RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 PAK3O75914 559 aaPredicted RBP32.46■■■□□ 2.79
KDELR3-202ENST00000409006 NRAPQ86VF7 1730 aa32.46■■■□□ 2.79
KDELR3-202ENST00000409006 ATAD2Q6PL18 1390 aa32.45■■■□□ 2.79
KDELR3-202ENST00000409006 CENPJQ9HC77 1338 aaPredicted RBP32.44■■■□□ 2.78
KDELR3-202ENST00000409006 CCDC61Q9Y6R9 512 aa32.43■■■□□ 2.78
KDELR3-202ENST00000409006 COL14A1Q05707 1796 aaKnown RBP32.41■■■□□ 2.78
KDELR3-202ENST00000409006 VPS72Q15906 364 aa32.41■■■□□ 2.78
KDELR3-202ENST00000409006 ACEP12821 1306 aa32.41■■■□□ 2.78
KDELR3-202ENST00000409006 POLR3AO14802 1390 aaPredicted RBP32.41■■■□□ 2.78
KDELR3-202ENST00000409006 PHRF1Q9P1Y6 1649 aaKnown RBP32.39■■■□□ 2.78
KDELR3-202ENST00000409006 PLEKHG3A1L390 1219 aa32.38■■■□□ 2.77
KDELR3-202ENST00000409006 NBPF8Q3BBV2 869 aa32.38■■■□□ 2.77
KDELR3-202ENST00000409006 CABP2Q9NPB3 220 aa32.37■■■□□ 2.77
KDELR3-202ENST00000409006 SRPK2P78362 688 aaKnown RBP32.36■■■□□ 2.77
KDELR3-202ENST00000409006 NUTM2GQ5VZR2 741 aa32.35■■■□□ 2.77
KDELR3-202ENST00000409006 BTG4Q9NY30 223 aa32.35■■■□□ 2.77
KDELR3-202ENST00000409006 CCDC9Q9Y3X0 531 aaKnown RBP32.35■■■□□ 2.77
KDELR3-202ENST00000409006 EP400Q96L91 3159 aa32.34■■■□□ 2.77
KDELR3-202ENST00000409006 PPIP5K1Q6PFW1 1433 aa32.34■■■□□ 2.77
KDELR3-202ENST00000409006 SEPT12Q8IYM1 358 aa32.32■■■□□ 2.76
KDELR3-202ENST00000409006 ONECUT3O60422 494 aaPredicted RBP32.3■■■□□ 2.76
KDELR3-202ENST00000409006 ROCK2O75116 1388 aaKnown RBP32.3■■■□□ 2.76
KDELR3-202ENST00000409006 PRDM11Q9NQV5 511 aa32.27■■■□□ 2.76
KDELR3-202ENST00000409006 KIAA0232Q92628 1395 aa32.27■■■□□ 2.76
KDELR3-202ENST00000409006 NRKQ7Z2Y5 1582 aa32.24■■■□□ 2.75
KDELR3-202ENST00000409006 CHRNA2Q15822 529 aa32.24■■■□□ 2.75
KDELR3-202ENST00000409006 ABTB2Q8N961 1025 aa32.24■■■□□ 2.75
KDELR3-202ENST00000409006 CABP1Q9NZU7 370 aa32.24■■■□□ 2.75
KDELR3-202ENST00000409006 ZC3H6P61129 1189 aaKnown RBP32.23■■■□□ 2.75
KDELR3-202ENST00000409006 FAM98CQ17RN3 349 aaKnown RBP32.22■■■□□ 2.75
KDELR3-202ENST00000409006 SPATA31A5Q5VU36 1347 aa32.2■■■□□ 2.74
KDELR3-202ENST00000409006 EVC2Q86UK5 1308 aa32.2■■■□□ 2.74
KDELR3-202ENST00000409006 SPATA31A7Q8IWB4 1347 aa32.2■■■□□ 2.74
KDELR3-202ENST00000409006 CCDC125Q86Z20 511 aa32.19■■■□□ 2.74
KDELR3-202ENST00000409006 TRIM26Q12899 539 aaPredicted RBP32.17■■■□□ 2.74
KDELR3-202ENST00000409006 KRT27Q7Z3Y8 459 aa32.17■■■□□ 2.74
KDELR3-202ENST00000409006 USP19O94966 1318 aa32.17■■■□□ 2.74
KDELR3-202ENST00000409006 USP6P35125 1406 aa32.17■■■□□ 2.74
KDELR3-202ENST00000409006 A0A0G2JS52 829 aa32.16■■■□□ 2.74
KDELR3-202ENST00000409006 MYT1Q01538 1121 aa32.16■■■□□ 2.74
KDELR3-202ENST00000409006 AKAP12Q02952 1782 aa32.15■■■□□ 2.74
KDELR3-202ENST00000409006 BLMP54132 1417 aaPredicted RBP32.15■■■□□ 2.74
KDELR3-202ENST00000409006 THSD7AQ9UPZ6 1657 aa32.15■■■□□ 2.74
KDELR3-202ENST00000409006 LMO7Q8WWI1 1683 aa32.14■■■□□ 2.74
KDELR3-202ENST00000409006 SSH2Q76I76 1423 aa32.13■■■□□ 2.73
KDELR3-202ENST00000409006 STRN4Q9NRL3 753 aa32.13■■■□□ 2.73
KDELR3-202ENST00000409006 CAMTA1Q9Y6Y1 1673 aa32.13■■■□□ 2.73
KDELR3-202ENST00000409006 PIK3C2AO00443 1686 aa32.12■■■□□ 2.73
KDELR3-202ENST00000409006 TONSLQ96HA7 1378 aa32.12■■■□□ 2.73
KDELR3-202ENST00000409006 NLRP13Q86W25 1043 aa32.12■■■□□ 2.73
KDELR3-202ENST00000409006 BRD4O60885 1362 aaPredicted RBP32.11■■■□□ 2.73
KDELR3-202ENST00000409006 CPDO75976 1380 aa32.1■■■□□ 2.73
KDELR3-202ENST00000409006 SPATA31A1Q5TZJ5 1347 aa32.1■■■□□ 2.73
KDELR3-202ENST00000409006 GCP02774 474 aa32.09■■■□□ 2.73
KDELR3-202ENST00000409006 CARD11Q9BXL7 1154 aa32.09■■■□□ 2.73
KDELR3-202ENST00000409006 DEFB132Q7Z7B7 95 aa32.08■■■□□ 2.73
KDELR3-202ENST00000409006 NLRP6P59044 892 aa32.06■■■□□ 2.72
KDELR3-202ENST00000409006 FAM182BQ5T319 152 aa32.06■■■□□ 2.72
KDELR3-202ENST00000409006 SLIT3O75094 1523 aa32.05■■■□□ 2.72
KDELR3-202ENST00000409006 EVA1CP58658 441 aa32.03■■■□□ 2.72
KDELR3-202ENST00000409006 LARP1Q6PKG0 1096 aaKnown RBP32.03■■■□□ 2.72
KDELR3-202ENST00000409006 USP35Q9P2H5 1018 aa32.03■■■□□ 2.72
KDELR3-202ENST00000409006 SBNO2Q9Y2G9 1366 aa32.03■■■□□ 2.72
KDELR3-202ENST00000409006 CPSF1Q10570 1443 aaKnown RBP32.01■■■□□ 2.72
KDELR3-202ENST00000409006 MON2Q7Z3U7 1717 aa32.01■■■□□ 2.72
KDELR3-202ENST00000409006 TTC21BQ7Z4L5 1316 aa32■■■□□ 2.71
KDELR3-202ENST00000409006 COL18A1P39060 1754 aa32■■■□□ 2.71
KDELR3-202ENST00000409006 ZNF692Q9BU19 519 aaPredicted RBP32■■■□□ 2.71
KDELR3-202ENST00000409006 SF3B2Q13435 895 aaKnown RBP31.99■■■□□ 2.71
KDELR3-202ENST00000409006 ZRANB1Q9UGI0 708 aa31.99■■■□□ 2.71
KDELR3-202ENST00000409006 COL5A2P05997 1499 aaPredicted RBP31.98■■■□□ 2.71
KDELR3-202ENST00000409006 ZBTB7CA1YPR0 619 aa31.98■■■□□ 2.71
KDELR3-202ENST00000409006 RGPD1P0DJD0 1748 aa31.97■■■□□ 2.71
KDELR3-202ENST00000409006 RGPD5Q99666 1765 aa31.97■■■□□ 2.71
KDELR3-202ENST00000409006 TNS1Q9HBL0 1735 aaKnown RBP31.95■■■□□ 2.7
KDELR3-202ENST00000409006 KTN1Q86UP2 1357 aaKnown RBP31.94■■■□□ 2.7
KDELR3-202ENST00000409006 BARGINQ6ZT62 677 aa31.94■■■□□ 2.7
KDELR3-202ENST00000409006 CD163L1Q9NR16 1453 aa31.94■■■□□ 2.7
KDELR3-202ENST00000409006 AATKQ6ZMQ8 1374 aa31.92■■■□□ 2.7
KDELR3-202ENST00000409006 TCP11L2Q8N4U5 519 aa31.91■■■□□ 2.7
KDELR3-202ENST00000409006 TTC21AQ8NDW8 1320 aa31.91■■■□□ 2.7
KDELR3-202ENST00000409006 AXIN2Q9Y2T1 843 aa31.89■■■□□ 2.7
KDELR3-202ENST00000409006 SOX12O15370 315 aa31.88■■■□□ 2.69
KDELR3-202ENST00000409006 SLC12A5Q9H2X9 1139 aa31.88■■■□□ 2.69
KDELR3-202ENST00000409006 PARP4Q9UKK3 1724 aaKnown RBP31.88■■■□□ 2.69
KDELR3-202ENST00000409006 NFAT5O94916 1531 aa31.87■■■□□ 2.69
KDELR3-202ENST00000409006 CRB1P82279 1406 aa31.87■■■□□ 2.69
KDELR3-202ENST00000409006 TMC1Q8TDI8 760 aa31.87■■■□□ 2.69
KDELR3-202ENST00000409006 BAG6P46379 1132 aa31.86■■■□□ 2.69
KDELR3-202ENST00000409006 ARHGEF25Q86VW2 580 aa31.86■■■□□ 2.69
KDELR3-202ENST00000409006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.86■■■□□ 2.69
KDELR3-202ENST00000409006 USP54Q70EL1 1684 aa31.86■■■□□ 2.69
KDELR3-202ENST00000409006 EN1Q05925 392 aaPredicted RBP31.85■■■□□ 2.69
KDELR3-202ENST00000409006 TESK2Q96S53 571 aa31.85■■■□□ 2.69
KDELR3-202ENST00000409006 ST20-MTHFSA0A0A6YYL1 179 aa31.84■■■□□ 2.69
KDELR3-202ENST00000409006 THRAP3Q9Y2W1 955 aaKnown RBP31.84■■■□□ 2.69
KDELR3-202ENST00000409006 FAM196AQ6ZSG2 479 aa31.83■■■□□ 2.69
KDELR3-202ENST00000409006 KCNH5Q8NCM2 988 aa31.83■■■□□ 2.69
KDELR3-202ENST00000409006 WNK3Q9BYP7 1800 aa31.83■■■□□ 2.69
KDELR3-202ENST00000409006 PDE3BQ13370 1112 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms