RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CABLES1Q8TDN4 633 aa33.35■■■□□ 2.93
UBE2E3-202ENST00000410062 AKAP12Q02952 1782 aa33.34■■■□□ 2.93
UBE2E3-202ENST00000410062 CPSF1Q10570 1443 aaKnown RBP33.33■■■□□ 2.93
UBE2E3-202ENST00000410062 ZNF692Q9BU19 519 aaPredicted RBP33.32■■■□□ 2.92
UBE2E3-202ENST00000410062 CD163L1Q9NR16 1453 aa33.31■■■□□ 2.92
UBE2E3-202ENST00000410062 CDCA8Q53HL2 280 aa33.3■■■□□ 2.92
UBE2E3-202ENST00000410062 NUTM2GQ5VZR2 741 aa33.3■■■□□ 2.92
UBE2E3-202ENST00000410062 KTN1Q86UP2 1357 aaKnown RBP33.29■■■□□ 2.92
UBE2E3-202ENST00000410062 ABTB2Q8N961 1025 aa33.28■■■□□ 2.92
UBE2E3-202ENST00000410062 C8orf37Q96NL8 207 aa33.28■■■□□ 2.92
UBE2E3-202ENST00000410062 BRD4O60885 1362 aaPredicted RBP33.28■■■□□ 2.92
UBE2E3-202ENST00000410062 SSH2Q76I76 1423 aa33.27■■■□□ 2.92
UBE2E3-202ENST00000410062 ABCA3Q99758 1704 aa33.27■■■□□ 2.92
UBE2E3-202ENST00000410062 HAP1P54257 671 aaPredicted RBP33.27■■■□□ 2.92
UBE2E3-202ENST00000410062 RGS17Q9UGC6 210 aaPredicted RBP33.27■■■□□ 2.92
UBE2E3-202ENST00000410062 NINLQ9Y2I6 1382 aa33.26■■■□□ 2.92
UBE2E3-202ENST00000410062 MON2Q7Z3U7 1717 aa33.26■■■□□ 2.91
UBE2E3-202ENST00000410062 HDGFL2Q7Z4V5 671 aaPredicted RBP33.26■■■□□ 2.91
UBE2E3-202ENST00000410062 TERF2IPQ9NYB0 399 aa33.25■■■□□ 2.91
UBE2E3-202ENST00000410062 A0A1W2PP64 1363 aa33.24■■■□□ 2.91
UBE2E3-202ENST00000410062 NRKQ7Z2Y5 1582 aa33.23■■■□□ 2.91
UBE2E3-202ENST00000410062 TTC21BQ7Z4L5 1316 aa33.23■■■□□ 2.91
UBE2E3-202ENST00000410062 MARF1Q9Y4F3 1742 aaKnown RBP33.23■■■□□ 2.91
UBE2E3-202ENST00000410062 CRYBG1Q9Y4K1 1723 aa33.22■■■□□ 2.91
UBE2E3-202ENST00000410062 POLR3GLQ9BT43 218 aa33.21■■■□□ 2.91
UBE2E3-202ENST00000410062 NGLY1Q96IV0 654 aa33.21■■■□□ 2.91
UBE2E3-202ENST00000410062 AFF2P51816 1311 aa33.2■■■□□ 2.91
UBE2E3-202ENST00000410062 PIK3C2AO00443 1686 aa33.19■■■□□ 2.9
UBE2E3-202ENST00000410062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.18■■■□□ 2.9
UBE2E3-202ENST00000410062 MYOM1P52179 1685 aa33.18■■■□□ 2.9
UBE2E3-202ENST00000410062 C11orf95C9JLR9 678 aaPredicted RBP33.17■■■□□ 2.9
UBE2E3-202ENST00000410062 TTC21AQ8NDW8 1320 aa33.17■■■□□ 2.9
UBE2E3-202ENST00000410062 NLRP6P59044 892 aa33.17■■■□□ 2.9
UBE2E3-202ENST00000410062 NLRP13Q86W25 1043 aa33.17■■■□□ 2.9
UBE2E3-202ENST00000410062 PHRF1Q9P1Y6 1649 aaKnown RBP33.16■■■□□ 2.9
UBE2E3-202ENST00000410062 ANKRD36BQ8N2N9 1353 aa33.16■■■□□ 2.9
UBE2E3-202ENST00000410062 EDC4Q6P2E9 1401 aaKnown RBP33.14■■■□□ 2.9
UBE2E3-202ENST00000410062 USP19O94966 1318 aa33.13■■■□□ 2.89
UBE2E3-202ENST00000410062 ZNF772Q68DY9 489 aaPredicted RBP33.13■■■□□ 2.89
UBE2E3-202ENST00000410062 POTEAQ6S8J7 498 aa33.13■■■□□ 2.89
UBE2E3-202ENST00000410062 NME9Q86XW9 330 aa33.1■■■□□ 2.89
UBE2E3-202ENST00000410062 FNBP4Q8N3X1 1017 aaPredicted RBP33.1■■■□□ 2.89
UBE2E3-202ENST00000410062 ZRANB1Q9UGI0 708 aa33.09■■■□□ 2.89
UBE2E3-202ENST00000410062 FAM83GA6ND36 823 aa33.09■■■□□ 2.89
UBE2E3-202ENST00000410062 USP21Q9UK80 565 aa33.09■■■□□ 2.89
UBE2E3-202ENST00000410062 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
UBE2E3-202ENST00000410062 GCP02774 474 aa33.07■■■□□ 2.88
UBE2E3-202ENST00000410062 ILDR2Q71H61 639 aa33.06■■■□□ 2.88
UBE2E3-202ENST00000410062 KIAA0232Q92628 1395 aa33.06■■■□□ 2.88
UBE2E3-202ENST00000410062 SLIT3O75094 1523 aa33.05■■■□□ 2.88
UBE2E3-202ENST00000410062 SLIT2O94813 1529 aa33.04■■■□□ 2.88
UBE2E3-202ENST00000410062 PLCH1Q4KWH8 1693 aa33.04■■■□□ 2.88
UBE2E3-202ENST00000410062 PRDM11Q9NQV5 511 aa33.04■■■□□ 2.88
UBE2E3-202ENST00000410062 KIF7Q2M1P5 1343 aa33.04■■■□□ 2.88
UBE2E3-202ENST00000410062 BCL9LQ86UU0 1499 aa33.04■■■□□ 2.88
UBE2E3-202ENST00000410062 CARD14Q9BXL6 1004 aa33.03■■■□□ 2.88
UBE2E3-202ENST00000410062 USP31Q70CQ4 1352 aa33.02■■■□□ 2.88
UBE2E3-202ENST00000410062 CHRNA2Q15822 529 aa33.01■■■□□ 2.88
UBE2E3-202ENST00000410062 QTRT2Q9H974 415 aaKnown RBP33.01■■■□□ 2.88
UBE2E3-202ENST00000410062 COL14A1Q05707 1796 aaKnown RBP33.01■■■□□ 2.88
UBE2E3-202ENST00000410062 SOX12O15370 315 aa33■■■□□ 2.87
UBE2E3-202ENST00000410062 USP54Q70EL1 1684 aa32.99■■■□□ 2.87
UBE2E3-202ENST00000410062 UNC5CLQ8IV45 518 aa32.98■■■□□ 2.87
UBE2E3-202ENST00000410062 BTG4Q9NY30 223 aa32.98■■■□□ 2.87
UBE2E3-202ENST00000410062 NSD3Q9BZ95 1437 aa32.98■■■□□ 2.87
UBE2E3-202ENST00000410062 NWD2Q9ULI1 1742 aa32.97■■■□□ 2.87
UBE2E3-202ENST00000410062 CPDO75976 1380 aa32.97■■■□□ 2.87
UBE2E3-202ENST00000410062 OVOS2A0A0J9YW53 1432 aa32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 OVOS2Q6IE36 1432 aa32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 ZBTB7CA1YPR0 619 aa32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 ZEB1P37275 1124 aaPredicted RBP32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 KCNH5Q8NCM2 988 aa32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 TRPC5Q9UL62 973 aaPredicted RBP32.96■■■□□ 2.87
UBE2E3-202ENST00000410062 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.95■■■□□ 2.87
UBE2E3-202ENST00000410062 PANK3Q9H999 370 aa32.95■■■□□ 2.86
UBE2E3-202ENST00000410062 ATRNO75882 1429 aa32.94■■■□□ 2.86
UBE2E3-202ENST00000410062 FYB1O15117 783 aa32.94■■■□□ 2.86
UBE2E3-202ENST00000410062 GGNBP2Q9H3C7 697 aa32.93■■■□□ 2.86
UBE2E3-202ENST00000410062 RXRBP28702 533 aa32.92■■■□□ 2.86
UBE2E3-202ENST00000410062 NFAT5O94916 1531 aa32.92■■■□□ 2.86
UBE2E3-202ENST00000410062 WASHC2AQ641Q2 1341 aa32.92■■■□□ 2.86
UBE2E3-202ENST00000410062 CCDC7Q96M83 1385 aa32.92■■■□□ 2.86
UBE2E3-202ENST00000410062 COG3Q96JB2 828 aa32.92■■■□□ 2.86
UBE2E3-202ENST00000410062 NRAPQ86VF7 1730 aa32.91■■■□□ 2.86
UBE2E3-202ENST00000410062 KIF20BQ96Q89 1820 aa32.91■■■□□ 2.86
UBE2E3-202ENST00000410062 RBM6P78332 1123 aaKnown RBP32.88■■■□□ 2.85
UBE2E3-202ENST00000410062 ARHGEF25Q86VW2 580 aa32.88■■■□□ 2.85
UBE2E3-202ENST00000410062 LMO7Q8WWI1 1683 aa32.87■■■□□ 2.85
UBE2E3-202ENST00000410062 CAMTA1Q9Y6Y1 1673 aa32.87■■■□□ 2.85
UBE2E3-202ENST00000410062 VPS72Q15906 364 aa32.85■■■□□ 2.85
UBE2E3-202ENST00000410062 GJD4Q96KN9 370 aaPredicted RBP32.85■■■□□ 2.85
UBE2E3-202ENST00000410062 STRN4Q9NRL3 753 aa32.84■■■□□ 2.85
UBE2E3-202ENST00000410062 CCDC9Q9Y3X0 531 aaKnown RBP32.84■■■□□ 2.85
UBE2E3-202ENST00000410062 CGNL1Q0VF96 1302 aa32.84■■■□□ 2.85
UBE2E3-202ENST00000410062 AATKQ6ZMQ8 1374 aa32.84■■■□□ 2.85
UBE2E3-202ENST00000410062 COL18A1P39060 1754 aa32.83■■■□□ 2.85
UBE2E3-202ENST00000410062 FBLN1P23142 703 aa32.81■■■□□ 2.84
UBE2E3-202ENST00000410062 LTN1O94822 1766 aa32.81■■■□□ 2.84
UBE2E3-202ENST00000410062 GLI3P10071 1580 aa32.81■■■□□ 2.84
UBE2E3-202ENST00000410062 EVA1CP58658 441 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms