCAMP4-203ENST00000411971 TRIM37O94972 964 aa23.67■■□□□ 1.38
SCAMP4-203ENST00000411971 MON2Q7Z3U7 1717 aa23.67■■□□□ 1.38
SCAMP4-203ENST00000411971 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
SCAMP4-203ENST00000411971 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-203ENST00000411971 TTC21BQ7Z4L5 1316 aa23.65■■□□□ 1.38
SCAMP4-203ENST00000411971 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
SCAMP4-203ENST00000411971 AXIN2Q9Y2T1 843 aa23.65■■□□□ 1.38
SCAMP4-203ENST00000411971 WNK3Q9BYP7 1800 aa23.65■■□□□ 1.38
SCAMP4-203ENST00000411971 LRP5O75197 1615 aa23.64■■□□□ 1.38
SCAMP4-203ENST00000411971 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
SCAMP4-203ENST00000411971 LRRC37A3O60309 1634 aa23.63■■□□□ 1.37
SCAMP4-203ENST00000411971 AATKQ6ZMQ8 1374 aa23.63■■□□□ 1.37
SCAMP4-203ENST00000411971 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
SCAMP4-203ENST00000411971 CRB1P82279 1406 aa23.62■■□□□ 1.37
SCAMP4-203ENST00000411971 CAMKK2Q96RR4 588 aa23.62■■□□□ 1.37
SCAMP4-203ENST00000411971 RREB1Q92766 1687 aa23.62■■□□□ 1.37
SCAMP4-203ENST00000411971 SBF2Q86WG5 1849 aa23.61■■□□□ 1.37
SCAMP4-203ENST00000411971 NFAT5O94916 1531 aa23.61■■□□□ 1.37
SCAMP4-203ENST00000411971 FAM196AQ6ZSG2 479 aa23.61■■□□□ 1.37
SCAMP4-203ENST00000411971 NUP188Q5SRE5 1749 aa23.6■■□□□ 1.37
SCAMP4-203ENST00000411971 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.37
SCAMP4-203ENST00000411971 SOX12O15370 315 aa23.58■■□□□ 1.37
SCAMP4-203ENST00000411971 PDE3BQ13370 1112 aa23.58■■□□□ 1.37
SCAMP4-203ENST00000411971 ARHGEF25Q86VW2 580 aa23.58■■□□□ 1.37
SCAMP4-203ENST00000411971 KTN1Q86UP2 1357 aaKnown RBP23.57■■□□□ 1.36
SCAMP4-203ENST00000411971 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms