RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
TCN2-203ENST00000407817 EDC4Q6P2E9 1401 aaKnown RBP15.97■□□□□ 0.15
TCN2-203ENST00000407817 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
TCN2-203ENST00000407817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
TCN2-203ENST00000407817 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
TCN2-203ENST00000407817 MTHFSP49914 203 aa15.96■□□□□ 0.15
TCN2-203ENST00000407817 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
TCN2-203ENST00000407817 DCCP43146 1447 aa15.95■□□□□ 0.14
TCN2-203ENST00000407817 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
TCN2-203ENST00000407817 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
TCN2-203ENST00000407817 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
TCN2-203ENST00000407817 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
TCN2-203ENST00000407817 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
TCN2-203ENST00000407817 ACEP12821 1306 aa15.93■□□□□ 0.14
TCN2-203ENST00000407817 MST1RQ04912 1400 aa15.92■□□□□ 0.14
TCN2-203ENST00000407817 SSH2Q76I76 1423 aa15.92■□□□□ 0.14
TCN2-203ENST00000407817 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
TCN2-203ENST00000407817 FKBP8Q14318 412 aa15.92■□□□□ 0.14
TCN2-203ENST00000407817 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
TCN2-203ENST00000407817 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
TCN2-203ENST00000407817 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
TCN2-203ENST00000407817 USP6P35125 1406 aa15.91■□□□□ 0.14
TCN2-203ENST00000407817 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
TCN2-203ENST00000407817 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
TCN2-203ENST00000407817 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
TCN2-203ENST00000407817 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
TCN2-203ENST00000407817 NME9Q86XW9 330 aa15.88■□□□□ 0.13
TCN2-203ENST00000407817 PIK3C2AO00443 1686 aa15.88■□□□□ 0.13
TCN2-203ENST00000407817 COG3Q96JB2 828 aa15.88■□□□□ 0.13
TCN2-203ENST00000407817 MSH6P52701 1360 aa15.88■□□□□ 0.13
TCN2-203ENST00000407817 MAP2P11137 1827 aaKnown RBP15.87■□□□□ 0.13
TCN2-203ENST00000407817 PHF8Q9UPP1 1060 aa15.87■□□□□ 0.13
TCN2-203ENST00000407817 USP54Q70EL1 1684 aa15.87■□□□□ 0.13
TCN2-203ENST00000407817 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
TCN2-203ENST00000407817 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
TCN2-203ENST00000407817 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
TCN2-203ENST00000407817 TTC21BQ7Z4L5 1316 aa15.85■□□□□ 0.13
TCN2-203ENST00000407817 APAF1O14727 1248 aa15.85■□□□□ 0.13
TCN2-203ENST00000407817 ATF3P18847 181 aa15.84■□□□□ 0.13
TCN2-203ENST00000407817 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
TCN2-203ENST00000407817 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
TCN2-203ENST00000407817 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
TCN2-203ENST00000407817 ESCO1Q5FWF5 840 aa15.84■□□□□ 0.13
TCN2-203ENST00000407817 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
TCN2-203ENST00000407817 NGEFQ8N5V2 710 aa15.84■□□□□ 0.13
TCN2-203ENST00000407817 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
TCN2-203ENST00000407817 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
TCN2-203ENST00000407817 RUNDC1Q96C34 613 aa15.83■□□□□ 0.12
TCN2-203ENST00000407817 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
TCN2-203ENST00000407817 OVOS2A0A0J9YW53 1432 aa15.83■□□□□ 0.12
TCN2-203ENST00000407817 OVOS2Q6IE36 1432 aa15.83■□□□□ 0.12
TCN2-203ENST00000407817 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
TCN2-203ENST00000407817 DIAPH1O60610 1272 aaKnown RBP15.82■□□□□ 0.12
TCN2-203ENST00000407817 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
TCN2-203ENST00000407817 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
TCN2-203ENST00000407817 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
TCN2-203ENST00000407817 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
TCN2-203ENST00000407817 PNPLA6Q8IY17 1366 aa15.81■□□□□ 0.12
TCN2-203ENST00000407817 IRX6P78412 446 aaPredicted RBP15.8■□□□□ 0.12
TCN2-203ENST00000407817 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
TCN2-203ENST00000407817 ALS2Q96Q42 1657 aa15.8■□□□□ 0.12
TCN2-203ENST00000407817 FBLN1P23142 703 aa15.8■□□□□ 0.12
TCN2-203ENST00000407817 ZNF521Q96K83 1311 aa15.8■□□□□ 0.12
TCN2-203ENST00000407817 CDK12Q9NYV4 1490 aaPredicted RBP15.79■□□□□ 0.12
TCN2-203ENST00000407817 EMILIN1Q9Y6C2 1016 aa15.79■□□□□ 0.12
TCN2-203ENST00000407817 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
TCN2-203ENST00000407817 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
TCN2-203ENST00000407817 NHSL1Q5SYE7 1610 aa15.78■□□□□ 0.12
TCN2-203ENST00000407817 FOXO3O43524 673 aa15.78■□□□□ 0.12
TCN2-203ENST00000407817 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
TCN2-203ENST00000407817 PXDNQ92626 1479 aa15.77■□□□□ 0.12
TCN2-203ENST00000407817 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.11
TCN2-203ENST00000407817 RCAN3Q9UKA8 241 aa15.77■□□□□ 0.11
TCN2-203ENST00000407817 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
TCN2-203ENST00000407817 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
TCN2-203ENST00000407817 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
TCN2-203ENST00000407817 SLAIN2Q9P270 581 aa15.76■□□□□ 0.11
TCN2-203ENST00000407817 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
TCN2-203ENST00000407817 ERICH6BQ5W0A0 696 aa15.76■□□□□ 0.11
TCN2-203ENST00000407817 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
TCN2-203ENST00000407817 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
TCN2-203ENST00000407817 PEAK1Q9H792 1746 aa15.75■□□□□ 0.11
TCN2-203ENST00000407817 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
TCN2-203ENST00000407817 PSME1Q06323 249 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
TCN2-203ENST00000407817 E9PSI1 815 aa15.73■□□□□ 0.11
TCN2-203ENST00000407817 PAK3O75914 559 aaPredicted RBP15.73■□□□□ 0.11
TCN2-203ENST00000407817 NEFMP07197 916 aa15.73■□□□□ 0.11
TCN2-203ENST00000407817 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
TCN2-203ENST00000407817 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
TCN2-203ENST00000407817 LTN1O94822 1766 aa15.72■□□□□ 0.11
TCN2-203ENST00000407817 SOX12O15370 315 aa15.72■□□□□ 0.11
TCN2-203ENST00000407817 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
TCN2-203ENST00000407817 FCHSD2O94868 740 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 NLRP6P59044 892 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms