RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 HSP90AA2PQ14568 343 aaPredicted RBP20.77■□□□□ 0.92
LSP1-204ENST00000406638 PANK2Q9BZ23 570 aa20.75■□□□□ 0.91
LSP1-204ENST00000406638 GZF1Q9H116 711 aaPredicted RBP20.75■□□□□ 0.91
LSP1-204ENST00000406638 EID1Q9Y6B2 187 aa20.75■□□□□ 0.91
LSP1-204ENST00000406638 PTPRUQ92729 1446 aa20.75■□□□□ 0.91
LSP1-204ENST00000406638 BECN1Q14457 450 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.74■□□□□ 0.91
LSP1-204ENST00000406638 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 ANKRD36BQ8N2N9 1353 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 PLEKHG1Q9ULL1 1385 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 IGHDP01880 384 aa20.74■□□□□ 0.91
LSP1-204ENST00000406638 HSP90AA1P07900 732 aaKnown RBP20.73■□□□□ 0.91
LSP1-204ENST00000406638 CD163L1Q9NR16 1453 aa20.73■□□□□ 0.91
LSP1-204ENST00000406638 THEMISQ8N1K5 641 aaPredicted RBP20.73■□□□□ 0.91
LSP1-204ENST00000406638 GOLGA6L3A6NEY3 463 aa20.72■□□□□ 0.91
LSP1-204ENST00000406638 FBLN1P23142 703 aa20.72■□□□□ 0.91
LSP1-204ENST00000406638 CCDC146Q8IYE0 955 aa20.72■□□□□ 0.91
LSP1-204ENST00000406638 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
LSP1-204ENST00000406638 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
LSP1-204ENST00000406638 WASLO00401 505 aaPredicted RBP20.7■□□□□ 0.9
LSP1-204ENST00000406638 SPRYD3Q8NCJ5 442 aa20.7■□□□□ 0.9
LSP1-204ENST00000406638 RBM33Q96EV2 1170 aaKnown RBP20.7■□□□□ 0.9
LSP1-204ENST00000406638 ANTXR1Q9H6X2 564 aa20.7■□□□□ 0.9
LSP1-204ENST00000406638 ARHGAP23Q9P227 1491 aa20.7■□□□□ 0.9
LSP1-204ENST00000406638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.7■□□□□ 0.9
LSP1-204ENST00000406638 CLCN1P35523 988 aa20.69■□□□□ 0.9
LSP1-204ENST00000406638 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
LSP1-204ENST00000406638 AMOTL2Q9Y2J4 779 aa20.69■□□□□ 0.9
LSP1-204ENST00000406638 CGNL1Q0VF96 1302 aa20.69■□□□□ 0.9
LSP1-204ENST00000406638 BCAR3O75815 825 aa20.69■□□□□ 0.9
LSP1-204ENST00000406638 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
LSP1-204ENST00000406638 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
LSP1-204ENST00000406638 SLIT1O75093 1534 aa20.67■□□□□ 0.9
LSP1-204ENST00000406638 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
LSP1-204ENST00000406638 MED14O60244 1454 aa20.67■□□□□ 0.9
LSP1-204ENST00000406638 FYB1O15117 783 aa20.66■□□□□ 0.9
LSP1-204ENST00000406638 RRP9O43818 475 aaKnown RBP20.66■□□□□ 0.9
LSP1-204ENST00000406638 INSRP06213 1382 aa20.66■□□□□ 0.9
LSP1-204ENST00000406638 MTHFSP49914 203 aa20.66■□□□□ 0.9
LSP1-204ENST00000406638 NUDT16Q96DE0 195 aaKnown RBP20.66■□□□□ 0.9
LSP1-204ENST00000406638 CEP170BQ9Y4F5 1589 aaPredicted RBP20.65■□□□□ 0.9
LSP1-204ENST00000406638 ADAMTSL3P82987 1691 aa20.65■□□□□ 0.9
LSP1-204ENST00000406638 ZRANB1Q9UGI0 708 aa20.65■□□□□ 0.9
LSP1-204ENST00000406638 TECPR2O15040 1411 aa20.65■□□□□ 0.9
LSP1-204ENST00000406638 FSD2A1L4K1 749 aa20.64■□□□□ 0.9
LSP1-204ENST00000406638 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
LSP1-204ENST00000406638 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
LSP1-204ENST00000406638 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
LSP1-204ENST00000406638 TBC1D2Q9BYX2 928 aa20.63■□□□□ 0.89
LSP1-204ENST00000406638 KCNA6P17658 529 aa20.62■□□□□ 0.89
LSP1-204ENST00000406638 ZNF521Q96K83 1311 aa20.62■□□□□ 0.89
LSP1-204ENST00000406638 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
LSP1-204ENST00000406638 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
LSP1-204ENST00000406638 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
LSP1-204ENST00000406638 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
LSP1-204ENST00000406638 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
LSP1-204ENST00000406638 CPS1P31327 1500 aa20.61■□□□□ 0.89
LSP1-204ENST00000406638 MCM4P33991 863 aa20.6■□□□□ 0.89
LSP1-204ENST00000406638 NME9Q86XW9 330 aa20.59■□□□□ 0.89
LSP1-204ENST00000406638 SIRT1Q96EB6 747 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 KNDC1Q76NI1 1749 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 APAF1O14727 1248 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 UPF2Q9HAU5 1272 aaKnown RBP20.57■□□□□ 0.88
LSP1-204ENST00000406638 CCDC61Q9Y6R9 512 aa20.57■□□□□ 0.88
LSP1-204ENST00000406638 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
LSP1-204ENST00000406638 PANK1Q8TE04 598 aa20.56■□□□□ 0.88
LSP1-204ENST00000406638 ATP7BP35670 1465 aa20.55■□□□□ 0.88
LSP1-204ENST00000406638 TRAK2O60296 914 aa20.55■□□□□ 0.88
LSP1-204ENST00000406638 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
LSP1-204ENST00000406638 USP32Q8NFA0 1604 aa20.55■□□□□ 0.88
LSP1-204ENST00000406638 TBC1D32Q96NH3 1257 aa20.55■□□□□ 0.88
LSP1-204ENST00000406638 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
LSP1-204ENST00000406638 POLR3AO14802 1390 aaPredicted RBP20.54■□□□□ 0.88
LSP1-204ENST00000406638 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
LSP1-204ENST00000406638 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
LSP1-204ENST00000406638 ESPNB1AK53 854 aa20.53■□□□□ 0.88
LSP1-204ENST00000406638 MYH16Q9H6N6 1097 aa20.53■□□□□ 0.88
LSP1-204ENST00000406638 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
LSP1-204ENST00000406638 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
LSP1-204ENST00000406638 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
LSP1-204ENST00000406638 CANXP27824 592 aaKnown RBP20.52■□□□□ 0.88
LSP1-204ENST00000406638 MRE11P49959 708 aa20.52■□□□□ 0.88
LSP1-204ENST00000406638 CPSF1Q10570 1443 aaKnown RBP20.52■□□□□ 0.88
LSP1-204ENST00000406638 NEUROD2Q15784 382 aa20.52■□□□□ 0.87
LSP1-204ENST00000406638 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
LSP1-204ENST00000406638 NSD2O96028 1365 aa20.5■□□□□ 0.87
LSP1-204ENST00000406638 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
LSP1-204ENST00000406638 ACEP12821 1306 aa20.5■□□□□ 0.87
LSP1-204ENST00000406638 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
LSP1-204ENST00000406638 EMILIN1Q9Y6C2 1016 aa20.48■□□□□ 0.87
LSP1-204ENST00000406638 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
LSP1-204ENST00000406638 SOX12O15370 315 aa20.47■□□□□ 0.87
LSP1-204ENST00000406638 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
LSP1-204ENST00000406638 HSPA2P54652 639 aa20.47■□□□□ 0.87
LSP1-204ENST00000406638 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms