RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CCDC191Q8NCU4 936 aa13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 BICDL1Q6ZP65 573 aa13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 MYL6BP14649 208 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 ZNF76P36508 570 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 SCLT1Q96NL6 688 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 ZNF644Q9H582 1327 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 SMC2O95347 1197 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 SSR1P43307 286 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 GRM1Q13255 1194 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 FSD1Q9BTV5 496 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 GPRASP1Q5JY77 1395 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 PSMD1Q99460 953 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
PRPF40A-202ENST00000410080 WDR78Q5VTH9 848 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 SKOR2Q2VWA4 1001 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 DRC1Q96MC2 740 aa13.41□□□□□ -0.26
PRPF40A-202ENST00000410080 DESP17661 470 aa13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 GBP2P32456 591 aaPredicted RBP13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 CABP4P57796 275 aa13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 H0YHG0 523 aa13.4□□□□□ -0.26
PRPF40A-202ENST00000410080 NLRP6P59044 892 aa13.4□□□□□ -0.27
PRPF40A-202ENST00000410080 USP5P45974 858 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 MPHOSPH8Q99549 860 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 ERLIN2O94905 339 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
PRPF40A-202ENST00000410080 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 SIL1Q9H173 461 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.272e-7■■■■■ 28.8
PRPF40A-202ENST00000410080 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 PSMA5P28066 241 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
PRPF40A-202ENST00000410080 SSBP05455 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRPF40A-202ENST00000410080 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-202ENST00000410080 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
PRPF40A-202ENST00000410080 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-202ENST00000410080 LNPKQ9C0E8 428 aa13.37□□□□□ -0.27
PRPF40A-202ENST00000410080 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.279e-7■□□□□ 10
PRPF40A-202ENST00000410080 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 TAX1BP1Q86VP1 789 aa13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 RUNDC1Q96C34 613 aa13.36□□□□□ -0.27
PRPF40A-202ENST00000410080 CCDC181Q5TID7 509 aa13.35□□□□□ -0.27
PRPF40A-202ENST00000410080 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
PRPF40A-202ENST00000410080 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
PRPF40A-202ENST00000410080 ANAPC15P60006 121 aa13.35□□□□□ -0.27
PRPF40A-202ENST00000410080 STK3Q13188 491 aa13.35□□□□□ -0.27
PRPF40A-202ENST00000410080 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 PDE4AP27815 886 aa13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
PRPF40A-202ENST00000410080 KINO60870 393 aaKnown RBP13.33□□□□□ -0.27
PRPF40A-202ENST00000410080 API5Q9BZZ5 524 aaKnown RBP13.33□□□□□ -0.27
PRPF40A-202ENST00000410080 ZNHIT6Q9NWK9 470 aaKnown RBP13.33□□□□□ -0.27
PRPF40A-202ENST00000410080 STIM1Q13586 685 aa13.33□□□□□ -0.28
PRPF40A-202ENST00000410080 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
PRPF40A-202ENST00000410080 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
PRPF40A-202ENST00000410080 CUX1P39880 1505 aa13.33□□□□□ -0.28
PRPF40A-202ENST00000410080 PANK1Q8TE04 598 aa13.33□□□□□ -0.28
PRPF40A-202ENST00000410080 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
PRPF40A-202ENST00000410080 TSPYL1Q9H0U9 437 aa13.32□□□□□ -0.28
PRPF40A-202ENST00000410080 ANKIB1Q9P2G1 1089 aa13.32□□□□□ -0.28
PRPF40A-202ENST00000410080 PLEKHO1Q53GL0 409 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 TDO2P48775 406 aa13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 CLASRPQ8N2M8 674 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-202ENST00000410080 ZPR1O75312 459 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms