RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 TOPAZ1Q8N9V7 1692 aa29.1■■■□□ 2.25
ITSN2-204ENST00000407704 COL14A1Q05707 1796 aaKnown RBP29.09■■■□□ 2.25
ITSN2-204ENST00000407704 SEPT12Q8IYM1 358 aa29.08■■■□□ 2.25
ITSN2-204ENST00000407704 BTG4Q9NY30 223 aa29.07■■■□□ 2.24
ITSN2-204ENST00000407704 CCDC125Q86Z20 511 aa29.03■■■□□ 2.24
ITSN2-204ENST00000407704 PHRF1Q9P1Y6 1649 aaKnown RBP29.02■■■□□ 2.24
ITSN2-204ENST00000407704 QRICH2Q9H0J4 1663 aa29.02■■■□□ 2.24
ITSN2-204ENST00000407704 ACEP12821 1306 aa29.01■■■□□ 2.23
ITSN2-204ENST00000407704 ONECUT3O60422 494 aaPredicted RBP29.01■■■□□ 2.23
ITSN2-204ENST00000407704 NUTM2GQ5VZR2 741 aa29.01■■■□□ 2.23
ITSN2-204ENST00000407704 SIN3AQ96ST3 1273 aa29.01■■■□□ 2.23
ITSN2-204ENST00000407704 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
ITSN2-204ENST00000407704 CCDC61Q9Y6R9 512 aa29■■■□□ 2.23
ITSN2-204ENST00000407704 POLR3AO14802 1390 aaPredicted RBP28.99■■■□□ 2.23
ITSN2-204ENST00000407704 A0A0G2JS52 829 aa28.98■■■□□ 2.23
ITSN2-204ENST00000407704 MYT1Q01538 1121 aa28.98■■■□□ 2.23
ITSN2-204ENST00000407704 FAM98CQ17RN3 349 aaKnown RBP28.98■■■□□ 2.23
ITSN2-204ENST00000407704 NBPF8Q3BBV2 869 aa28.98■■■□□ 2.23
ITSN2-204ENST00000407704 KRT27Q7Z3Y8 459 aa28.97■■■□□ 2.23
ITSN2-204ENST00000407704 PRDM11Q9NQV5 511 aa28.97■■■□□ 2.23
ITSN2-204ENST00000407704 CENPJQ9HC77 1338 aaPredicted RBP28.96■■■□□ 2.23
ITSN2-204ENST00000407704 BLMP54132 1417 aaPredicted RBP28.96■■■□□ 2.23
ITSN2-204ENST00000407704 PLEKHG3A1L390 1219 aa28.96■■■□□ 2.23
ITSN2-204ENST00000407704 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
ITSN2-204ENST00000407704 CABP2Q9NPB3 220 aa28.95■■■□□ 2.22
ITSN2-204ENST00000407704 KIAA0232Q92628 1395 aa28.95■■■□□ 2.22
ITSN2-204ENST00000407704 NEUROD1Q13562 356 aa28.94■■■□□ 2.22
ITSN2-204ENST00000407704 CHRNA2Q15822 529 aa28.94■■■□□ 2.22
ITSN2-204ENST00000407704 TRPM1Q7Z4N2 1603 aa28.94■■■□□ 2.22
ITSN2-204ENST00000407704 DEFB132Q7Z7B7 95 aa28.93■■■□□ 2.22
ITSN2-204ENST00000407704 ZC3H6P61129 1189 aaKnown RBP28.92■■■□□ 2.22
ITSN2-204ENST00000407704 ZRANB1Q9UGI0 708 aa28.92■■■□□ 2.22
ITSN2-204ENST00000407704 PPIP5K1Q6PFW1 1433 aa28.92■■■□□ 2.22
ITSN2-204ENST00000407704 SPATA31A5Q5VU36 1347 aa28.92■■■□□ 2.22
ITSN2-204ENST00000407704 SPATA31A7Q8IWB4 1347 aa28.92■■■□□ 2.22
ITSN2-204ENST00000407704 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
ITSN2-204ENST00000407704 NRKQ7Z2Y5 1582 aa28.88■■■□□ 2.21
ITSN2-204ENST00000407704 STRN4Q9NRL3 753 aa28.88■■■□□ 2.21
ITSN2-204ENST00000407704 SF3B2Q13435 895 aaKnown RBP28.87■■■□□ 2.21
ITSN2-204ENST00000407704 THSD7AQ9UPZ6 1657 aa28.86■■■□□ 2.21
ITSN2-204ENST00000407704 FAM182BQ5T319 152 aa28.86■■■□□ 2.21
ITSN2-204ENST00000407704 CABP1Q9NZU7 370 aa28.83■■■□□ 2.21
ITSN2-204ENST00000407704 SPATA31A1Q5TZJ5 1347 aa28.82■■■□□ 2.2
ITSN2-204ENST00000407704 ROCK2O75116 1388 aaKnown RBP28.8■■■□□ 2.2
ITSN2-204ENST00000407704 USP19O94966 1318 aa28.8■■■□□ 2.2
ITSN2-204ENST00000407704 USP35Q9P2H5 1018 aa28.8■■■□□ 2.2
ITSN2-204ENST00000407704 LMO7Q8WWI1 1683 aa28.8■■■□□ 2.2
ITSN2-204ENST00000407704 CAMTA1Q9Y6Y1 1673 aa28.8■■■□□ 2.2
ITSN2-204ENST00000407704 RGPD1P0DJD0 1748 aa28.79■■■□□ 2.2
ITSN2-204ENST00000407704 EVA1CP58658 441 aa28.78■■■□□ 2.2
ITSN2-204ENST00000407704 NLRP13Q86W25 1043 aa28.78■■■□□ 2.2
ITSN2-204ENST00000407704 EVC2Q86UK5 1308 aa28.77■■■□□ 2.2
ITSN2-204ENST00000407704 USP6P35125 1406 aa28.77■■■□□ 2.2
ITSN2-204ENST00000407704 SSH2Q76I76 1423 aa28.77■■■□□ 2.2
ITSN2-204ENST00000407704 GCP02774 474 aa28.75■■■□□ 2.19
ITSN2-204ENST00000407704 CPDO75976 1380 aa28.75■■■□□ 2.19
ITSN2-204ENST00000407704 LARP1Q6PKG0 1096 aaKnown RBP28.74■■■□□ 2.19
ITSN2-204ENST00000407704 TNS1Q9HBL0 1735 aaKnown RBP28.74■■■□□ 2.19
ITSN2-204ENST00000407704 PIK3C2AO00443 1686 aa28.74■■■□□ 2.19
ITSN2-204ENST00000407704 AKAP12Q02952 1782 aa28.73■■■□□ 2.19
ITSN2-204ENST00000407704 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
ITSN2-204ENST00000407704 BAG6P46379 1132 aa28.72■■■□□ 2.19
ITSN2-204ENST00000407704 SRCAPQ6ZRS2 3230 aa28.72■■■□□ 2.19
ITSN2-204ENST00000407704 BRD4O60885 1362 aaPredicted RBP28.72■■■□□ 2.19
ITSN2-204ENST00000407704 NLRP6P59044 892 aa28.71■■■□□ 2.19
ITSN2-204ENST00000407704 EN1Q05925 392 aaPredicted RBP28.69■■■□□ 2.18
ITSN2-204ENST00000407704 SLIT3O75094 1523 aa28.68■■■□□ 2.18
ITSN2-204ENST00000407704 COL5A2P05997 1499 aaPredicted RBP28.67■■■□□ 2.18
ITSN2-204ENST00000407704 BARGINQ6ZT62 677 aa28.67■■■□□ 2.18
ITSN2-204ENST00000407704 RGPD5Q99666 1765 aa28.65■■■□□ 2.18
ITSN2-204ENST00000407704 TCP11L2Q8N4U5 519 aa28.65■■■□□ 2.18
ITSN2-204ENST00000407704 COL18A1P39060 1754 aa28.65■■■□□ 2.18
ITSN2-204ENST00000407704 TRIM37O94972 964 aa28.64■■■□□ 2.18
ITSN2-204ENST00000407704 PSDA5PKW4 1024 aaPredicted RBP28.63■■■□□ 2.17
ITSN2-204ENST00000407704 FAM196AQ6ZSG2 479 aa28.63■■■□□ 2.17
ITSN2-204ENST00000407704 PDE3BQ13370 1112 aa28.62■■■□□ 2.17
ITSN2-204ENST00000407704 TTC21BQ7Z4L5 1316 aa28.62■■■□□ 2.17
ITSN2-204ENST00000407704 PARP4Q9UKK3 1724 aaKnown RBP28.6■■■□□ 2.17
ITSN2-204ENST00000407704 ZNF692Q9BU19 519 aaPredicted RBP28.6■■■□□ 2.17
ITSN2-204ENST00000407704 CARD11Q9BXL7 1154 aa28.6■■■□□ 2.17
ITSN2-204ENST00000407704 MON2Q7Z3U7 1717 aa28.6■■■□□ 2.17
ITSN2-204ENST00000407704 EZH2Q15910 746 aaKnown RBP28.59■■■□□ 2.17
ITSN2-204ENST00000407704 AATKQ6ZMQ8 1374 aa28.59■■■□□ 2.17
ITSN2-204ENST00000407704 SOX12O15370 315 aa28.58■■■□□ 2.17
ITSN2-204ENST00000407704 THRAP3Q9Y2W1 955 aaKnown RBP28.58■■■□□ 2.17
ITSN2-204ENST00000407704 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
ITSN2-204ENST00000407704 DISP2A7MBM2 1401 aa28.58■■■□□ 2.17
ITSN2-204ENST00000407704 CRB1P82279 1406 aa28.58■■■□□ 2.17
ITSN2-204ENST00000407704 CPSF1Q10570 1443 aaKnown RBP28.58■■■□□ 2.17
ITSN2-204ENST00000407704 AXIN2Q9Y2T1 843 aa28.57■■■□□ 2.16
ITSN2-204ENST00000407704 KTN1Q86UP2 1357 aaKnown RBP28.56■■■□□ 2.16
ITSN2-204ENST00000407704 WNK3Q9BYP7 1800 aa28.55■■■□□ 2.16
ITSN2-204ENST00000407704 TTC21AQ8NDW8 1320 aa28.54■■■□□ 2.16
ITSN2-204ENST00000407704 APBA3O96018 575 aa28.54■■■□□ 2.16
ITSN2-204ENST00000407704 SBNO2Q9Y2G9 1366 aa28.53■■■□□ 2.16
ITSN2-204ENST00000407704 TOM1L2Q6ZVM7 507 aa28.53■■■□□ 2.16
ITSN2-204ENST00000407704 CAMKK2Q96RR4 588 aa28.53■■■□□ 2.16
ITSN2-204ENST00000407704 LRP5O75197 1615 aa28.53■■■□□ 2.16
ITSN2-204ENST00000407704 LRRC37A3O60309 1634 aa28.52■■■□□ 2.16
ITSN2-204ENST00000407704 ARHGEF25Q86VW2 580 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms