RNA–Protein interactions for RNA: ENST00000405727.6

ARFIP1-203, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFIP1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-203ENST00000405727 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.62
ARFIP1-203ENST00000405727 SSH2Q76I76 1423 aa18.89■□□□□ 0.61
ARFIP1-203ENST00000405727 ZRANB1Q9UGI0 708 aa18.89■□□□□ 0.61
ARFIP1-203ENST00000405727 SHPRHQ149N8 1683 aa18.88■□□□□ 0.61
ARFIP1-203ENST00000405727 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
ARFIP1-203ENST00000405727 ADAMTS8Q9UP79 889 aa18.87■□□□□ 0.61
ARFIP1-203ENST00000405727 CFAP53Q96M91 514 aa18.86■□□□□ 0.61
ARFIP1-203ENST00000405727 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
ARFIP1-203ENST00000405727 COG3Q96JB2 828 aa18.85■□□□□ 0.61
ARFIP1-203ENST00000405727 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
ARFIP1-203ENST00000405727 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
ARFIP1-203ENST00000405727 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
ARFIP1-203ENST00000405727 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
ARFIP1-203ENST00000405727 TTC21AQ8NDW8 1320 aa18.84■□□□□ 0.61
ARFIP1-203ENST00000405727 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
ARFIP1-203ENST00000405727 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
ARFIP1-203ENST00000405727 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.6
ARFIP1-203ENST00000405727 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
ARFIP1-203ENST00000405727 PIK3C2AO00443 1686 aa18.83■□□□□ 0.6
ARFIP1-203ENST00000405727 MAP2P11137 1827 aaKnown RBP18.82■□□□□ 0.6
ARFIP1-203ENST00000405727 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
ARFIP1-203ENST00000405727 DCCP43146 1447 aa18.81■□□□□ 0.6
ARFIP1-203ENST00000405727 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
ARFIP1-203ENST00000405727 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
ARFIP1-203ENST00000405727 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
ARFIP1-203ENST00000405727 FBLN1P23142 703 aa18.8■□□□□ 0.6
ARFIP1-203ENST00000405727 POLKQ9UBT6 870 aa18.8■□□□□ 0.6
ARFIP1-203ENST00000405727 LRRC7Q96NW7 1537 aa18.79■□□□□ 0.6
ARFIP1-203ENST00000405727 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
ARFIP1-203ENST00000405727 ATF3P18847 181 aa18.79■□□□□ 0.6
ARFIP1-203ENST00000405727 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
ARFIP1-203ENST00000405727 MST1RQ04912 1400 aa18.79■□□□□ 0.6
ARFIP1-203ENST00000405727 ORAI2Q96SN7 254 aa18.78■□□□□ 0.6
ARFIP1-203ENST00000405727 USP31Q70CQ4 1352 aa18.78■□□□□ 0.6
ARFIP1-203ENST00000405727 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
ARFIP1-203ENST00000405727 USP54Q70EL1 1684 aa18.77■□□□□ 0.6
ARFIP1-203ENST00000405727 MSH6P52701 1360 aa18.77■□□□□ 0.6
ARFIP1-203ENST00000405727 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.59
ARFIP1-203ENST00000405727 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.59
ARFIP1-203ENST00000405727 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
ARFIP1-203ENST00000405727 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
ARFIP1-203ENST00000405727 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
ARFIP1-203ENST00000405727 PPM1GO15355 546 aaPredicted RBP18.75■□□□□ 0.59
ARFIP1-203ENST00000405727 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
ARFIP1-203ENST00000405727 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
ARFIP1-203ENST00000405727 PSME1Q06323 249 aa18.74■□□□□ 0.59
ARFIP1-203ENST00000405727 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
ARFIP1-203ENST00000405727 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
ARFIP1-203ENST00000405727 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
ARFIP1-203ENST00000405727 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
ARFIP1-203ENST00000405727 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
ARFIP1-203ENST00000405727 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
ARFIP1-203ENST00000405727 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 FOXO3O43524 673 aa18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 NLRP6P59044 892 aa18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 PEAK1Q9H792 1746 aa18.71■□□□□ 0.59
ARFIP1-203ENST00000405727 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.58
ARFIP1-203ENST00000405727 SOX12O15370 315 aa18.71■□□□□ 0.58
ARFIP1-203ENST00000405727 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.58
ARFIP1-203ENST00000405727 APAF1O14727 1248 aa18.69■□□□□ 0.58
ARFIP1-203ENST00000405727 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
ARFIP1-203ENST00000405727 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
ARFIP1-203ENST00000405727 IQSEC2Q5JU85 1478 aa18.69■□□□□ 0.58
ARFIP1-203ENST00000405727 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
ARFIP1-203ENST00000405727 MAP3K19Q56UN5 1328 aa18.66■□□□□ 0.58
ARFIP1-203ENST00000405727 IL13P35225 146 aa18.66■□□□□ 0.58
ARFIP1-203ENST00000405727 PDE3BQ13370 1112 aa18.66■□□□□ 0.58
ARFIP1-203ENST00000405727 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
ARFIP1-203ENST00000405727 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
ARFIP1-203ENST00000405727 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
ARFIP1-203ENST00000405727 NFAT5O94916 1531 aa18.64■□□□□ 0.57
ARFIP1-203ENST00000405727 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
ARFIP1-203ENST00000405727 TCP11L2Q8N4U5 519 aa18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 CDCA7LQ96GN5 454 aa18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 FLT4P35916 1363 aa18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 LTN1O94822 1766 aa18.62■□□□□ 0.57
ARFIP1-203ENST00000405727 EIF4A2Q14240 407 aaKnown RBP18.61■□□□□ 0.57
ARFIP1-203ENST00000405727 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
ARFIP1-203ENST00000405727 NPHP3Q7Z494 1330 aa18.61■□□□□ 0.57
ARFIP1-203ENST00000405727 SLIT3O75094 1523 aa18.61■□□□□ 0.57
ARFIP1-203ENST00000405727 PXDNQ92626 1479 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 AMPHP49418 695 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 BRINP3Q76B58 766 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 SLAIN2Q9P270 581 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 FCHSD2O94868 740 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 PNNQ9H307 717 aaKnown RBP18.6■□□□□ 0.57
ARFIP1-203ENST00000405727 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
ARFIP1-203ENST00000405727 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
ARFIP1-203ENST00000405727 MAPK8IP3Q9UPT6 1336 aa18.59■□□□□ 0.57
ARFIP1-203ENST00000405727 USP19O94966 1318 aa18.58■□□□□ 0.57
ARFIP1-203ENST00000405727 HMOX1P09601 288 aa18.58■□□□□ 0.56
ARFIP1-203ENST00000405727 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
ARFIP1-203ENST00000405727 LTBP4Q8N2S1 1624 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms