RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FEZ1Q99689 392 aa14.4□□□□□ -0.1
SHANK2-203ENST00000409161 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
SHANK2-203ENST00000409161 UQCRHLA0A096LP55 91 aa14.4□□□□□ -0.1
SHANK2-203ENST00000409161 SERPINC1P01008 464 aa14.4□□□□□ -0.1
SHANK2-203ENST00000409161 UQCRHP07919 91 aa14.4□□□□□ -0.1
SHANK2-203ENST00000409161 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
SHANK2-203ENST00000409161 DIAPH1O60610 1272 aaKnown RBP14.4□□□□□ -0.1
SHANK2-203ENST00000409161 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.1
SHANK2-203ENST00000409161 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
SHANK2-203ENST00000409161 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
SHANK2-203ENST00000409161 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
SHANK2-203ENST00000409161 CIZ1Q9ULV3 898 aaPredicted RBP14.39□□□□□ -0.11
SHANK2-203ENST00000409161 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
SHANK2-203ENST00000409161 CFAP45Q9UL16 551 aa14.39□□□□□ -0.11
SHANK2-203ENST00000409161 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
SHANK2-203ENST00000409161 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
SHANK2-203ENST00000409161 TBC1D2BQ9UPU7 963 aa14.38□□□□□ -0.11
SHANK2-203ENST00000409161 CCDC7Q96M83 1385 aa14.38□□□□□ -0.11
SHANK2-203ENST00000409161 MICALCLQ6ZW33 695 aa14.38□□□□□ -0.11
SHANK2-203ENST00000409161 KIF3BO15066 747 aa14.37□□□□□ -0.11
SHANK2-203ENST00000409161 RIPK4P57078 832 aa14.37□□□□□ -0.11
SHANK2-203ENST00000409161 RNF214Q8ND24 703 aa14.37□□□□□ -0.11
SHANK2-203ENST00000409161 KRT85P78386 507 aa14.37□□□□□ -0.11
SHANK2-203ENST00000409161 CDKL5O76039 1030 aa14.37□□□□□ -0.11
SHANK2-203ENST00000409161 SPATA24Q86W54 205 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
SHANK2-203ENST00000409161 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
SHANK2-203ENST00000409161 STK38Q15208 465 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 TRIM21P19474 475 aaKnown RBP14.36□□□□□ -0.11
SHANK2-203ENST00000409161 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
SHANK2-203ENST00000409161 GNAI3P08754 354 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 GRPEL1Q9HAV7 217 aa14.36□□□□□ -0.11
SHANK2-203ENST00000409161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.35□□□□□ -0.11
SHANK2-203ENST00000409161 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 GCC1Q96CN9 775 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
SHANK2-203ENST00000409161 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 CRACR2AQ9BSW2 395 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
SHANK2-203ENST00000409161 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
SHANK2-203ENST00000409161 LNPKQ9C0E8 428 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 STAMBPO95630 424 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 ANKRD62A6NC57 917 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 ZNF397Q8NF99 534 aaPredicted RBP14.35□□□□□ -0.11
SHANK2-203ENST00000409161 CENPHQ9H3R5 247 aa14.35□□□□□ -0.11
SHANK2-203ENST00000409161 PPM1EQ8WY54 764 aa14.34□□□□□ -0.11
SHANK2-203ENST00000409161 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
SHANK2-203ENST00000409161 CEP57L1Q8IYX8 460 aa14.34□□□□□ -0.11
SHANK2-203ENST00000409161 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
SHANK2-203ENST00000409161 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
SHANK2-203ENST00000409161 KRT18P05783 430 aaKnown RBP14.34□□□□□ -0.11
SHANK2-203ENST00000409161 DNAI2Q9GZS0 605 aa14.34□□□□□ -0.11
SHANK2-203ENST00000409161 NF2P35240 595 aa14.33□□□□□ -0.11
SHANK2-203ENST00000409161 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.11
SHANK2-203ENST00000409161 EVA1CP58658 441 aa14.33□□□□□ -0.12
SHANK2-203ENST00000409161 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHANK2-203ENST00000409161 APAF1O14727 1248 aa14.33□□□□□ -0.12
SHANK2-203ENST00000409161 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
SHANK2-203ENST00000409161 SPC24Q8NBT2 197 aa14.33□□□□□ -0.12
SHANK2-203ENST00000409161 WASHC4Q2M389 1173 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 UBXN4Q92575 508 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 TAX1BP1Q86VP1 789 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 TMCO3Q6UWJ1 677 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
SHANK2-203ENST00000409161 CCDC102AQ96A19 550 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 PLEKHH1Q9ULM0 1364 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 KIF21BO75037 1637 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 CETN2P41208 172 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
SHANK2-203ENST00000409161 ESPNB1AK53 854 aa14.31□□□□□ -0.12
SHANK2-203ENST00000409161 NEK4P51957 841 aa14.31□□□□□ -0.12
SHANK2-203ENST00000409161 PAF1Q8N7H5 531 aa14.31□□□□□ -0.12
SHANK2-203ENST00000409161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■■□ 20.4
SHANK2-203ENST00000409161 SMG6Q86US8 1419 aaKnown RBP14.31□□□□□ -0.12
SHANK2-203ENST00000409161 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
SHANK2-203ENST00000409161 FIBPO43427 364 aa14.31□□□□□ -0.12
SHANK2-203ENST00000409161 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
SHANK2-203ENST00000409161 CGNQ9P2M7 1197 aaKnown RBP14.31□□□□□ -0.12
SHANK2-203ENST00000409161 EPB41L2O43491 1005 aaKnown RBP14.31□□□□□ -0.12
SHANK2-203ENST00000409161 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-203ENST00000409161 ME1P48163 572 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 SKIDA1Q1XH10 827 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 TRAK1Q9UPV9 953 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 LRRFIP2Q9Y608 721 aaKnown RBP14.3□□□□□ -0.12
SHANK2-203ENST00000409161 FOSBP53539 338 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 MAP2K1Q02750 393 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-203ENST00000409161 ZSCAN30Q86W11 494 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-203ENST00000409161 KIF18AQ8NI77 898 aa14.3□□□□□ -0.12
SHANK2-203ENST00000409161 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 TMEM132AQ24JP5 1023 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms