RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FBXO31Q5XUX0 539 aaPredicted RBP20.55■□□□□ 0.88
PCDHA13-202ENST00000409494 CABP4P57796 275 aa20.54■□□□□ 0.88
PCDHA13-202ENST00000409494 CADPS2Q86UW7 1296 aa20.54■□□□□ 0.88
PCDHA13-202ENST00000409494 STRN4Q9NRL3 753 aa20.54■□□□□ 0.88
PCDHA13-202ENST00000409494 ERC1Q8IUD2 1116 aa20.53■□□□□ 0.88
PCDHA13-202ENST00000409494 NECTIN2Q92692 538 aa20.53■□□□□ 0.88
PCDHA13-202ENST00000409494 NOS1P29475 1434 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 TPM4P67936 248 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 GSE1Q14687 1217 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 RBM33Q96EV2 1170 aaKnown RBP20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 ADGRF5Q8IZF2 1346 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 AKAP17AQ02040 695 aaKnown RBP20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 AMOTQ4VCS5 1084 aa20.52■□□□□ 0.88
PCDHA13-202ENST00000409494 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
PCDHA13-202ENST00000409494 SYCP2Q9BX26 1530 aa20.5■□□□□ 0.87
PCDHA13-202ENST00000409494 INTS3Q68E01 1043 aaKnown RBP20.5■□□□□ 0.87
PCDHA13-202ENST00000409494 TRDNQ13061 729 aa20.5■□□□□ 0.87
PCDHA13-202ENST00000409494 CLASRPQ8N2M8 674 aaKnown RBP20.5■□□□□ 0.87
PCDHA13-202ENST00000409494 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
PCDHA13-202ENST00000409494 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
PCDHA13-202ENST00000409494 EXOSC9Q06265 439 aaKnown RBP20.49■□□□□ 0.87
PCDHA13-202ENST00000409494 TRIM34Q9BYJ4 488 aa20.49■□□□□ 0.87
PCDHA13-202ENST00000409494 SF3B2Q13435 895 aaKnown RBP20.49■□□□□ 0.87
PCDHA13-202ENST00000409494 WAPLQ7Z5K2 1190 aa20.48■□□□□ 0.87
PCDHA13-202ENST00000409494 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
PCDHA13-202ENST00000409494 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
PCDHA13-202ENST00000409494 TTC21BQ7Z4L5 1316 aa20.46■□□□□ 0.87
PCDHA13-202ENST00000409494 GCC1Q96CN9 775 aa20.46■□□□□ 0.87
PCDHA13-202ENST00000409494 PHF14O94880 888 aa20.46■□□□□ 0.87
PCDHA13-202ENST00000409494 HIP1O00291 1037 aa20.46■□□□□ 0.87
PCDHA13-202ENST00000409494 CHAF1AQ13111 956 aaPredicted RBP20.45■□□□□ 0.87
PCDHA13-202ENST00000409494 FAM184AQ8NB25 1140 aa20.45■□□□□ 0.87
PCDHA13-202ENST00000409494 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.87
PCDHA13-202ENST00000409494 CCDC184Q52MB2 194 aa20.45■□□□□ 0.86
PCDHA13-202ENST00000409494 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
PCDHA13-202ENST00000409494 TULP1O00294 542 aaPredicted RBP20.45■□□□□ 0.86
PCDHA13-202ENST00000409494 GNAI2P04899 355 aa20.44■□□□□ 0.86
PCDHA13-202ENST00000409494 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
PCDHA13-202ENST00000409494 CDCA7LQ96GN5 454 aa20.43■□□□□ 0.86
PCDHA13-202ENST00000409494 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
PCDHA13-202ENST00000409494 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
PCDHA13-202ENST00000409494 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
PCDHA13-202ENST00000409494 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
PCDHA13-202ENST00000409494 SF3A1Q15459 793 aaKnown RBP20.42■□□□□ 0.86
PCDHA13-202ENST00000409494 SRCIN1Q9C0H9 1055 aa20.42■□□□□ 0.86
PCDHA13-202ENST00000409494 H3BQV1 296 aa20.41■□□□□ 0.86
PCDHA13-202ENST00000409494 IFFO2Q5TF58 517 aa20.41■□□□□ 0.86
PCDHA13-202ENST00000409494 DDX11L8A8MPP1 907 aa20.41■□□□□ 0.86
PCDHA13-202ENST00000409494 TBC1D2BQ9UPU7 963 aa20.41■□□□□ 0.86
PCDHA13-202ENST00000409494 NUTM2BA6NNL0 878 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 NUTM2EB1AL46 878 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 MARCH6O60337 910 aa20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 NUTM2AQ8IVF1 878 aaPredicted RBP20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 RASSF8Q8NHQ8 419 aa20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
PCDHA13-202ENST00000409494 ERICH2A1L162 156 aa20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 APPP05067 770 aa20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 TMPOP42166 694 aaKnown RBP20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 DRC7Q8IY82 874 aa20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 CNTROBQ8N137 903 aa20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 MSH6P52701 1360 aa20.39■□□□□ 0.86
PCDHA13-202ENST00000409494 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
PCDHA13-202ENST00000409494 TRIM29Q14134 588 aa20.39■□□□□ 0.85
PCDHA13-202ENST00000409494 RRS1Q15050 365 aaKnown RBP20.39■□□□□ 0.85
PCDHA13-202ENST00000409494 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
PCDHA13-202ENST00000409494 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.85
PCDHA13-202ENST00000409494 NEUROD6Q96NK8 337 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 CDC45O75419 566 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 SURF6O75683 361 aaKnown RBP20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 STARD3NLO95772 234 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 ZC3H6P61129 1189 aaKnown RBP20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 PANK1Q8TE04 598 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 NEO1Q92859 1461 aa20.38■□□□□ 0.85
PCDHA13-202ENST00000409494 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 BTBD11A6QL63 1104 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 CPLX1O14810 134 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 SKOR2Q2VWA4 1001 aaPredicted RBP20.37■□□□□ 0.85
PCDHA13-202ENST00000409494 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
PCDHA13-202ENST00000409494 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
PCDHA13-202ENST00000409494 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
PCDHA13-202ENST00000409494 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
PCDHA13-202ENST00000409494 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 ATP10AO60312 1499 aa20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 RALYLQ86SE5 291 aaKnown RBP20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 PSMA5P28066 241 aa20.35■□□□□ 0.85
PCDHA13-202ENST00000409494 EIF2AK4Q9P2K8 1649 aaKnown RBP20.34■□□□□ 0.85
PCDHA13-202ENST00000409494 FOXO3O43524 673 aa20.34■□□□□ 0.85
PCDHA13-202ENST00000409494 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
PCDHA13-202ENST00000409494 PIP4K2BP78356 416 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms