RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 BRD4O60885 1362 aaPredicted RBP26.72■■□□□ 1.87
SMTN-204ENST00000404574 TTC21AQ8NDW8 1320 aa26.71■■□□□ 1.87
SMTN-204ENST00000404574 BRINP3Q76B58 766 aa26.7■■□□□ 1.86
SMTN-204ENST00000404574 MYBBP1AQ9BQG0 1328 aaKnown RBP26.69■■□□□ 1.86
SMTN-204ENST00000404574 SSH2Q76I76 1423 aa26.69■■□□□ 1.86
SMTN-204ENST00000404574 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
SMTN-204ENST00000404574 PAK3O75914 559 aaPredicted RBP26.69■■□□□ 1.86
SMTN-204ENST00000404574 NME9Q86XW9 330 aa26.69■■□□□ 1.86
SMTN-204ENST00000404574 NPHP3Q7Z494 1330 aa26.68■■□□□ 1.86
SMTN-204ENST00000404574 KRT28Q7Z3Y7 464 aa26.67■■□□□ 1.86
SMTN-204ENST00000404574 NRKQ7Z2Y5 1582 aa26.66■■□□□ 1.86
SMTN-204ENST00000404574 COG3Q96JB2 828 aa26.65■■□□□ 1.86
SMTN-204ENST00000404574 XPCQ01831 940 aaPredicted RBP26.65■■□□□ 1.86
SMTN-204ENST00000404574 KIF20BQ96Q89 1820 aa26.64■■□□□ 1.86
SMTN-204ENST00000404574 TOM1O60784 492 aa26.63■■□□□ 1.85
SMTN-204ENST00000404574 TNNT2P45379 298 aaPredicted RBP26.63■■□□□ 1.85
SMTN-204ENST00000404574 NLRP13Q86W25 1043 aa26.62■■□□□ 1.85
SMTN-204ENST00000404574 ABTB2Q8N961 1025 aa26.62■■□□□ 1.85
SMTN-204ENST00000404574 PPP2R1AP30153 589 aa26.62■■□□□ 1.85
SMTN-204ENST00000404574 DDX17Q92841 729 aaKnown RBP26.61■■□□□ 1.85
SMTN-204ENST00000404574 ZRANB1Q9UGI0 708 aa26.61■■□□□ 1.85
SMTN-204ENST00000404574 CERKQ8TCT0 537 aa26.6■■□□□ 1.85
SMTN-204ENST00000404574 IQSEC2Q5JU85 1478 aa26.6■■□□□ 1.85
SMTN-204ENST00000404574 NLRP6P59044 892 aa26.59■■□□□ 1.85
SMTN-204ENST00000404574 MRS2Q9HD23 443 aa26.58■■□□□ 1.85
SMTN-204ENST00000404574 ANKRD26Q9UPS8 1709 aa26.58■■□□□ 1.85
SMTN-204ENST00000404574 USP31Q70CQ4 1352 aa26.57■■□□□ 1.84
SMTN-204ENST00000404574 LMOD2Q6P5Q4 547 aa26.56■■□□□ 1.84
SMTN-204ENST00000404574 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
SMTN-204ENST00000404574 SBNO1A3KN83 1393 aa26.55■■□□□ 1.84
SMTN-204ENST00000404574 UBAP1LF5GYI3 381 aa26.55■■□□□ 1.84
SMTN-204ENST00000404574 NUTM2GQ5VZR2 741 aa26.55■■□□□ 1.84
SMTN-204ENST00000404574 OVOS2A0A0J9YW53 1432 aa26.55■■□□□ 1.84
SMTN-204ENST00000404574 OVOS2Q6IE36 1432 aa26.55■■□□□ 1.84
SMTN-204ENST00000404574 CCDC184Q52MB2 194 aa26.53■■□□□ 1.84
SMTN-204ENST00000404574 PIK3C2AO00443 1686 aa26.53■■□□□ 1.84
SMTN-204ENST00000404574 PXDNQ92626 1479 aa26.53■■□□□ 1.84
SMTN-204ENST00000404574 SOS2Q07890 1332 aaPredicted RBP26.52■■□□□ 1.84
SMTN-204ENST00000404574 PIP4K2BP78356 416 aa26.51■■□□□ 1.83
SMTN-204ENST00000404574 TRPM3Q9HCF6 1732 aaPredicted RBP26.51■■□□□ 1.83
SMTN-204ENST00000404574 ROBO1Q9Y6N7 1651 aa26.5■■□□□ 1.83
SMTN-204ENST00000404574 MTHFSP49914 203 aa26.5■■□□□ 1.83
SMTN-204ENST00000404574 SPATA31A3Q5VYP0 1347 aa26.49■■□□□ 1.83
SMTN-204ENST00000404574 AATKQ6ZMQ8 1374 aa26.49■■□□□ 1.83
SMTN-204ENST00000404574 TNS3Q68CZ2 1445 aa26.49■■□□□ 1.83
SMTN-204ENST00000404574 ARHGEF10O15013 1369 aa26.47■■□□□ 1.83
SMTN-204ENST00000404574 SOX12O15370 315 aa26.47■■□□□ 1.83
SMTN-204ENST00000404574 NHSL1Q5SYE7 1610 aa26.46■■□□□ 1.83
SMTN-204ENST00000404574 FBLN1P23142 703 aa26.46■■□□□ 1.83
SMTN-204ENST00000404574 CFAP53Q96M91 514 aa26.46■■□□□ 1.83
SMTN-204ENST00000404574 KCNH5Q8NCM2 988 aa26.45■■□□□ 1.82
SMTN-204ENST00000404574 POLKQ9UBT6 870 aa26.45■■□□□ 1.82
SMTN-204ENST00000404574 PPM1GO15355 546 aaPredicted RBP26.44■■□□□ 1.82
SMTN-204ENST00000404574 USP54Q70EL1 1684 aa26.43■■□□□ 1.82
SMTN-204ENST00000404574 ALS2Q96Q42 1657 aa26.43■■□□□ 1.82
SMTN-204ENST00000404574 RRS1Q15050 365 aaKnown RBP26.43■■□□□ 1.82
SMTN-204ENST00000404574 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
SMTN-204ENST00000404574 LRRC59Q96AG4 307 aaKnown RBP26.42■■□□□ 1.82
SMTN-204ENST00000404574 AHDC1Q5TGY3 1603 aaPredicted RBP26.41■■□□□ 1.82
SMTN-204ENST00000404574 EMILIN1Q9Y6C2 1016 aa26.41■■□□□ 1.82
SMTN-204ENST00000404574 GCP02774 474 aa26.4■■□□□ 1.82
SMTN-204ENST00000404574 FAM9BQ8IZU0 186 aa26.4■■□□□ 1.82
SMTN-204ENST00000404574 USP19O94966 1318 aa26.4■■□□□ 1.82
SMTN-204ENST00000404574 PNISRQ8TF01 805 aaKnown RBP26.39■■□□□ 1.82
SMTN-204ENST00000404574 MARF1Q9Y4F3 1742 aaKnown RBP26.38■■□□□ 1.81
SMTN-204ENST00000404574 MAP2P11137 1827 aaKnown RBP26.38■■□□□ 1.81
SMTN-204ENST00000404574 SMG6Q86US8 1419 aaKnown RBP26.36■■□□□ 1.81
SMTN-204ENST00000404574 MAP3K19Q56UN5 1328 aa26.36■■□□□ 1.81
SMTN-204ENST00000404574 AMPHP49418 695 aa26.36■■□□□ 1.81
SMTN-204ENST00000404574 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
SMTN-204ENST00000404574 SLIT3O75094 1523 aa26.35■■□□□ 1.81
SMTN-204ENST00000404574 PNPLA6Q8IY17 1366 aa26.34■■□□□ 1.81
SMTN-204ENST00000404574 CABLES1Q8TDN4 633 aa26.34■■□□□ 1.81
SMTN-204ENST00000404574 INSRP06213 1382 aa26.33■■□□□ 1.8
SMTN-204ENST00000404574 CDK12Q9NYV4 1490 aaPredicted RBP26.32■■□□□ 1.8
SMTN-204ENST00000404574 PHLPP1O60346 1717 aa26.32■■□□□ 1.8
SMTN-204ENST00000404574 HAP1P54257 671 aaPredicted RBP26.32■■□□□ 1.8
SMTN-204ENST00000404574 NUDCQ9Y266 331 aa26.32■■□□□ 1.8
SMTN-204ENST00000404574 NFAT5O94916 1531 aa26.32■■□□□ 1.8
SMTN-204ENST00000404574 MED1Q15648 1581 aaPredicted RBP26.32■■□□□ 1.8
SMTN-204ENST00000404574 DIAPH1O60610 1272 aaKnown RBP26.31■■□□□ 1.8
SMTN-204ENST00000404574 KIF24Q5T7B8 1368 aa26.31■■□□□ 1.8
SMTN-204ENST00000404574 FLT4P35916 1363 aa26.3■■□□□ 1.8
SMTN-204ENST00000404574 ZBTB7CA1YPR0 619 aa26.3■■□□□ 1.8
SMTN-204ENST00000404574 ZC3H6P61129 1189 aaKnown RBP26.28■■□□□ 1.8
SMTN-204ENST00000404574 ARHGEF25Q86VW2 580 aa26.28■■□□□ 1.8
SMTN-204ENST00000404574 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
SMTN-204ENST00000404574 RTL1A6NKG5 1358 aa26.27■■□□□ 1.8
SMTN-204ENST00000404574 HOXC9P31274 260 aa26.27■■□□□ 1.8
SMTN-204ENST00000404574 HSP90AB2PQ58FF8 381 aa26.27■■□□□ 1.8
SMTN-204ENST00000404574 COL16A1Q07092 1604 aaPredicted RBP26.27■■□□□ 1.8
SMTN-204ENST00000404574 ADAMTS8Q9UP79 889 aa26.26■■□□□ 1.79
SMTN-204ENST00000404574 COL3A1P02461 1466 aaPredicted RBP26.26■■□□□ 1.79
SMTN-204ENST00000404574 IP6K1Q92551 441 aa26.25■■□□□ 1.79
SMTN-204ENST00000404574 PHRF1Q9P1Y6 1649 aaKnown RBP26.25■■□□□ 1.79
SMTN-204ENST00000404574 U2SURPO15042 1029 aaKnown RBP26.25■■□□□ 1.79
SMTN-204ENST00000404574 PEAK1Q9H792 1746 aa26.23■■□□□ 1.79
SMTN-204ENST00000404574 U2AF1L5P0DN76 240 aaPredicted RBP26.23■■□□□ 1.79
SMTN-204ENST00000404574 U2AF1Q01081 240 aaKnown RBP eCLIP26.23■■□□□ 1.79
SMTN-204ENST00000404574 IL13P35225 146 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms