RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 ZNF335Q9H4Z2 1342 aaPredicted RBP31.03■■■□□ 2.56
TRIOBP-203ENST00000403663 HDGFL2Q7Z4V5 671 aaPredicted RBP31.03■■■□□ 2.56
TRIOBP-203ENST00000403663 ANO8Q9HCE9 1232 aaPredicted RBP31.02■■■□□ 2.56
TRIOBP-203ENST00000403663 TMEM94Q12767 1356 aa31.01■■■□□ 2.56
TRIOBP-203ENST00000403663 MON2Q7Z3U7 1717 aa31.01■■■□□ 2.55
TRIOBP-203ENST00000403663 CGNL1Q0VF96 1302 aa31■■■□□ 2.55
TRIOBP-203ENST00000403663 PMFBP1Q8TBY8 1022 aa30.99■■■□□ 2.55
TRIOBP-203ENST00000403663 XIRP1Q702N8 1843 aaKnown RBP30.99■■■□□ 2.55
TRIOBP-203ENST00000403663 ACEP12821 1306 aa30.98■■■□□ 2.55
TRIOBP-203ENST00000403663 PLEKHG3A1L390 1219 aa30.97■■■□□ 2.55
TRIOBP-203ENST00000403663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.97■■■□□ 2.55
TRIOBP-203ENST00000403663 ANKARQ7Z5J8 1434 aa30.97■■■□□ 2.55
TRIOBP-203ENST00000403663 KIF20BQ96Q89 1820 aa30.95■■■□□ 2.55
TRIOBP-203ENST00000403663 GGNBP2Q9H3C7 697 aa30.95■■■□□ 2.54
TRIOBP-203ENST00000403663 FYB1O15117 783 aa30.94■■■□□ 2.54
TRIOBP-203ENST00000403663 PPP2R1AP30153 589 aa30.94■■■□□ 2.54
TRIOBP-203ENST00000403663 TNNT2P45379 298 aaPredicted RBP30.92■■■□□ 2.54
TRIOBP-203ENST00000403663 NLRP13Q86W25 1043 aa30.92■■■□□ 2.54
TRIOBP-203ENST00000403663 IL27Q8NEV9 243 aa30.91■■■□□ 2.54
TRIOBP-203ENST00000403663 EDC4Q6P2E9 1401 aaKnown RBP30.91■■■□□ 2.54
TRIOBP-203ENST00000403663 NRKQ7Z2Y5 1582 aa30.91■■■□□ 2.54
TRIOBP-203ENST00000403663 PNISRQ8TF01 805 aaKnown RBP30.91■■■□□ 2.54
TRIOBP-203ENST00000403663 ANKRD26Q9UPS8 1709 aa30.91■■■□□ 2.54
TRIOBP-203ENST00000403663 MORC1Q86VD1 984 aa30.9■■■□□ 2.54
TRIOBP-203ENST00000403663 C19orf44Q9H6X5 657 aa30.9■■■□□ 2.54
TRIOBP-203ENST00000403663 LRRC7Q96NW7 1537 aa30.9■■■□□ 2.54
TRIOBP-203ENST00000403663 BRD4O60885 1362 aaPredicted RBP30.9■■■□□ 2.54
TRIOBP-203ENST00000403663 SALL2Q9Y467 1007 aaPredicted RBP30.89■■■□□ 2.53
TRIOBP-203ENST00000403663 POLR3AO14802 1390 aaPredicted RBP30.88■■■□□ 2.53
TRIOBP-203ENST00000403663 NME9Q86XW9 330 aa30.87■■■□□ 2.53
TRIOBP-203ENST00000403663 ZRANB1Q9UGI0 708 aa30.87■■■□□ 2.53
TRIOBP-203ENST00000403663 USP6P35125 1406 aa30.87■■■□□ 2.53
TRIOBP-203ENST00000403663 NSD2O96028 1365 aa30.87■■■□□ 2.53
TRIOBP-203ENST00000403663 NGDNQ8NEJ9 315 aaKnown RBP30.86■■■□□ 2.53
TRIOBP-203ENST00000403663 ZNF692Q9BU19 519 aaPredicted RBP30.86■■■□□ 2.53
TRIOBP-203ENST00000403663 SENP3-EIF4A1A0A087X0R7 540 aa30.86■■■□□ 2.53
TRIOBP-203ENST00000403663 DMRT2Q9Y5R5 561 aa30.86■■■□□ 2.53
TRIOBP-203ENST00000403663 ORAI2Q96SN7 254 aa30.85■■■□□ 2.53
TRIOBP-203ENST00000403663 ESCO1Q5FWF5 840 aa30.84■■■□□ 2.53
TRIOBP-203ENST00000403663 TCERG1O14776 1098 aaKnown RBP30.84■■■□□ 2.53
TRIOBP-203ENST00000403663 PHF8Q9UPP1 1060 aa30.83■■■□□ 2.53
TRIOBP-203ENST00000403663 NCOA3Q9Y6Q9 1424 aa30.83■■■□□ 2.53
TRIOBP-203ENST00000403663 NPM2Q86SE8 214 aaKnown RBP30.82■■■□□ 2.53
TRIOBP-203ENST00000403663 USP35Q9P2H5 1018 aa30.82■■■□□ 2.53
TRIOBP-203ENST00000403663 SSH2Q76I76 1423 aa30.82■■■□□ 2.52
TRIOBP-203ENST00000403663 TTC21BQ7Z4L5 1316 aa30.81■■■□□ 2.52
TRIOBP-203ENST00000403663 C1orf167Q5SNV9 1468 aa30.8■■■□□ 2.52
TRIOBP-203ENST00000403663 MST1RQ04912 1400 aa30.79■■■□□ 2.52
TRIOBP-203ENST00000403663 ATF3P18847 181 aa30.79■■■□□ 2.52
TRIOBP-203ENST00000403663 RRP1P56182 461 aaKnown RBP30.79■■■□□ 2.52
TRIOBP-203ENST00000403663 NEFMP07197 916 aa30.79■■■□□ 2.52
TRIOBP-203ENST00000403663 FBLN1P23142 703 aa30.79■■■□□ 2.52
TRIOBP-203ENST00000403663 PDE4AP27815 886 aa30.78■■■□□ 2.52
TRIOBP-203ENST00000403663 DCCP43146 1447 aa30.77■■■□□ 2.52
TRIOBP-203ENST00000403663 MSH6P52701 1360 aa30.77■■■□□ 2.52
TRIOBP-203ENST00000403663 EXOC6Q8TAG9 804 aa30.76■■■□□ 2.52
TRIOBP-203ENST00000403663 LAS1LQ9Y4W2 734 aaKnown RBP30.76■■■□□ 2.52
TRIOBP-203ENST00000403663 BACH2Q9BYV9 841 aa30.74■■■□□ 2.51
TRIOBP-203ENST00000403663 PIK3C2AO00443 1686 aa30.73■■■□□ 2.51
TRIOBP-203ENST00000403663 RTN4Q9NQC3 1192 aaKnown RBP30.72■■■□□ 2.51
TRIOBP-203ENST00000403663 FOXO3O43524 673 aa30.72■■■□□ 2.51
TRIOBP-203ENST00000403663 MTHFSP49914 203 aa30.72■■■□□ 2.51
TRIOBP-203ENST00000403663 XPCQ01831 940 aaPredicted RBP30.71■■■□□ 2.51
TRIOBP-203ENST00000403663 CADPS2Q86UW7 1296 aa30.71■■■□□ 2.51
TRIOBP-203ENST00000403663 MS4A1P11836 297 aa30.7■■■□□ 2.51
TRIOBP-203ENST00000403663 MAP2P11137 1827 aaKnown RBP30.7■■■□□ 2.5
TRIOBP-203ENST00000403663 COG3Q96JB2 828 aa30.68■■■□□ 2.5
TRIOBP-203ENST00000403663 OVOS2A0A0J9YW53 1432 aa30.68■■■□□ 2.5
TRIOBP-203ENST00000403663 OVOS2Q6IE36 1432 aa30.68■■■□□ 2.5
TRIOBP-203ENST00000403663 PPM1GO15355 546 aaPredicted RBP30.67■■■□□ 2.5
TRIOBP-203ENST00000403663 DDX17Q92841 729 aaKnown RBP30.67■■■□□ 2.5
TRIOBP-203ENST00000403663 KIF1AQ12756 1690 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 TTC21AQ8NDW8 1320 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 MARF1Q9Y4F3 1742 aaKnown RBP30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 LTBP4Q8N2S1 1624 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 PSME1Q06323 249 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 NUTM2GQ5VZR2 741 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 RCAN3Q9UKA8 241 aa30.66■■■□□ 2.5
TRIOBP-203ENST00000403663 SHPRHQ149N8 1683 aa30.64■■■□□ 2.49
TRIOBP-203ENST00000403663 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
TRIOBP-203ENST00000403663 POLKQ9UBT6 870 aa30.61■■■□□ 2.49
TRIOBP-203ENST00000403663 TRPM3Q9HCF6 1732 aaPredicted RBP30.61■■■□□ 2.49
TRIOBP-203ENST00000403663 ADAMTS8Q9UP79 889 aa30.61■■■□□ 2.49
TRIOBP-203ENST00000403663 SOX12O15370 315 aa30.6■■■□□ 2.49
TRIOBP-203ENST00000403663 ABTB2Q8N961 1025 aa30.59■■■□□ 2.49
TRIOBP-203ENST00000403663 EMILIN1Q9Y6C2 1016 aa30.59■■■□□ 2.49
TRIOBP-203ENST00000403663 RRS1Q15050 365 aaKnown RBP30.59■■■□□ 2.49
TRIOBP-203ENST00000403663 NLRP6P59044 892 aa30.58■■■□□ 2.49
TRIOBP-203ENST00000403663 SLAIN2Q9P270 581 aa30.58■■■□□ 2.49
TRIOBP-203ENST00000403663 USP31Q70CQ4 1352 aa30.57■■■□□ 2.48
TRIOBP-203ENST00000403663 KRT28Q7Z3Y7 464 aa30.57■■■□□ 2.48
TRIOBP-203ENST00000403663 BRINP3Q76B58 766 aa30.56■■■□□ 2.48
TRIOBP-203ENST00000403663 COL3A1P02461 1466 aaPredicted RBP30.56■■■□□ 2.48
TRIOBP-203ENST00000403663 USP54Q70EL1 1684 aa30.55■■■□□ 2.48
TRIOBP-203ENST00000403663 AATKQ6ZMQ8 1374 aa30.55■■■□□ 2.48
TRIOBP-203ENST00000403663 WDR43Q15061 677 aaKnown RBP eCLIP30.55■■■□□ 2.48
TRIOBP-203ENST00000403663 PDE3BQ13370 1112 aa30.53■■■□□ 2.48
TRIOBP-203ENST00000403663 CFAP53Q96M91 514 aa30.51■■■□□ 2.48
TRIOBP-203ENST00000403663 PEAK1Q9H792 1746 aa30.51■■■□□ 2.47
TRIOBP-203ENST00000403663 PNPLA6Q8IY17 1366 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms