RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 COL22A1Q8NFW1 1626 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-203ENST00000409254 NUTM2FA1L443 756 aa17.92■□□□□ 0.46
LIMS2-203ENST00000409254 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
LIMS2-203ENST00000409254 ORAI2Q96SN7 254 aa17.92■□□□□ 0.46
LIMS2-203ENST00000409254 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
LIMS2-203ENST00000409254 SHPRHQ149N8 1683 aa17.91■□□□□ 0.46
LIMS2-203ENST00000409254 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
LIMS2-203ENST00000409254 SOS2Q07890 1332 aaPredicted RBP17.91■□□□□ 0.46
LIMS2-203ENST00000409254 PSME1Q06323 249 aa17.9■□□□□ 0.46
LIMS2-203ENST00000409254 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
LIMS2-203ENST00000409254 CGNL1Q0VF96 1302 aa17.9■□□□□ 0.46
LIMS2-203ENST00000409254 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.46
LIMS2-203ENST00000409254 ABCA3Q99758 1704 aa17.89■□□□□ 0.46
LIMS2-203ENST00000409254 SOCS7O14512 581 aa17.89■□□□□ 0.45
LIMS2-203ENST00000409254 PANK3Q9H999 370 aa17.89■□□□□ 0.45
LIMS2-203ENST00000409254 ARHGEF10O15013 1369 aa17.89■□□□□ 0.45
LIMS2-203ENST00000409254 PER1O15534 1290 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-203ENST00000409254 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
LIMS2-203ENST00000409254 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
LIMS2-203ENST00000409254 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
LIMS2-203ENST00000409254 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
LIMS2-203ENST00000409254 FOXO3O43524 673 aa17.86■□□□□ 0.45
LIMS2-203ENST00000409254 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
LIMS2-203ENST00000409254 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
LIMS2-203ENST00000409254 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
LIMS2-203ENST00000409254 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
LIMS2-203ENST00000409254 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
LIMS2-203ENST00000409254 SLIT3O75094 1523 aa17.84■□□□□ 0.45
LIMS2-203ENST00000409254 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-203ENST00000409254 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
LIMS2-203ENST00000409254 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
LIMS2-203ENST00000409254 ABCC6O95255 1503 aa17.82■□□□□ 0.44
LIMS2-203ENST00000409254 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
LIMS2-203ENST00000409254 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
LIMS2-203ENST00000409254 LTN1O94822 1766 aa17.81■□□□□ 0.44
LIMS2-203ENST00000409254 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
LIMS2-203ENST00000409254 USP19O94966 1318 aa17.79■□□□□ 0.44
LIMS2-203ENST00000409254 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
LIMS2-203ENST00000409254 FYB1O15117 783 aa17.78■□□□□ 0.44
LIMS2-203ENST00000409254 NFAT5O94916 1531 aa17.77■□□□□ 0.44
LIMS2-203ENST00000409254 PIP4K2BP78356 416 aa17.77■□□□□ 0.44
LIMS2-203ENST00000409254 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
LIMS2-203ENST00000409254 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
LIMS2-203ENST00000409254 KIF24Q5T7B8 1368 aa17.76■□□□□ 0.43
LIMS2-203ENST00000409254 PNPLA6Q8IY17 1366 aa17.76■□□□□ 0.43
LIMS2-203ENST00000409254 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
LIMS2-203ENST00000409254 ABTB2Q8N961 1025 aa17.75■□□□□ 0.43
LIMS2-203ENST00000409254 COG3Q96JB2 828 aa17.75■□□□□ 0.43
LIMS2-203ENST00000409254 JCADQ9P266 1359 aa17.75■□□□□ 0.43
LIMS2-203ENST00000409254 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-203ENST00000409254 RALBP1Q15311 655 aa17.74■□□□□ 0.43
LIMS2-203ENST00000409254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
LIMS2-203ENST00000409254 KCNH5Q8NCM2 988 aa17.73■□□□□ 0.43
LIMS2-203ENST00000409254 FAM208AQ9UK61 1670 aaKnown RBP17.73■□□□□ 0.43
LIMS2-203ENST00000409254 NME9Q86XW9 330 aa17.72■□□□□ 0.43
LIMS2-203ENST00000409254 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
LIMS2-203ENST00000409254 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
LIMS2-203ENST00000409254 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
LIMS2-203ENST00000409254 CPDO75976 1380 aa17.71■□□□□ 0.43
LIMS2-203ENST00000409254 NLRP6P59044 892 aa17.71■□□□□ 0.43
LIMS2-203ENST00000409254 XPCQ01831 940 aaPredicted RBP17.71■□□□□ 0.43
LIMS2-203ENST00000409254 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
LIMS2-203ENST00000409254 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
LIMS2-203ENST00000409254 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
LIMS2-203ENST00000409254 COL18A1P39060 1754 aa17.7■□□□□ 0.42
LIMS2-203ENST00000409254 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
LIMS2-203ENST00000409254 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
LIMS2-203ENST00000409254 GGNBP2Q9H3C7 697 aa17.69■□□□□ 0.42
LIMS2-203ENST00000409254 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-203ENST00000409254 ANP32CO43423 234 aa17.68■□□□□ 0.42
LIMS2-203ENST00000409254 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
LIMS2-203ENST00000409254 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
LIMS2-203ENST00000409254 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
LIMS2-203ENST00000409254 PLCH1Q4KWH8 1693 aa17.66■□□□□ 0.42
LIMS2-203ENST00000409254 PEAK1Q9H792 1746 aa17.66■□□□□ 0.42
LIMS2-203ENST00000409254 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
LIMS2-203ENST00000409254 INSRP06213 1382 aa17.66■□□□□ 0.42
LIMS2-203ENST00000409254 GCP02774 474 aa17.65■□□□□ 0.42
LIMS2-203ENST00000409254 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
LIMS2-203ENST00000409254 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.42
LIMS2-203ENST00000409254 HSPA1LP34931 641 aa17.64■□□□□ 0.41
LIMS2-203ENST00000409254 LMOD2Q6P5Q4 547 aa17.64■□□□□ 0.41
LIMS2-203ENST00000409254 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
LIMS2-203ENST00000409254 FLT4P35916 1363 aa17.63■□□□□ 0.41
LIMS2-203ENST00000409254 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
LIMS2-203ENST00000409254 ZRANB1Q9UGI0 708 aa17.61■□□□□ 0.41
LIMS2-203ENST00000409254 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
LIMS2-203ENST00000409254 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-203ENST00000409254 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
LIMS2-203ENST00000409254 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
LIMS2-203ENST00000409254 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
LIMS2-203ENST00000409254 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.4
LIMS2-203ENST00000409254 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
LIMS2-203ENST00000409254 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
LIMS2-203ENST00000409254 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
LIMS2-203ENST00000409254 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
LIMS2-203ENST00000409254 PLEKHG2Q9H7P9 1386 aa17.56■□□□□ 0.4
LIMS2-203ENST00000409254 LRP6O75581 1613 aa17.56■□□□□ 0.4
LIMS2-203ENST00000409254 IP6K1Q92551 441 aa17.55■□□□□ 0.4
LIMS2-203ENST00000409254 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms