RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
LMO2-203ENST00000411482 ORAI2Q96SN7 254 aa25.66■■□□□ 1.7
LMO2-203ENST00000411482 CDK19Q9BWU1 502 aa25.66■■□□□ 1.7
LMO2-203ENST00000411482 NUTM2FA1L443 756 aa25.65■■□□□ 1.7
LMO2-203ENST00000411482 WASLO00401 505 aaPredicted RBP25.65■■□□□ 1.7
LMO2-203ENST00000411482 A0A1W2PP64 1363 aa25.65■■□□□ 1.7
LMO2-203ENST00000411482 HSPA1LP34931 641 aa25.64■■□□□ 1.7
LMO2-203ENST00000411482 PELP1Q8IZL8 1130 aaKnown RBP25.64■■□□□ 1.7
LMO2-203ENST00000411482 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
LMO2-203ENST00000411482 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
LMO2-203ENST00000411482 PRR36Q9H6K5 1346 aa25.61■■□□□ 1.69
LMO2-203ENST00000411482 ZNF521Q96K83 1311 aa25.59■■□□□ 1.69
LMO2-203ENST00000411482 ATP7BP35670 1465 aa25.58■■□□□ 1.68
LMO2-203ENST00000411482 ESCO1Q5FWF5 840 aa25.58■■□□□ 1.68
LMO2-203ENST00000411482 ANKARQ7Z5J8 1434 aa25.57■■□□□ 1.68
LMO2-203ENST00000411482 DDX17Q92841 729 aaKnown RBP25.57■■□□□ 1.68
LMO2-203ENST00000411482 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
LMO2-203ENST00000411482 AHDC1Q5TGY3 1603 aaPredicted RBP25.56■■□□□ 1.68
LMO2-203ENST00000411482 HDGFL2Q7Z4V5 671 aaPredicted RBP25.54■■□□□ 1.68
LMO2-203ENST00000411482 NUDT16Q96DE0 195 aaKnown RBP25.54■■□□□ 1.68
LMO2-203ENST00000411482 PPP4R2Q9NY27 417 aa25.54■■□□□ 1.68
LMO2-203ENST00000411482 PHLPP1O60346 1717 aa25.54■■□□□ 1.68
LMO2-203ENST00000411482 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
LMO2-203ENST00000411482 SHPRHQ149N8 1683 aa25.54■■□□□ 1.68
LMO2-203ENST00000411482 SENP3-EIF4A1A0A087X0R7 540 aa25.53■■□□□ 1.68
LMO2-203ENST00000411482 CABP1Q9NZU7 370 aa25.53■■□□□ 1.68
LMO2-203ENST00000411482 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
LMO2-203ENST00000411482 FYB1O15117 783 aa25.52■■□□□ 1.68
LMO2-203ENST00000411482 CPSF1Q10570 1443 aaKnown RBP25.51■■□□□ 1.67
LMO2-203ENST00000411482 IRX6P78412 446 aaPredicted RBP25.51■■□□□ 1.67
LMO2-203ENST00000411482 PHF8Q9UPP1 1060 aa25.51■■□□□ 1.67
LMO2-203ENST00000411482 FOXO3O43524 673 aa25.5■■□□□ 1.67
LMO2-203ENST00000411482 MTHFSP49914 203 aa25.5■■□□□ 1.67
LMO2-203ENST00000411482 CDCA7LQ96GN5 454 aa25.5■■□□□ 1.67
LMO2-203ENST00000411482 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
LMO2-203ENST00000411482 NCBP3Q53F19 620 aaKnown RBP25.48■■□□□ 1.67
LMO2-203ENST00000411482 CFAP53Q96M91 514 aa25.48■■□□□ 1.67
LMO2-203ENST00000411482 KIF1AQ12756 1690 aa25.48■■□□□ 1.67
LMO2-203ENST00000411482 TOPAZ1Q8N9V7 1692 aa25.48■■□□□ 1.67
LMO2-203ENST00000411482 SOS2Q07890 1332 aaPredicted RBP25.48■■□□□ 1.67
LMO2-203ENST00000411482 PMFBP1Q8TBY8 1022 aa25.47■■□□□ 1.67
LMO2-203ENST00000411482 RCAN3Q9UKA8 241 aa25.47■■□□□ 1.67
LMO2-203ENST00000411482 CCDC61Q9Y6R9 512 aa25.47■■□□□ 1.67
LMO2-203ENST00000411482 ITSN1Q15811 1721 aa25.47■■□□□ 1.67
LMO2-203ENST00000411482 TRMT2AQ8IZ69 625 aaKnown RBP25.46■■□□□ 1.67
LMO2-203ENST00000411482 PXDNQ92626 1479 aa25.45■■□□□ 1.67
LMO2-203ENST00000411482 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
LMO2-203ENST00000411482 NPHP3Q7Z494 1330 aa25.44■■□□□ 1.66
LMO2-203ENST00000411482 EDC4Q6P2E9 1401 aaKnown RBP25.43■■□□□ 1.66
LMO2-203ENST00000411482 KIF20BQ96Q89 1820 aa25.43■■□□□ 1.66
LMO2-203ENST00000411482 APAF1O14727 1248 aa25.42■■□□□ 1.66
LMO2-203ENST00000411482 TNNT2P45379 298 aaPredicted RBP25.42■■□□□ 1.66
LMO2-203ENST00000411482 XPCQ01831 940 aaPredicted RBP25.42■■□□□ 1.66
LMO2-203ENST00000411482 GOLGA2Q08379 1002 aa25.42■■□□□ 1.66
LMO2-203ENST00000411482 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
LMO2-203ENST00000411482 PPIP5K1Q6PFW1 1433 aa25.42■■□□□ 1.66
LMO2-203ENST00000411482 DUSP27Q5VZP5 1158 aa25.42■■□□□ 1.66
LMO2-203ENST00000411482 PNPLA6Q8IY17 1366 aa25.41■■□□□ 1.66
LMO2-203ENST00000411482 COL3A1P02461 1466 aaPredicted RBP25.41■■□□□ 1.66
LMO2-203ENST00000411482 RRP1P56182 461 aaKnown RBP25.41■■□□□ 1.66
LMO2-203ENST00000411482 SLFN5Q08AF3 891 aa25.41■■□□□ 1.66
LMO2-203ENST00000411482 KRT28Q7Z3Y7 464 aa25.4■■□□□ 1.66
LMO2-203ENST00000411482 CCDC146Q8IYE0 955 aa25.4■■□□□ 1.66
LMO2-203ENST00000411482 RUNDC1Q96C34 613 aa25.4■■□□□ 1.66
LMO2-203ENST00000411482 LRRC59Q96AG4 307 aaKnown RBP25.39■■□□□ 1.66
LMO2-203ENST00000411482 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
LMO2-203ENST00000411482 ACEP12821 1306 aa25.37■■□□□ 1.65
LMO2-203ENST00000411482 ZNF692Q9BU19 519 aaPredicted RBP25.37■■□□□ 1.65
LMO2-203ENST00000411482 MON2Q7Z3U7 1717 aa25.36■■□□□ 1.65
LMO2-203ENST00000411482 JCADQ9P266 1359 aa25.36■■□□□ 1.65
LMO2-203ENST00000411482 PSME1Q06323 249 aa25.36■■□□□ 1.65
LMO2-203ENST00000411482 NGDNQ8NEJ9 315 aaKnown RBP25.36■■□□□ 1.65
LMO2-203ENST00000411482 TRPM3Q9HCF6 1732 aaPredicted RBP25.36■■□□□ 1.65
LMO2-203ENST00000411482 AKAP12Q02952 1782 aa25.35■■□□□ 1.65
LMO2-203ENST00000411482 CCDC27Q2M243 656 aa25.34■■□□□ 1.65
LMO2-203ENST00000411482 SPATA31A3Q5VYP0 1347 aa25.33■■□□□ 1.65
LMO2-203ENST00000411482 E9PSI1 815 aa25.32■■□□□ 1.64
LMO2-203ENST00000411482 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
LMO2-203ENST00000411482 AATKQ6ZMQ8 1374 aa25.31■■□□□ 1.64
LMO2-203ENST00000411482 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
LMO2-203ENST00000411482 TSHZ2Q9NRE2 1034 aa25.3■■□□□ 1.64
LMO2-203ENST00000411482 TCP11L2Q8N4U5 519 aa25.29■■□□□ 1.64
LMO2-203ENST00000411482 ALS2Q96Q42 1657 aa25.28■■□□□ 1.64
LMO2-203ENST00000411482 TNS3Q68CZ2 1445 aa25.27■■□□□ 1.64
LMO2-203ENST00000411482 COL22A1Q8NFW1 1626 aaPredicted RBP25.27■■□□□ 1.64
LMO2-203ENST00000411482 WDR63Q8IWG1 891 aa25.27■■□□□ 1.64
LMO2-203ENST00000411482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.27■■□□□ 1.64
LMO2-203ENST00000411482 SPINK5Q9NQ38 1064 aaPredicted RBP25.27■■□□□ 1.64
LMO2-203ENST00000411482 POLKQ9UBT6 870 aa25.27■■□□□ 1.64
LMO2-203ENST00000411482 SSH2Q76I76 1423 aa25.26■■□□□ 1.63
LMO2-203ENST00000411482 U2AF1L5P0DN76 240 aaPredicted RBP25.26■■□□□ 1.63
LMO2-203ENST00000411482 U2AF1Q01081 240 aaKnown RBP eCLIP25.26■■□□□ 1.63
LMO2-203ENST00000411482 PLEKHF1Q96S99 279 aa25.26■■□□□ 1.63
LMO2-203ENST00000411482 USP6P35125 1406 aa25.25■■□□□ 1.63
LMO2-203ENST00000411482 SPATA31A6Q5VVP1 1343 aa25.25■■□□□ 1.63
LMO2-203ENST00000411482 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
LMO2-203ENST00000411482 B4GALNT3Q6L9W6 998 aa25.23■■□□□ 1.63
LMO2-203ENST00000411482 NRKQ7Z2Y5 1582 aa25.23■■□□□ 1.63
LMO2-203ENST00000411482 LRP6O75581 1613 aa25.23■■□□□ 1.63
LMO2-203ENST00000411482 NME9Q86XW9 330 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms