RNA–Protein interactions for RNA: ENST00000409673.7

SCRN3-202, Transcript of secernin 3, humanhuman

TSL 2 BASIC

Gene SCRN3, Length 1,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-202ENST00000409673 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
SCRN3-202ENST00000409673 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
SCRN3-202ENST00000409673 CLTCQ00610 1675 aaKnown RBP13.42□□□□□ -0.26
SCRN3-202ENST00000409673 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
SCRN3-202ENST00000409673 MCM4P33991 863 aa13.42□□□□□ -0.26
SCRN3-202ENST00000409673 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
SCRN3-202ENST00000409673 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
SCRN3-202ENST00000409673 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
SCRN3-202ENST00000409673 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
SCRN3-202ENST00000409673 GOLGA6L3A6NEY3 463 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
SCRN3-202ENST00000409673 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
SCRN3-202ENST00000409673 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 MTHFSP49914 203 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 DZIP1LQ8IYY4 767 aaKnown RBP13.4□□□□□ -0.26
SCRN3-202ENST00000409673 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 C3P01024 1663 aa13.4□□□□□ -0.26
SCRN3-202ENST00000409673 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.27
SCRN3-202ENST00000409673 SLC12A5Q9H2X9 1139 aa13.39□□□□□ -0.27
SCRN3-202ENST00000409673 C14orf93Q9H972 538 aaKnown RBP13.39□□□□□ -0.27
SCRN3-202ENST00000409673 COL3A1P02461 1466 aaPredicted RBP13.39□□□□□ -0.27
SCRN3-202ENST00000409673 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCRN3-202ENST00000409673 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
SCRN3-202ENST00000409673 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
SCRN3-202ENST00000409673 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
SCRN3-202ENST00000409673 PIK3C2BO00750 1634 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 SMC5Q8IY18 1101 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
SCRN3-202ENST00000409673 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
SCRN3-202ENST00000409673 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 ABCC3O15438 1527 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 NPATQ14207 1427 aa13.36□□□□□ -0.27
SCRN3-202ENST00000409673 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
SCRN3-202ENST00000409673 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 IL16Q14005 1332 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 TRAK2O60296 914 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 TRIM27P14373 513 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 DDIT3P35638 169 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
SCRN3-202ENST00000409673 TNRQ92752 1358 aa13.34□□□□□ -0.27
SCRN3-202ENST00000409673 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
SCRN3-202ENST00000409673 MRE11P49959 708 aa13.34□□□□□ -0.27
SCRN3-202ENST00000409673 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCRN3-202ENST00000409673 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
SCRN3-202ENST00000409673 CLCN1P35523 988 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.28
SCRN3-202ENST00000409673 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
SCRN3-202ENST00000409673 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 SNX21Q969T3 373 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 MED14O60244 1454 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
SCRN3-202ENST00000409673 PLEKHF1Q96S99 279 aa13.32□□□□□ -0.28
SCRN3-202ENST00000409673 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
SCRN3-202ENST00000409673 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
SCRN3-202ENST00000409673 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
SCRN3-202ENST00000409673 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
SCRN3-202ENST00000409673 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
SCRN3-202ENST00000409673 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
SCRN3-202ENST00000409673 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
SCRN3-202ENST00000409673 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
SCRN3-202ENST00000409673 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
SCRN3-202ENST00000409673 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
SCRN3-202ENST00000409673 CIZ1Q9ULV3 898 aaPredicted RBP13.31□□□□□ -0.28
SCRN3-202ENST00000409673 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
SCRN3-202ENST00000409673 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
SCRN3-202ENST00000409673 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
SCRN3-202ENST00000409673 ZBTB40Q9NUA8 1239 aa13.3□□□□□ -0.28
SCRN3-202ENST00000409673 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
SCRN3-202ENST00000409673 SETD1BQ9UPS6 1966 aaKnown RBP13.3□□□□□ -0.28
SCRN3-202ENST00000409673 NUCB1Q02818 461 aa13.3□□□□□ -0.28
SCRN3-202ENST00000409673 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
SCRN3-202ENST00000409673 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
SCRN3-202ENST00000409673 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
SCRN3-202ENST00000409673 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
SCRN3-202ENST00000409673 A0A1W2PP64 1363 aa13.29□□□□□ -0.28
SCRN3-202ENST00000409673 PREX1Q8TCU6 1659 aa13.29□□□□□ -0.28
SCRN3-202ENST00000409673 IDI1Q13907 227 aa13.28□□□□□ -0.28
SCRN3-202ENST00000409673 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
SCRN3-202ENST00000409673 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
SCRN3-202ENST00000409673 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
SCRN3-202ENST00000409673 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.28
SCRN3-202ENST00000409673 PTMSP20962 102 aa13.27□□□□□ -0.28
SCRN3-202ENST00000409673 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.28
SCRN3-202ENST00000409673 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.28
SCRN3-202ENST00000409673 PPIP5K1Q6PFW1 1433 aa13.27□□□□□ -0.28
SCRN3-202ENST00000409673 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
SCRN3-202ENST00000409673 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
SCRN3-202ENST00000409673 ARXQ96QS3 562 aa13.27□□□□□ -0.29
SCRN3-202ENST00000409673 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
SCRN3-202ENST00000409673 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
SCRN3-202ENST00000409673 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
SCRN3-202ENST00000409673 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms