RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PHF23Q9BUL5 403 aaPredicted RBP7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 TMEM51Q9NW97 253 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 TNNQ9UQP3 1299 aa7.18□□□□□ -1.26
R3HDM1-202ENST00000409478 CFAP74Q9C0B2 1584 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 CYP2E1P05181 493 aaPredicted RBP7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 MYOM1P52179 1685 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 REREQ9P2R6 1566 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 MBD3O95983 291 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 ARHGEF5Q12774 1597 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 CD2BP2O95400 341 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 RABEP1Q15276 862 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 PDCL2Q8N4E4 241 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 FEZ1Q99689 392 aa7.17□□□□□ -1.26
R3HDM1-202ENST00000409478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.17□□□□□ -1.261e-6■■■□□ 16.9
R3HDM1-202ENST00000409478 CDK11BP21127 795 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 ATP2B3Q16720 1220 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 BCL2L13Q9BXK5 485 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 CARMIL2Q6F5E8 1435 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 SCAF11Q99590 1463 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 ADAMTS12P58397 1594 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 ATP10AO60312 1499 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 PLA2R1Q13018 1463 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 KDM5AP29375 1690 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 CHD1LQ86WJ1 897 aa7.16□□□□□ -1.26
R3HDM1-202ENST00000409478 SYAP1Q96A49 352 aaPredicted RBP7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 YEATS2Q9ULM3 1422 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 MAGI1Q96QZ7 1491 aaPredicted RBP7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 DISP1Q96F81 1524 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 UNC13BO14795 1591 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 CHAF1AQ13111 956 aaPredicted RBP7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 ITPRIPQ8IWB1 547 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 GPT2Q8TD30 523 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 DIAPH3Q9NSV4 1193 aa7.15□□□□□ -1.26
R3HDM1-202ENST00000409478 SYCE3A1L190 88 aa7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 UVSSAQ2YD98 709 aa7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 FAM184AQ8NB25 1140 aa7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 TSPY26PQ9H489 355 aa7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 PHF14O94880 888 aa7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 GABPB1Q06547 395 aaPredicted RBP7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 FKBP5Q13451 457 aaPredicted RBP7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 CHMP4BQ9H444 224 aaKnown RBP7.15□□□□□ -1.27
R3HDM1-202ENST00000409478 ZNF771Q7L3S4 317 aaPredicted RBP7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 TCP11L2Q8N4U5 519 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 JPH4Q96JJ6 628 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 BCL2L12Q9HB09 334 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 SPTLC3Q9NUV7 552 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 OGFRQ9NZT2 677 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 ATF7IPQ6VMQ6 1270 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 GCC1Q96CN9 775 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 TMEM63CQ9P1W3 806 aa7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 RBM27Q9P2N5 1060 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-202ENST00000409478 MADDQ8WXG6 1647 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 TTC37Q6PGP7 1564 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 CCDC66A2RUB6 948 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 NPM1P06748 294 aaKnown RBP eCLIP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 TRIM27P14373 513 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 ANKRD7Q92527 254 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 SMC4Q9NTJ3 1288 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 SHPRHQ149N8 1683 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 CDC45O75419 566 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 ZBTB40Q9NUA8 1239 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 CGNQ9P2M7 1197 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 ADGRL1O94910 1474 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 SLC20A2Q08357 652 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 RSPH4AQ5TD94 716 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 OSCARQ8IYS5 282 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 RBM42Q9BTD8 480 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 TARBP1Q13395 1621 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 IQGAP3Q86VI3 1631 aa7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 VGFO15240 615 aaPredicted RBP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 IPO8O15397 1037 aaKnown RBP7.13□□□□□ -1.27
R3HDM1-202ENST00000409478 UHRF1BP1LA0JNW5 1464 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 ST18O60284 1047 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 TPM3P06753 285 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 RRP7AQ9Y3A4 280 aaKnown RBP7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 CEP152O94986 1710 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 SYCP1Q15431 976 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 RNF214Q8ND24 703 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 DUOX2Q9NRD8 1548 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 SPDYE4A6NLX3 237 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 PLPPR3Q6T4P5 718 aa7.12□□□□□ -1.27
R3HDM1-202ENST00000409478 CLTCL1P53675 1640 aa7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 CTIFO43310 598 aaKnown RBP7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 TSC1Q92574 1164 aa7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 DNAJC2Q99543 621 aaKnown RBP7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 ABCC11Q96J66 1382 aa7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
R3HDM1-202ENST00000409478 U2AF2P26368 475 aaKnown RBP eCLIP7.1□□□□□ -1.275e-7■■□□□ 12.9
R3HDM1-202ENST00000409478 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 FAM193AP78312 1265 aa7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 TMEM57Q8N5G2 664 aa7.1□□□□□ -1.27
R3HDM1-202ENST00000409478 ANKRD45Q5TZF3 282 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms