RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 CNTROBQ8N137 903 aa11.02□□□□□ -0.64
PBRM1-208ENST00000410007 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.64
PBRM1-208ENST00000410007 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 GOLGA6L19H0YKK7 550 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 FCHSD2O94868 740 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 GNAI2P04899 355 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
PBRM1-208ENST00000410007 BECN2A8MW95 431 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 TPM3P06753 285 aa11.02□□□□□ -0.65
PBRM1-208ENST00000410007 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.65
PBRM1-208ENST00000410007 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
PBRM1-208ENST00000410007 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 CCDC47Q96A33 483 aaKnown RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 SMC3Q9UQE7 1217 aa11.01□□□□□ -0.65
PBRM1-208ENST00000410007 DENND4BO75064 1496 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
PBRM1-208ENST00000410007 CEP89Q96ST8 783 aa11.01□□□□□ -0.65
PBRM1-208ENST00000410007 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
PBRM1-208ENST00000410007 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
PBRM1-208ENST00000410007 AKNAQ7Z591 1439 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
PBRM1-208ENST00000410007 CCDC27Q2M243 656 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 KLHL34Q8N239 644 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 HIP1O00291 1037 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 PES1O00541 588 aaKnown RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 TPM2P07951 284 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 NOC3LQ8WTT2 800 aaKnown RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 GCC1Q96CN9 775 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
PBRM1-208ENST00000410007 ZNF428Q96B54 188 aa11□□□□□ -0.65
PBRM1-208ENST00000410007 PSMA5P28066 241 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 NUCB2P80303 420 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 HMGB2P26583 209 aaKnown RBP10.99□□□□□ -0.65
PBRM1-208ENST00000410007 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-208ENST00000410007 NSD3Q9BZ95 1437 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 RRS1Q15050 365 aaKnown RBP10.99□□□□□ -0.65
PBRM1-208ENST00000410007 HOOK1Q9UJC3 728 aaKnown RBP10.99□□□□□ -0.65
PBRM1-208ENST00000410007 TPM1P09493 284 aa10.99□□□□□ -0.65
PBRM1-208ENST00000410007 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
PBRM1-208ENST00000410007 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
PBRM1-208ENST00000410007 NCOA1Q15788 1441 aa10.98□□□□□ -0.65
PBRM1-208ENST00000410007 VPS37CA5D8V6 355 aaPredicted RBP10.98□□□□□ -0.65
PBRM1-208ENST00000410007 FANCAO15360 1455 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-208ENST00000410007 IDI1Q13907 227 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 WAPLQ7Z5K2 1190 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 BICD2Q8TD16 824 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 CNNM1Q9NRU3 951 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
PBRM1-208ENST00000410007 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
PBRM1-208ENST00000410007 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
PBRM1-208ENST00000410007 ZC3H6P61129 1189 aaKnown RBP10.97□□□□□ -0.65
PBRM1-208ENST00000410007 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
PBRM1-208ENST00000410007 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.65
PBRM1-208ENST00000410007 ANKRD20A12PQ8NF67 263 aa10.96□□□□□ -0.65
PBRM1-208ENST00000410007 XPCQ01831 940 aaPredicted RBP10.96□□□□□ -0.65
PBRM1-208ENST00000410007 XBP1P17861 261 aa10.96□□□□□ -0.66
PBRM1-208ENST00000410007 FYB1O15117 783 aa10.96□□□□□ -0.66
PBRM1-208ENST00000410007 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
PBRM1-208ENST00000410007 BTBD11A6QL63 1104 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 DNAJC2Q99543 621 aaKnown RBP10.95□□□□□ -0.66
PBRM1-208ENST00000410007 BRMS1Q9HCU9 246 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 AMOTL2Q9Y2J4 779 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
PBRM1-208ENST00000410007 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
PBRM1-208ENST00000410007 PIP4K2BP78356 416 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
PBRM1-208ENST00000410007 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.95□□□□□ -0.66
PBRM1-208ENST00000410007 FANCIQ9NVI1 1328 aa10.94□□□□□ -0.66
PBRM1-208ENST00000410007 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
PBRM1-208ENST00000410007 BCAR3O75815 825 aa10.94□□□□□ -0.66
PBRM1-208ENST00000410007 TMPOP42166 694 aaKnown RBP10.94□□□□□ -0.66
PBRM1-208ENST00000410007 CCDC43Q96MW1 224 aaKnown RBP10.94□□□□□ -0.66
PBRM1-208ENST00000410007 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■■■ 30.9
PBRM1-208ENST00000410007 CWC22Q9HCG8 908 aaKnown RBP10.94□□□□□ -0.66
PBRM1-208ENST00000410007 WASLO00401 505 aaPredicted RBP10.94□□□□□ -0.66
PBRM1-208ENST00000410007 MCM2P49736 904 aa10.94□□□□□ -0.66
PBRM1-208ENST00000410007 TTC39AQ5SRH9 613 aa10.94□□□□□ -0.66
PBRM1-208ENST00000410007 MYL6BP14649 208 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 LRRCC1Q9C099 1032 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 ADGRF5Q8IZF2 1346 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 CCDC57Q2TAC2 916 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 BIVM-ERCC5R4GMW8 1640 aa10.93□□□□□ -0.66
PBRM1-208ENST00000410007 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
PBRM1-208ENST00000410007 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms