RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LRPPRCP42704 1394 aaKnown RBP10.11□□□□□ -0.79
CXCR4-202ENST00000409817 IDI1Q13907 227 aa10.1□□□□□ -0.79
CXCR4-202ENST00000409817 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
CXCR4-202ENST00000409817 TMEM131LA2VDJ0 1609 aa10.1□□□□□ -0.79
CXCR4-202ENST00000409817 TIE1P35590 1138 aa10.1□□□□□ -0.79
CXCR4-202ENST00000409817 CAMK2BQ13554 666 aa10.1□□□□□ -0.79
CXCR4-202ENST00000409817 DDX27Q96GQ7 796 aaKnown RBP10.1□□□□□ -0.79
CXCR4-202ENST00000409817 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
CXCR4-202ENST00000409817 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
CXCR4-202ENST00000409817 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
CXCR4-202ENST00000409817 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
CXCR4-202ENST00000409817 BMP2KQ9NSY1 1161 aaPredicted RBP10.09□□□□□ -0.79
CXCR4-202ENST00000409817 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
CXCR4-202ENST00000409817 SPATA31D1Q6ZQQ2 1576 aa10.09□□□□□ -0.79
CXCR4-202ENST00000409817 ZC3H15Q8WU90 426 aaKnown RBP10.08□□□□□ -0.8
CXCR4-202ENST00000409817 MYOM1P52179 1685 aa10.08□□□□□ -0.8
CXCR4-202ENST00000409817 ASXL1Q8IXJ9 1541 aa10.08□□□□□ -0.8
CXCR4-202ENST00000409817 CLTCQ00610 1675 aaKnown RBP10.07□□□□□ -0.8
CXCR4-202ENST00000409817 ERICH6BQ5W0A0 696 aa10.06□□□□□ -0.8
CXCR4-202ENST00000409817 QRICH2Q9H0J4 1663 aa10.06□□□□□ -0.8
CXCR4-202ENST00000409817 SMG6Q86US8 1419 aaKnown RBP10.05□□□□□ -0.8
CXCR4-202ENST00000409817 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 ARHGEF28Q8N1W1 1705 aaKnown RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 MYO5BQ9ULV0 1848 aa10.04□□□□□ -0.8
CXCR4-202ENST00000409817 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 CNGB1Q14028 1251 aaPredicted RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 ESF1Q9H501 851 aaKnown RBP10.04□□□□□ -0.8
CXCR4-202ENST00000409817 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
CXCR4-202ENST00000409817 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
CXCR4-202ENST00000409817 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
CXCR4-202ENST00000409817 NINLQ9Y2I6 1382 aa10.03□□□□□ -0.8
CXCR4-202ENST00000409817 EVC2Q86UK5 1308 aa10.02□□□□□ -0.8
CXCR4-202ENST00000409817 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.8
CXCR4-202ENST00000409817 A2ML1A8K2U0 1454 aa10.02□□□□□ -0.81
CXCR4-202ENST00000409817 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
CXCR4-202ENST00000409817 PDE3BQ13370 1112 aa10.02□□□□□ -0.81
CXCR4-202ENST00000409817 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
CXCR4-202ENST00000409817 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
CXCR4-202ENST00000409817 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
CXCR4-202ENST00000409817 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
CXCR4-202ENST00000409817 NUDCQ9Y266 331 aa10.01□□□□□ -0.81
CXCR4-202ENST00000409817 USP32Q8NFA0 1604 aa10.01□□□□□ -0.81
CXCR4-202ENST00000409817 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
CXCR4-202ENST00000409817 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
CXCR4-202ENST00000409817 PPP2R1AP30153 589 aa10□□□□□ -0.81
CXCR4-202ENST00000409817 HDGFP51858 240 aaKnown RBP10□□□□□ -0.81
CXCR4-202ENST00000409817 EVX2Q03828 476 aa10□□□□□ -0.81
CXCR4-202ENST00000409817 ALKQ9UM73 1620 aa10□□□□□ -0.81
CXCR4-202ENST00000409817 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
CXCR4-202ENST00000409817 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
CXCR4-202ENST00000409817 DLC1Q96QB1 1528 aa9.99□□□□□ -0.81
CXCR4-202ENST00000409817 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
CXCR4-202ENST00000409817 RIMS2Q9UQ26 1411 aa9.99□□□□□ -0.81
CXCR4-202ENST00000409817 NSD2O96028 1365 aa9.98□□□□□ -0.81
CXCR4-202ENST00000409817 PTPRMP28827 1452 aa9.98□□□□□ -0.81
CXCR4-202ENST00000409817 TULP4Q9NRJ4 1543 aa9.98□□□□□ -0.81
CXCR4-202ENST00000409817 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
CXCR4-202ENST00000409817 ATAD2Q6PL18 1390 aa9.98□□□□□ -0.81
CXCR4-202ENST00000409817 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 TNRQ92752 1358 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 ZMYND10O75800 440 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 MLLT3P42568 568 aaPredicted RBP9.97□□□□□ -0.81
CXCR4-202ENST00000409817 MLECQ14165 292 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 NUTM2DQ5VT03 806 aaPredicted RBP9.97□□□□□ -0.81
CXCR4-202ENST00000409817 CARD14Q9BXL6 1004 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
CXCR4-202ENST00000409817 DSG2Q14126 1118 aa9.96□□□□□ -0.81
CXCR4-202ENST00000409817 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.81
CXCR4-202ENST00000409817 MICALL2Q8IY33 904 aa9.96□□□□□ -0.81
CXCR4-202ENST00000409817 RNF123Q5XPI4 1314 aa9.96□□□□□ -0.82
CXCR4-202ENST00000409817 NGEFQ8N5V2 710 aa9.96□□□□□ -0.82
CXCR4-202ENST00000409817 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
CXCR4-202ENST00000409817 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
CXCR4-202ENST00000409817 NLRP1Q9C000 1473 aa9.95□□□□□ -0.82
CXCR4-202ENST00000409817 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
CXCR4-202ENST00000409817 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
CXCR4-202ENST00000409817 SETD1AO15047 1707 aaKnown RBP9.95□□□□□ -0.82
CXCR4-202ENST00000409817 POLR3AO14802 1390 aaPredicted RBP9.94□□□□□ -0.82
CXCR4-202ENST00000409817 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
CXCR4-202ENST00000409817 SLC12A5Q9H2X9 1139 aa9.94□□□□□ -0.82
CXCR4-202ENST00000409817 POGKQ9P215 609 aa9.94□□□□□ -0.82
CXCR4-202ENST00000409817 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
CXCR4-202ENST00000409817 IRX5P78411 483 aaPredicted RBP9.93□□□□□ -0.82
CXCR4-202ENST00000409817 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
CXCR4-202ENST00000409817 UBR1Q8IWV7 1749 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 DPYSL4O14531 572 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
CXCR4-202ENST00000409817 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 STK26Q9P289 416 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 ADAMTS8Q9UP79 889 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 TMEM2Q9UHN6 1383 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 NRXN3Q9Y4C0 1643 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 TECPR2O15040 1411 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 KNDC1Q76NI1 1749 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 MED14O60244 1454 aa9.92□□□□□ -0.82
CXCR4-202ENST00000409817 SRPK2P78362 688 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms